Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 AC068831.4-201ENST00000556118 109 ntBASIC4.05□□□□□ -1.76
NUP54Q7Z3B4 AC107954.1-201ENST00000565906 727 ntBASIC4.05□□□□□ -1.76
NUP54Q7Z3B4 AC012182.1-201ENST00000570133 895 ntBASIC4.05□□□□□ -1.76
NUP54Q7Z3B4 MIR4277-201ENST00000578298 84 ntBASIC4.05□□□□□ -1.76
NUP54Q7Z3B4 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC4.05□□□□□ -1.76
NUP54Q7Z3B4 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.05□□□□□ -1.76
NUP54Q7Z3B4 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC4.05□□□□□ -1.76
NUP54Q7Z3B4 AP003973.1-201ENST00000604639 691 ntBASIC4.05□□□□□ -1.76
NUP54Q7Z3B4 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.05□□□□□ -1.76
NUP54Q7Z3B4 AC068722.2-201ENST00000618734 544 ntBASIC4.05□□□□□ -1.76
NUP54Q7Z3B4 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC4.05□□□□□ -1.76
NUP54Q7Z3B4 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC4.05□□□□□ -1.76
NUP54Q7Z3B4 AC007546.2-201ENST00000623996 360 ntBASIC4.05□□□□□ -1.76
NUP54Q7Z3B4 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.05□□□□□ -1.76
NUP54Q7Z3B4 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
NUP54Q7Z3B4 IQCB2P-201ENST00000401788 1633 ntBASIC4.05□□□□□ -1.76
NUP54Q7Z3B4 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
NUP54Q7Z3B4 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
NUP54Q7Z3B4 ANKRD20A10P-201ENST00000457591 1515 ntBASIC4.05□□□□□ -1.76
NUP54Q7Z3B4 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
NUP54Q7Z3B4 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
NUP54Q7Z3B4 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
NUP54Q7Z3B4 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.04□□□□□ -1.76
NUP54Q7Z3B4 MTND5P31-201ENST00000419366 1374 ntBASIC4.04□□□□□ -1.76
NUP54Q7Z3B4 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
NUP54Q7Z3B4 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
NUP54Q7Z3B4 SUCLA2P2-201ENST00000417269 1309 ntBASIC4.04□□□□□ -1.76
NUP54Q7Z3B4 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.04□□□□□ -1.76
NUP54Q7Z3B4 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
NUP54Q7Z3B4 AC008033.1-201ENST00000216407 1162 ntBASIC4.04□□□□□ -1.76
NUP54Q7Z3B4 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
NUP54Q7Z3B4 RNU6-1226P-201ENST00000384317 107 ntBASIC4.04□□□□□ -1.76
NUP54Q7Z3B4 MIR217-201ENST00000384817 110 ntBASIC4.04□□□□□ -1.76
NUP54Q7Z3B4 MT-TC-201ENST00000387405 66 ntBASIC4.04□□□□□ -1.76
NUP54Q7Z3B4 U3.22-201ENST00000391120 215 ntBASIC4.04□□□□□ -1.76
NUP54Q7Z3B4 ANAPC10P1-201ENST00000395991 556 ntBASIC4.04□□□□□ -1.76
NUP54Q7Z3B4 AL139098.1-201ENST00000407291 389 ntBASIC4.04□□□□□ -1.76
NUP54Q7Z3B4 RNU4-22P-201ENST00000411058 166 ntBASIC4.04□□□□□ -1.76
NUP54Q7Z3B4 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC4.04□□□□□ -1.76
NUP54Q7Z3B4 P2RY10P2-201ENST00000416730 913 ntBASIC4.04□□□□□ -1.76
NUP54Q7Z3B4 RPS3AP37-201ENST00000419176 745 ntBASIC4.04□□□□□ -1.76
NUP54Q7Z3B4 EIF4EP1-201ENST00000422311 642 ntBASIC4.04□□□□□ -1.76
NUP54Q7Z3B4 SCP2-206ENST00000430330 938 ntTSL 2 BASIC4.04□□□□□ -1.76
NUP54Q7Z3B4 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.04□□□□□ -1.76
NUP54Q7Z3B4 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC4.04□□□□□ -1.76
NUP54Q7Z3B4 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC4.04□□□□□ -1.76
NUP54Q7Z3B4 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC4.04□□□□□ -1.76
NUP54Q7Z3B4 ELOCP13-201ENST00000443934 329 ntBASIC4.04□□□□□ -1.76
NUP54Q7Z3B4 HMGB1P16-201ENST00000447155 540 ntBASIC4.04□□□□□ -1.76
NUP54Q7Z3B4 AC092155.2-201ENST00000454675 477 ntBASIC4.04□□□□□ -1.76
NUP54Q7Z3B4 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC4.04□□□□□ -1.76
NUP54Q7Z3B4 VPS26AP1-201ENST00000483197 979 ntBASIC4.04□□□□□ -1.76
NUP54Q7Z3B4 RPS6P4-201ENST00000494693 758 ntBASIC4.04□□□□□ -1.76
NUP54Q7Z3B4 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC4.04□□□□□ -1.76
NUP54Q7Z3B4 DYNLL1P6-201ENST00000503440 264 ntBASIC4.04□□□□□ -1.76
NUP54Q7Z3B4 AC011352.3-201ENST00000505162 593 ntBASIC4.04□□□□□ -1.76
NUP54Q7Z3B4 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC4.04□□□□□ -1.76
NUP54Q7Z3B4 AC113347.3-201ENST00000509113 148 ntBASIC4.04□□□□□ -1.76
NUP54Q7Z3B4 SNORA70.14-201ENST00000516205 110 ntBASIC4.04□□□□□ -1.76
NUP54Q7Z3B4 AC008802.1-201ENST00000519121 791 ntBASIC4.04□□□□□ -1.76
NUP54Q7Z3B4 AC034205.1-201ENST00000520621 638 ntBASIC4.04□□□□□ -1.76
NUP54Q7Z3B4 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC4.04□□□□□ -1.76
NUP54Q7Z3B4 MTCYBP41-201ENST00000528913 1123 ntBASIC4.04□□□□□ -1.76
NUP54Q7Z3B4 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC4.04□□□□□ -1.76
NUP54Q7Z3B4 AP001317.1-201ENST00000531194 960 ntBASIC4.04□□□□□ -1.76
NUP54Q7Z3B4 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC4.04□□□□□ -1.76
NUP54Q7Z3B4 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC4.04□□□□□ -1.76
NUP54Q7Z3B4 AGGF1P8-201ENST00000562979 1000 ntBASIC4.04□□□□□ -1.76
NUP54Q7Z3B4 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC4.04□□□□□ -1.76
NUP54Q7Z3B4 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC4.04□□□□□ -1.76
NUP54Q7Z3B4 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.04□□□□□ -1.76
NUP54Q7Z3B4 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC4.04□□□□□ -1.76
NUP54Q7Z3B4 AC113368.1-201ENST00000603736 382 ntBASIC4.04□□□□□ -1.76
NUP54Q7Z3B4 AC113403.1-201ENST00000604910 193 ntBASIC4.04□□□□□ -1.76
NUP54Q7Z3B4 AL513477.2-201ENST00000607858 568 ntBASIC4.04□□□□□ -1.76
NUP54Q7Z3B4 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
NUP54Q7Z3B4 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC4.04□□□□□ -1.76
NUP54Q7Z3B4 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.04□□□□□ -1.76
NUP54Q7Z3B4 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC4.04□□□□□ -1.76
NUP54Q7Z3B4 AC055839.1-201ENST00000634467 498 ntBASIC4.04□□□□□ -1.76
NUP54Q7Z3B4 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.04□□□□□ -1.76
NUP54Q7Z3B4 LINC02211-204ENST00000642024 1070 ntBASIC4.04□□□□□ -1.76
NUP54Q7Z3B4 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
NUP54Q7Z3B4 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
NUP54Q7Z3B4 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
NUP54Q7Z3B4 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
NUP54Q7Z3B4 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
NUP54Q7Z3B4 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.04□□□□□ -1.76
NUP54Q7Z3B4 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC4.03□□□□□ -1.76
NUP54Q7Z3B4 MAPK6PS3-201ENST00000403865 2162 ntBASIC4.03□□□□□ -1.76
NUP54Q7Z3B4 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.03□□□□□ -1.76
NUP54Q7Z3B4 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.76
NUP54Q7Z3B4 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
NUP54Q7Z3B4 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC4.03□□□□□ -1.76
NUP54Q7Z3B4 AL359893.1-201ENST00000447628 1580 ntBASIC4.03□□□□□ -1.76
NUP54Q7Z3B4 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
NUP54Q7Z3B4 MIR331-201ENST00000362302 94 ntBASIC4.03□□□□□ -1.76
NUP54Q7Z3B4 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC4.03□□□□□ -1.76
NUP54Q7Z3B4 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
NUP54Q7Z3B4 RNU6-1181P-201ENST00000384191 106 ntBASIC4.03□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms