Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 MTND4LP20-201ENST00000402379 270 ntBASIC4.07□□□□□ -1.76
VPS33AQ96AX1 RNU2-28P-201ENST00000410457 189 ntBASIC4.07□□□□□ -1.76
VPS33AQ96AX1 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC4.07□□□□□ -1.76
VPS33AQ96AX1 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC4.07□□□□□ -1.76
VPS33AQ96AX1 MTND2P16-201ENST00000419987 799 ntBASIC4.07□□□□□ -1.76
VPS33AQ96AX1 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC4.07□□□□□ -1.76
VPS33AQ96AX1 AC092647.1-201ENST00000420654 287 ntBASIC4.07□□□□□ -1.76
VPS33AQ96AX1 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC4.07□□□□□ -1.76
VPS33AQ96AX1 UQCRBP1-201ENST00000421129 336 ntBASIC4.07□□□□□ -1.76
VPS33AQ96AX1 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC4.07□□□□□ -1.76
VPS33AQ96AX1 AC006548.1-201ENST00000427470 102 ntBASIC4.07□□□□□ -1.76
VPS33AQ96AX1 HIGD1AP12-201ENST00000427832 281 ntBASIC4.07□□□□□ -1.76
VPS33AQ96AX1 LAMTOR3P1-201ENST00000428620 370 ntBASIC4.07□□□□□ -1.76
VPS33AQ96AX1 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC4.07□□□□□ -1.76
VPS33AQ96AX1 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC4.07□□□□□ -1.76
VPS33AQ96AX1 AL359265.2-201ENST00000434367 631 ntBASIC4.07□□□□□ -1.76
VPS33AQ96AX1 RPL23AP89-201ENST00000439324 255 ntBASIC4.07□□□□□ -1.76
VPS33AQ96AX1 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC4.07□□□□□ -1.76
VPS33AQ96AX1 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC4.07□□□□□ -1.76
VPS33AQ96AX1 AC104164.3-201ENST00000467363 1258 ntBASIC4.07□□□□□ -1.76
VPS33AQ96AX1 RN7SL354P-201ENST00000469282 294 ntBASIC4.07□□□□□ -1.76
VPS33AQ96AX1 AC074386.1-201ENST00000476560 767 ntBASIC4.07□□□□□ -1.76
VPS33AQ96AX1 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC4.07□□□□□ -1.76
VPS33AQ96AX1 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC4.07□□□□□ -1.76
VPS33AQ96AX1 IGHV3-32-201ENST00000519182 355 ntBASIC4.07□□□□□ -1.76
VPS33AQ96AX1 AC087808.1-201ENST00000520501 361 ntBASIC4.07□□□□□ -1.76
VPS33AQ96AX1 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC4.07□□□□□ -1.76
VPS33AQ96AX1 AP004242.1-201ENST00000533701 349 ntBASIC4.07□□□□□ -1.76
VPS33AQ96AX1 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC4.07□□□□□ -1.76
VPS33AQ96AX1 GTF2IP8-201ENST00000560687 584 ntBASIC4.07□□□□□ -1.76
VPS33AQ96AX1 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC4.07□□□□□ -1.76
VPS33AQ96AX1 AC069061.3-201ENST00000582254 823 ntBASIC4.07□□□□□ -1.76
VPS33AQ96AX1 SNRPGP15-201ENST00000600149 222 ntBASIC4.07□□□□□ -1.76
VPS33AQ96AX1 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC4.07□□□□□ -1.76
VPS33AQ96AX1 AC091057.3-201ENST00000602684 733 ntBASIC4.07□□□□□ -1.76
VPS33AQ96AX1 AL121895.2-201ENST00000619558 447 ntBASIC4.07□□□□□ -1.76
VPS33AQ96AX1 CR381572.1-201ENST00000625098 102 ntBASIC4.07□□□□□ -1.76
VPS33AQ96AX1 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC4.07□□□□□ -1.76
VPS33AQ96AX1 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC4.07□□□□□ -1.76
VPS33AQ96AX1 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.07□□□□□ -1.76
VPS33AQ96AX1 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
VPS33AQ96AX1 MAPK10-373ENST00000641983 6772 ntBASIC4.06□□□□□ -1.76
VPS33AQ96AX1 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
VPS33AQ96AX1 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4.06□□□□□ -1.76
VPS33AQ96AX1 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
VPS33AQ96AX1 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.06□□□□□ -1.76
VPS33AQ96AX1 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC4.06□□□□□ -1.76
VPS33AQ96AX1 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC4.06□□□□□ -1.76
VPS33AQ96AX1 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
