Protein–RNA interactions for Protein: Q15853

USF2, Upstream stimulatory factor 2, humanhuman

Predicted RBP Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USF2Q15853 TRIM60P9Y-201ENST00000438459 816 ntBASIC3.14□□□□□ -1.91
USF2Q15853 TRIM60P11Y-201ENST00000445313 801 ntBASIC3.14□□□□□ -1.91
USF2Q15853 AC092685.1-201ENST00000447960 1243 ntBASIC3.14□□□□□ -1.91
USF2Q15853 AL500522.2-201ENST00000448562 343 ntBASIC3.14□□□□□ -1.91
USF2Q15853 NANOGP10-201ENST00000453325 895 ntBASIC3.14□□□□□ -1.91
USF2Q15853 AC006539.3-201ENST00000454258 129 ntBASIC3.14□□□□□ -1.91
USF2Q15853 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC3.14□□□□□ -1.91
USF2Q15853 snoU13.3-201ENST00000459441 104 ntBASIC3.14□□□□□ -1.91
USF2Q15853 HMGB1P25-201ENST00000468402 607 ntBASIC3.14□□□□□ -1.91
USF2Q15853 RN7SL303P-201ENST00000469773 251 ntBASIC3.14□□□□□ -1.91
USF2Q15853 RPS23P3-201ENST00000470993 430 ntBASIC3.14□□□□□ -1.91
USF2Q15853 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC3.14□□□□□ -1.91
USF2Q15853 AC108475.1-201ENST00000507880 950 ntBASIC3.14□□□□□ -1.91
USF2Q15853 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC3.14□□□□□ -1.91
USF2Q15853 AC108157.1-201ENST00000510511 539 ntBASIC3.14□□□□□ -1.91
USF2Q15853 MTND1P6-201ENST00000523621 946 ntBASIC3.14□□□□□ -1.91
USF2Q15853 AC239860.2-201ENST00000525886 270 ntBASIC3.14□□□□□ -1.91
USF2Q15853 OR5AK3P-201ENST00000527486 1297 ntBASIC3.14□□□□□ -1.91
USF2Q15853 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.14□□□□□ -1.91
USF2Q15853 AC037471.2-201ENST00000564941 598 ntBASIC3.14□□□□□ -1.91
USF2Q15853 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC3.14□□□□□ -1.91
USF2Q15853 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.14□□□□□ -1.91
USF2Q15853 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC3.14□□□□□ -1.91
USF2Q15853 MIR5684-201ENST00000585074 65 ntBASIC3.14□□□□□ -1.91
USF2Q15853 AL606490.9-201ENST00000603331 271 ntBASIC3.14□□□□□ -1.91
USF2Q15853 AC091488.1-201ENST00000604239 660 ntBASIC3.14□□□□□ -1.91
USF2Q15853 AC011374.2-201ENST00000607135 526 ntBASIC3.14□□□□□ -1.91
USF2Q15853 AC006338.2-201ENST00000616864 791 ntBASIC3.14□□□□□ -1.91
USF2Q15853 AL121890.3-201ENST00000618494 516 ntBASIC3.14□□□□□ -1.91
USF2Q15853 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
USF2Q15853 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
USF2Q15853 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
USF2Q15853 CEP170P1-201ENST00000502249 4587 ntBASIC3.14□□□□□ -1.91
USF2Q15853 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
USF2Q15853 SRP72P2-201ENST00000344851 1979 ntBASIC3.14□□□□□ -1.91
USF2Q15853 AC104446.1-201ENST00000613728 1321 ntBASIC3.14□□□□□ -1.91
USF2Q15853 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
USF2Q15853 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC3.14□□□□□ -1.91
USF2Q15853 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
USF2Q15853 AC093908.1-201ENST00000623125 8092 ntBASIC3.13□□□□□ -1.91
USF2Q15853 LARP1BP1-201ENST00000506036 1359 ntBASIC3.13□□□□□ -1.91
USF2Q15853 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC3.13□□□□□ -1.91
USF2Q15853 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
USF2Q15853 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.13□□□□□ -1.91
USF2Q15853 RNA5SP366-201ENST00000365454 123 ntBASIC3.13□□□□□ -1.91
USF2Q15853 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.13□□□□□ -1.91
USF2Q15853 U3.22-201ENST00000391120 215 ntBASIC3.13□□□□□ -1.91
USF2Q15853 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.13□□□□□ -1.91
USF2Q15853 GLRXP1-201ENST00000423261 334 ntBASIC3.13□□□□□ -1.91
USF2Q15853 AL358472.1-201ENST00000431295 329 ntBASIC3.13□□□□□ -1.91
USF2Q15853 MTCO1P57-201ENST00000432182 261 ntBASIC3.13□□□□□ -1.91
USF2Q15853 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC3.13□□□□□ -1.91
USF2Q15853 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.13□□□□□ -1.91
USF2Q15853 RPL36AP33-201ENST00000450395 310 ntBASIC3.13□□□□□ -1.91
USF2Q15853 snoU13.4-201ENST00000458916 104 ntBASIC3.13□□□□□ -1.91
USF2Q15853 AC091179.1-201ENST00000461606 579 ntBASIC3.13□□□□□ -1.91
USF2Q15853 RPS23P7-201ENST00000466210 444 ntBASIC3.13□□□□□ -1.91
USF2Q15853 RPL7P9-201ENST00000468715 747 ntBASIC3.13□□□□□ -1.91
USF2Q15853 RN7SL385P-201ENST00000468873 276 ntBASIC3.13□□□□□ -1.91
USF2Q15853 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC3.13□□□□□ -1.91
USF2Q15853 RPL7P5-201ENST00000471472 736 ntBASIC3.13□□□□□ -1.91
USF2Q15853 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC3.13□□□□□ -1.91
USF2Q15853 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC3.13□□□□□ -1.91
USF2Q15853 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC3.13□□□□□ -1.91
USF2Q15853 AC004069.2-201ENST00000505438 1114 ntBASIC3.13□□□□□ -1.91
USF2Q15853 AC133963.2-201ENST00000513686 578 ntBASIC3.13□□□□□ -1.91
USF2Q15853 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC3.13□□□□□ -1.91
USF2Q15853 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC3.13□□□□□ -1.91
USF2Q15853 SNORD59.2-201ENST00000516873 68 ntBASIC3.13□□□□□ -1.91
USF2Q15853 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC3.13□□□□□ -1.91
USF2Q15853 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.13□□□□□ -1.91
USF2Q15853 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC3.13□□□□□ -1.91
USF2Q15853 CR383656.14-201ENST00000551951 406 ntBASIC3.13□□□□□ -1.91
USF2Q15853 TRAV37-201ENST00000553906 342 ntBASIC3.13□□□□□ -1.91
USF2Q15853 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC3.13□□□□□ -1.91
USF2Q15853 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
USF2Q15853 OR4H12P-201ENST00000556269 907 ntBASIC3.13□□□□□ -1.91
USF2Q15853 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC3.13□□□□□ -1.91
USF2Q15853 MIR4425-201ENST00000580572 84 ntBASIC3.13□□□□□ -1.91
USF2Q15853 MIR4697-201ENST00000582977 78 ntBASIC3.13□□□□□ -1.91
USF2Q15853 SNORD84-203ENST00000584275 78 ntBASIC3.13□□□□□ -1.91
USF2Q15853 AC008962.1-201ENST00000605729 304 ntBASIC3.13□□□□□ -1.91
USF2Q15853 AL591424.2-201ENST00000617023 128 ntBASIC3.13□□□□□ -1.91
USF2Q15853 MIR7151-201ENST00000617477 60 ntBASIC3.13□□□□□ -1.91
USF2Q15853 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.13□□□□□ -1.91
USF2Q15853 AC090897.3-201ENST00000636973 1157 ntBASIC3.13□□□□□ -1.91
USF2Q15853 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC3.13□□□□□ -1.91
USF2Q15853 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC3.13□□□□□ -1.91
USF2Q15853 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
USF2Q15853 AL645568.2-201ENST00000432815 1337 ntBASIC3.13□□□□□ -1.91
USF2Q15853 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC3.13□□□□□ -1.91
USF2Q15853 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
USF2Q15853 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
USF2Q15853 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.13□□□□□ -1.91
USF2Q15853 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC3.13□□□□□ -1.91
USF2Q15853 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
USF2Q15853 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.12□□□□□ -1.91
USF2Q15853 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
USF2Q15853 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
USF2Q15853 MIR383-201ENST00000362257 73 ntBASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 117.2 ms