Protein–RNA interactions for Protein: Q8WUD4

CCDC12, Coiled-coil domain-containing protein 12, humanhuman

Predicted RBP Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12Q8WUD4 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
CCDC12Q8WUD4 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
CCDC12Q8WUD4 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CCDC12Q8WUD4 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
CCDC12Q8WUD4 AC058791.1-201ENST00000608412 3198 ntBASIC3.88□□□□□ -1.79
CCDC12Q8WUD4 SNORA11-201ENST00000408789 128 ntBASIC3.88□□□□□ -1.79
CCDC12Q8WUD4 RPL31P45-201ENST00000419532 356 ntBASIC3.88□□□□□ -1.79
CCDC12Q8WUD4 RPS15AP6-201ENST00000420703 385 ntBASIC3.88□□□□□ -1.79
CCDC12Q8WUD4 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.88□□□□□ -1.79
CCDC12Q8WUD4 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.88□□□□□ -1.79
CCDC12Q8WUD4 RPL21P110-201ENST00000433345 446 ntBASIC3.88□□□□□ -1.79
CCDC12Q8WUD4 AC245517.2-201ENST00000442890 346 ntBASIC3.88□□□□□ -1.79
CCDC12Q8WUD4 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CCDC12Q8WUD4 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.88□□□□□ -1.79
CCDC12Q8WUD4 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC3.88□□□□□ -1.79
CCDC12Q8WUD4 AP001086.1-201ENST00000494882 321 ntBASIC3.88□□□□□ -1.79
CCDC12Q8WUD4 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC3.88□□□□□ -1.79
CCDC12Q8WUD4 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC3.88□□□□□ -1.79
CCDC12Q8WUD4 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC3.88□□□□□ -1.79
CCDC12Q8WUD4 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC3.88□□□□□ -1.79
CCDC12Q8WUD4 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.88□□□□□ -1.79
CCDC12Q8WUD4 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC3.88□□□□□ -1.79
CCDC12Q8WUD4 AP001636.2-201ENST00000525517 696 ntBASIC3.88□□□□□ -1.79
CCDC12Q8WUD4 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC3.88□□□□□ -1.79
CCDC12Q8WUD4 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.88□□□□□ -1.79
CCDC12Q8WUD4 CCNG2P1-201ENST00000549521 1000 ntBASIC3.88□□□□□ -1.79
CCDC12Q8WUD4 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC3.88□□□□□ -1.79
CCDC12Q8WUD4 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC3.88□□□□□ -1.79
CCDC12Q8WUD4 RN7SL339P-201ENST00000580597 296 ntBASIC3.88□□□□□ -1.79
CCDC12Q8WUD4 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC3.88□□□□□ -1.79
CCDC12Q8WUD4 AL356321.1-201ENST00000621360 228 ntBASIC3.88□□□□□ -1.79
CCDC12Q8WUD4 AC127502.3-201ENST00000636170 1206 ntBASIC3.88□□□□□ -1.79
CCDC12Q8WUD4 U6.105-201ENST00000637379 88 ntBASIC3.88□□□□□ -1.79
CCDC12Q8WUD4 HSPA8P19-201ENST00000505359 1517 ntBASIC3.88□□□□□ -1.79
CCDC12Q8WUD4 CR383658.2-201ENST00000547576 1525 ntBASIC3.88□□□□□ -1.79
CCDC12Q8WUD4 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
CCDC12Q8WUD4 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC3.88□□□□□ -1.79
CCDC12Q8WUD4 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
CCDC12Q8WUD4 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CCDC12Q8WUD4 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.88□□□□□ -1.79
CCDC12Q8WUD4 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
CCDC12Q8WUD4 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
CCDC12Q8WUD4 SNORA71.3-201ENST00000362582 128 ntBASIC3.87□□□□□ -1.79
CCDC12Q8WUD4 RNA5SP197-201ENST00000363357 119 ntBASIC3.87□□□□□ -1.79
CCDC12Q8WUD4 MIR490-201ENST00000384865 128 ntBASIC3.87□□□□□ -1.79
CCDC12Q8WUD4 RNA5SP498-201ENST00000411342 120 ntBASIC3.87□□□□□ -1.79
CCDC12Q8WUD4 RANP4-201ENST00000413361 655 ntBASIC3.87□□□□□ -1.79
CCDC12Q8WUD4 AC009237.5-201ENST00000414271 501 ntBASIC3.87□□□□□ -1.79
CCDC12Q8WUD4 HSFY4P-201ENST00000415994 1181 ntBASIC3.87□□□□□ -1.79
CCDC12Q8WUD4 OR1AA1P-201ENST00000419597 916 ntBASIC3.87□□□□□ -1.79
CCDC12Q8WUD4 AC012065.2-201ENST00000421295 375 ntBASIC3.87□□□□□ -1.79
CCDC12Q8WUD4 ELOCP6-201ENST00000429066 328 ntBASIC3.87□□□□□ -1.79
CCDC12Q8WUD4 YME1L1P1-201ENST00000429435 297 ntBASIC3.87□□□□□ -1.79
CCDC12Q8WUD4 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC3.87□□□□□ -1.79
CCDC12Q8WUD4 CYCSP43-201ENST00000438233 310 ntBASIC3.87□□□□□ -1.79
CCDC12Q8WUD4 AL353898.1-201ENST00000444055 238 ntBASIC3.87□□□□□ -1.79
CCDC12Q8WUD4 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC3.87□□□□□ -1.79
CCDC12Q8WUD4 HMGB3P30-201ENST00000457863 606 ntBASIC3.87□□□□□ -1.79
CCDC12Q8WUD4 ELOCP12-201ENST00000458706 328 ntBASIC3.87□□□□□ -1.79
CCDC12Q8WUD4 RPL21P10-201ENST00000463521 490 ntBASIC3.87□□□□□ -1.79
CCDC12Q8WUD4 AC073522.1-201ENST00000483312 377 ntBASIC3.87□□□□□ -1.79
CCDC12Q8WUD4 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC3.87□□□□□ -1.79
CCDC12Q8WUD4 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
CCDC12Q8WUD4 CCNHP1-201ENST00000513311 678 ntBASIC3.87□□□□□ -1.79
CCDC12Q8WUD4 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC3.87□□□□□ -1.79
CCDC12Q8WUD4 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC3.87□□□□□ -1.79
CCDC12Q8WUD4 NCAPGP2-201ENST00000557911 754 ntBASIC3.87□□□□□ -1.79
CCDC12Q8WUD4 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC3.87□□□□□ -1.79
CCDC12Q8WUD4 AC015917.1-201ENST00000579654 510 ntBASIC3.87□□□□□ -1.79
CCDC12Q8WUD4 MIR4276-201ENST00000584832 70 ntBASIC3.87□□□□□ -1.79
CCDC12Q8WUD4 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC3.87□□□□□ -1.79
CCDC12Q8WUD4 AC084757.4-201ENST00000616350 526 ntBASIC3.87□□□□□ -1.79
CCDC12Q8WUD4 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.87□□□□□ -1.79
CCDC12Q8WUD4 AC012314.7-201ENST00000619693 93 ntBASIC3.87□□□□□ -1.79
CCDC12Q8WUD4 SNORD39.4-201ENST00000620099 78 ntBASIC3.87□□□□□ -1.79
CCDC12Q8WUD4 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
CCDC12Q8WUD4 Z83843.1-201ENST00000604070 3685 ntBASIC3.87□□□□□ -1.79
CCDC12Q8WUD4 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC3.87□□□□□ -1.79
CCDC12Q8WUD4 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.87□□□□□ -1.79
CCDC12Q8WUD4 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
CCDC12Q8WUD4 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
CCDC12Q8WUD4 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.86□□□□□ -1.79
CCDC12Q8WUD4 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CCDC12Q8WUD4 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.86□□□□□ -1.79
CCDC12Q8WUD4 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
CCDC12Q8WUD4 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
CCDC12Q8WUD4 RNA5SP72-201ENST00000364442 117 ntBASIC3.86□□□□□ -1.79
CCDC12Q8WUD4 RNA5SP167-201ENST00000365461 116 ntBASIC3.86□□□□□ -1.79
CCDC12Q8WUD4 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
CCDC12Q8WUD4 AL356968.1-201ENST00000416622 474 ntBASIC3.86□□□□□ -1.79
CCDC12Q8WUD4 PRDX3P3-201ENST00000447765 522 ntBASIC3.86□□□□□ -1.79
CCDC12Q8WUD4 AL358232.1-201ENST00000448030 501 ntBASIC3.86□□□□□ -1.79
CCDC12Q8WUD4 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC3.86□□□□□ -1.79
CCDC12Q8WUD4 RN7SL442P-201ENST00000473804 320 ntBASIC3.86□□□□□ -1.79
CCDC12Q8WUD4 RPL21P103-201ENST00000479921 488 ntBASIC3.86□□□□□ -1.79
CCDC12Q8WUD4 AC021205.2-201ENST00000480069 347 ntBASIC3.86□□□□□ -1.79
CCDC12Q8WUD4 WBP1LP4-201ENST00000505043 344 ntBASIC3.86□□□□□ -1.79
CCDC12Q8WUD4 USP9YP5-201ENST00000511770 630 ntBASIC3.86□□□□□ -1.79
CCDC12Q8WUD4 RN7SKP116-201ENST00000516902 319 ntBASIC3.86□□□□□ -1.79
CCDC12Q8WUD4 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 85.5 ms