VPS33AQ96AX1 MIR331-201ENST00000362302 94 ntBASIC4.06□□□□□ -1.76
VPS33AQ96AX1 SNORA7.2-201ENST00000364446 145 ntBASIC4.06□□□□□ -1.76
VPS33AQ96AX1 RNA5SP189-201ENST00000364920 115 ntBASIC4.06□□□□□ -1.76
VPS33AQ96AX1 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
VPS33AQ96AX1 SNORA40.2-201ENST00000390847 128 ntBASIC4.06□□□□□ -1.76
VPS33AQ96AX1 AL138878.1-201ENST00000405131 347 ntBASIC4.06□□□□□ -1.76
VPS33AQ96AX1 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC4.06□□□□□ -1.76
VPS33AQ96AX1 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC4.06□□□□□ -1.76
VPS33AQ96AX1 FNDC3CP-201ENST00000420795 1155 ntBASIC4.06□□□□□ -1.76
VPS33AQ96AX1 AL590762.4-201ENST00000425885 253 ntBASIC4.06□□□□□ -1.76
VPS33AQ96AX1 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC4.06□□□□□ -1.76
VPS33AQ96AX1 AL035410.1-201ENST00000427409 427 ntBASIC4.06□□□□□ -1.76
VPS33AQ96AX1 AL360081.1-201ENST00000428299 555 ntBASIC4.06□□□□□ -1.76
VPS33AQ96AX1 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.06□□□□□ -1.76
VPS33AQ96AX1 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC4.06□□□□□ -1.76
VPS33AQ96AX1 RPL12P3-201ENST00000440080 396 ntBASIC4.06□□□□□ -1.76
VPS33AQ96AX1 AL031313.1-201ENST00000448435 256 ntBASIC4.06□□□□□ -1.76
VPS33AQ96AX1 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC4.06□□□□□ -1.76
VPS33AQ96AX1 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC4.06□□□□□ -1.76
VPS33AQ96AX1 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC4.06□□□□□ -1.76
VPS33AQ96AX1 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC4.06□□□□□ -1.76
VPS33AQ96AX1 RNA5SP309-201ENST00000516670 106 ntBASIC4.06□□□□□ -1.76
VPS33AQ96AX1 SCARNA1-201ENST00000517138 166 ntBASIC4.06□□□□□ -1.76
VPS33AQ96AX1 RNU6-1261P-201ENST00000517194 104 ntBASIC4.06□□□□□ -1.76
VPS33AQ96AX1 IGKV1-32-201ENST00000519290 311 ntBASIC4.06□□□□□ -1.76
VPS33AQ96AX1 AC090502.2-201ENST00000549267 280 ntBASIC4.06□□□□□ -1.76
VPS33AQ96AX1 AC008127.2-201ENST00000549925 1075 ntBASIC4.06□□□□□ -1.76
VPS33AQ96AX1 MIR4644-201ENST00000579929 84 ntBASIC4.06□□□□□ -1.76
VPS33AQ96AX1 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC4.06□□□□□ -1.76
VPS33AQ96AX1 VN1R83P-201ENST00000595685 445 ntBASIC4.06□□□□□ -1.76
VPS33AQ96AX1 AC008782.1-201ENST00000603386 430 ntBASIC4.06□□□□□ -1.76
VPS33AQ96AX1 AL035411.2-201ENST00000604022 421 ntBASIC4.06□□□□□ -1.76
VPS33AQ96AX1 AL365400.2-201ENST00000605604 902 ntBASIC4.06□□□□□ -1.76
VPS33AQ96AX1 AL159169.3-201ENST00000608871 561 ntBASIC4.06□□□□□ -1.76
VPS33AQ96AX1 AC116651.1-201ENST00000609724 556 ntBASIC4.06□□□□□ -1.76
VPS33AQ96AX1 AC023158.2-201ENST00000614876 543 ntBASIC4.06□□□□□ -1.76
VPS33AQ96AX1 AC231759.1-201ENST00000616455 597 ntBASIC4.06□□□□□ -1.76
VPS33AQ96AX1 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC4.06□□□□□ -1.76
VPS33AQ96AX1 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC4.06□□□□□ -1.76
VPS33AQ96AX1 AC008013.2-202ENST00000637965 364 ntBASIC4.06□□□□□ -1.76
VPS33AQ96AX1 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
VPS33AQ96AX1 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
VPS33AQ96AX1 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
VPS33AQ96AX1 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.05□□□□□ -1.76
VPS33AQ96AX1 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC4.05□□□□□ -1.76
VPS33AQ96AX1 FAM35DP-201ENST00000323387 2712 ntBASIC4.05□□□□□ -1.76
VPS33AQ96AX1 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
VPS33AQ96AX1 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
VPS33AQ96AX1 ACTR3BP2-202ENST00000623630 1338 ntBASIC4.05□□□□□ -1.76
VPS33AQ96AX1 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
VPS33AQ96AX1 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 123.5 ms