Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 LSM1P1-201ENST00000438629 273 ntBASIC1.84□□□□□ -2.11
SPTSSBQ8NFR3 MED6P1-201ENST00000439659 713 ntBASIC1.84□□□□□ -2.11
SPTSSBQ8NFR3 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
SPTSSBQ8NFR3 NOTCH2P1-201ENST00000443481 624 ntBASIC1.84□□□□□ -2.11
SPTSSBQ8NFR3 Z77249.1-201ENST00000444622 1175 ntBASIC1.84□□□□□ -2.11
SPTSSBQ8NFR3 RPL31P20-201ENST00000449593 360 ntBASIC1.84□□□□□ -2.11
SPTSSBQ8NFR3 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC1.84□□□□□ -2.11
SPTSSBQ8NFR3 AC023141.9-201ENST00000458734 412 ntBASIC1.84□□□□□ -2.11
SPTSSBQ8NFR3 OR9M1P-201ENST00000459641 921 ntBASIC1.84□□□□□ -2.11
SPTSSBQ8NFR3 RPS23P7-201ENST00000466210 444 ntBASIC1.84□□□□□ -2.11
SPTSSBQ8NFR3 AC017015.1-201ENST00000477387 286 ntBASIC1.84□□□□□ -2.11
SPTSSBQ8NFR3 GAPDHP39-201ENST00000481866 979 ntBASIC1.84□□□□□ -2.11
SPTSSBQ8NFR3 AC009901.1-201ENST00000506703 541 ntBASIC1.84□□□□□ -2.11
SPTSSBQ8NFR3 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
SPTSSBQ8NFR3 AC010625.1-201ENST00000511296 403 ntBASIC1.84□□□□□ -2.11
SPTSSBQ8NFR3 AC093840.1-201ENST00000511599 336 ntBASIC1.84□□□□□ -2.11
SPTSSBQ8NFR3 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC1.84□□□□□ -2.11
SPTSSBQ8NFR3 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC1.84□□□□□ -2.11
SPTSSBQ8NFR3 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC1.84□□□□□ -2.11
SPTSSBQ8NFR3 IGKV2-18-201ENST00000522607 343 ntBASIC1.84□□□□□ -2.11
SPTSSBQ8NFR3 AC087373.1-201ENST00000524920 491 ntBASIC1.84□□□□□ -2.11
SPTSSBQ8NFR3 OR8G5-201ENST00000524943 1041 ntBASIC1.84□□□□□ -2.11
SPTSSBQ8NFR3 OR4R3P-201ENST00000525084 838 ntBASIC1.84□□□□□ -2.11
SPTSSBQ8NFR3 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC1.84□□□□□ -2.11
SPTSSBQ8NFR3 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC1.84□□□□□ -2.11
SPTSSBQ8NFR3 DUXAP6-201ENST00000553858 601 ntBASIC1.84□□□□□ -2.11
SPTSSBQ8NFR3 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC1.84□□□□□ -2.11
SPTSSBQ8NFR3 AC012182.1-201ENST00000570133 895 ntBASIC1.84□□□□□ -2.11
SPTSSBQ8NFR3 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC1.84□□□□□ -2.11
SPTSSBQ8NFR3 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC1.84□□□□□ -2.11
SPTSSBQ8NFR3 AP001029.3-201ENST00000588063 596 ntBASIC1.84□□□□□ -2.11
SPTSSBQ8NFR3 AC245036.5-201ENST00000596330 847 ntBASIC1.84□□□□□ -2.11
SPTSSBQ8NFR3 AC008782.1-201ENST00000603386 430 ntBASIC1.84□□□□□ -2.11
SPTSSBQ8NFR3 HSPE1P14-201ENST00000605812 302 ntBASIC1.84□□□□□ -2.11
SPTSSBQ8NFR3 AC024560.3-201ENST00000608482 349 ntBASIC1.84□□□□□ -2.11
SPTSSBQ8NFR3 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC1.84□□□□□ -2.11
SPTSSBQ8NFR3 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC1.84□□□□□ -2.11
SPTSSBQ8NFR3 AL133370.2-201ENST00000619934 439 ntBASIC1.84□□□□□ -2.11
SPTSSBQ8NFR3 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
SPTSSBQ8NFR3 AC022149.2-201ENST00000621061 203 ntBASIC1.84□□□□□ -2.11
SPTSSBQ8NFR3 AC006111.3-201ENST00000622137 383 ntBASIC1.84□□□□□ -2.11
SPTSSBQ8NFR3 AC010297.1-201ENST00000623948 149 ntBASIC1.84□□□□□ -2.11
SPTSSBQ8NFR3 AC006963.1-201ENST00000624003 1052 ntBASIC1.84□□□□□ -2.11
SPTSSBQ8NFR3 SNORA17.5-201ENST00000630429 132 ntBASIC1.84□□□□□ -2.11
SPTSSBQ8NFR3 AP000553.6-201ENST00000641242 118 ntBASIC1.84□□□□□ -2.11
SPTSSBQ8NFR3 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
SPTSSBQ8NFR3 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.12
SPTSSBQ8NFR3 MFSD8-233ENST00000641482 4860 ntBASIC1.84□□□□□ -2.12
SPTSSBQ8NFR3 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC1.84□□□□□ -2.12
SPTSSBQ8NFR3 DYNC2LI1-210ENST00000605786 1346 ntAPPRIS ALT1 TSL 1 (best) BASIC1.84□□□□□ -2.12
SPTSSBQ8NFR3 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC1.84□□□□□ -2.12
SPTSSBQ8NFR3 PABPC1P6-201ENST00000445594 1829 ntBASIC1.84□□□□□ -2.12
SPTSSBQ8NFR3 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC1.84□□□□□ -2.12
SPTSSBQ8NFR3 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.12
SPTSSBQ8NFR3 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC1.84□□□□□ -2.12
SPTSSBQ8NFR3 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
SPTSSBQ8NFR3 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC1.83□□□□□ -2.12
SPTSSBQ8NFR3 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC1.83□□□□□ -2.12
SPTSSBQ8NFR3 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
SPTSSBQ8NFR3 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
SPTSSBQ8NFR3 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
SPTSSBQ8NFR3 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
SPTSSBQ8NFR3 RNA5SP123-201ENST00000363244 119 ntBASIC1.83□□□□□ -2.12
SPTSSBQ8NFR3 RNA5SP393-201ENST00000363423 117 ntBASIC1.83□□□□□ -2.12
SPTSSBQ8NFR3 RN7SKP187-201ENST00000365536 330 ntBASIC1.83□□□□□ -2.12
SPTSSBQ8NFR3 AL031985.1-201ENST00000392713 418 ntBASIC1.83□□□□□ -2.12
SPTSSBQ8NFR3 SNORD88.1-201ENST00000408684 91 ntBASIC1.83□□□□□ -2.12
SPTSSBQ8NFR3 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC1.83□□□□□ -2.12
SPTSSBQ8NFR3 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC1.83□□□□□ -2.12
SPTSSBQ8NFR3 Z97055.1-201ENST00000419730 712 ntBASIC1.83□□□□□ -2.12
SPTSSBQ8NFR3 UBE2D3P2-201ENST00000424409 445 ntBASIC1.83□□□□□ -2.12
SPTSSBQ8NFR3 OR51AB1P-201ENST00000429046 620 ntBASIC1.83□□□□□ -2.12
SPTSSBQ8NFR3 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC1.83□□□□□ -2.12
SPTSSBQ8NFR3 RPL12P11-201ENST00000439970 501 ntBASIC1.83□□□□□ -2.12
SPTSSBQ8NFR3 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC1.83□□□□□ -2.12
SPTSSBQ8NFR3 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC1.83□□□□□ -2.12
SPTSSBQ8NFR3 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC1.83□□□□□ -2.12
SPTSSBQ8NFR3 Z99127.3-201ENST00000448158 395 ntBASIC1.83□□□□□ -2.12
SPTSSBQ8NFR3 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC1.83□□□□□ -2.12
SPTSSBQ8NFR3 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
SPTSSBQ8NFR3 snoU13.1-201ENST00000459157 104 ntBASIC1.83□□□□□ -2.12
SPTSSBQ8NFR3 RPL5P13-201ENST00000462840 709 ntBASIC1.83□□□□□ -2.12
SPTSSBQ8NFR3 AP001025.2-201ENST00000490908 477 ntBASIC1.83□□□□□ -2.12
SPTSSBQ8NFR3 AC110792.1-201ENST00000491826 472 ntBASIC1.83□□□□□ -2.12
SPTSSBQ8NFR3 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC1.83□□□□□ -2.12
SPTSSBQ8NFR3 KRTAP5-14P-201ENST00000502328 121 ntBASIC1.83□□□□□ -2.12
SPTSSBQ8NFR3 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC1.83□□□□□ -2.12
SPTSSBQ8NFR3 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC1.83□□□□□ -2.12
SPTSSBQ8NFR3 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC1.83□□□□□ -2.12
SPTSSBQ8NFR3 CDC42P4-201ENST00000510507 563 ntBASIC1.83□□□□□ -2.12
SPTSSBQ8NFR3 RNA5SP179-201ENST00000517284 121 ntBASIC1.83□□□□□ -2.12
SPTSSBQ8NFR3 IGLVIV-66-1-201ENST00000521832 460 ntBASIC1.83□□□□□ -2.12
SPTSSBQ8NFR3 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
SPTSSBQ8NFR3 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC1.83□□□□□ -2.12
SPTSSBQ8NFR3 OR4R1P-201ENST00000529879 463 ntBASIC1.83□□□□□ -2.12
SPTSSBQ8NFR3 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC1.83□□□□□ -2.12
SPTSSBQ8NFR3 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC1.83□□□□□ -2.12
SPTSSBQ8NFR3 AC074029.1-201ENST00000552531 1044 ntBASIC1.83□□□□□ -2.12
SPTSSBQ8NFR3 AC084783.1-201ENST00000565846 910 ntBASIC1.83□□□□□ -2.12
SPTSSBQ8NFR3 UBE2FP2-201ENST00000566646 462 ntBASIC1.83□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms