Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 MTCO1P29-201ENST00000496868 288 ntBASIC5.73□□□□□ -1.49
PCDH1Q08174 SRP72-202ENST00000504757 745 ntTSL 2 BASIC5.73□□□□□ -1.49
PCDH1Q08174 AC005741.1-201ENST00000511094 432 ntBASIC5.73□□□□□ -1.49
PCDH1Q08174 Y_RNA.665-201ENST00000516177 98 ntBASIC5.73□□□□□ -1.49
PCDH1Q08174 Y_RNA.718-201ENST00000517110 102 ntBASIC5.73□□□□□ -1.49
PCDH1Q08174 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC5.73□□□□□ -1.49
PCDH1Q08174 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC5.73□□□□□ -1.49
PCDH1Q08174 AC084121.1-201ENST00000533882 835 ntBASIC5.73□□□□□ -1.49
PCDH1Q08174 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC5.73□□□□□ -1.49
PCDH1Q08174 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC5.73□□□□□ -1.49
PCDH1Q08174 AC026826.3-201ENST00000561747 158 ntBASIC5.73□□□□□ -1.49
PCDH1Q08174 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC5.73□□□□□ -1.49
PCDH1Q08174 AC006270.2-201ENST00000578523 652 ntBASIC5.73□□□□□ -1.49
PCDH1Q08174 OR4K8P-201ENST00000578842 1048 ntBASIC5.73□□□□□ -1.49
PCDH1Q08174 MIR4502-201ENST00000580432 81 ntBASIC5.73□□□□□ -1.49
PCDH1Q08174 UBE2L4-201ENST00000587688 464 ntBASIC5.73□□□□□ -1.49
PCDH1Q08174 POLR3GP2-201ENST00000588366 668 ntBASIC5.73□□□□□ -1.49
PCDH1Q08174 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC5.73□□□□□ -1.49
PCDH1Q08174 AC025857.2-201ENST00000602711 238 ntBASIC5.73□□□□□ -1.49
PCDH1Q08174 AC080078.3-201ENST00000605407 463 ntBASIC5.73□□□□□ -1.49
PCDH1Q08174 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC5.73□□□□□ -1.49
PCDH1Q08174 MIR6809-201ENST00000612189 116 ntBASIC5.73□□□□□ -1.49
PCDH1Q08174 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC5.73□□□□□ -1.49
PCDH1Q08174 AC084781.2-201ENST00000615568 161 ntBASIC5.73□□□□□ -1.49
PCDH1Q08174 AL158196.1-201ENST00000616786 434 ntBASIC5.73□□□□□ -1.49
PCDH1Q08174 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC5.73□□□□□ -1.49
PCDH1Q08174 MTND4LP32-201ENST00000636111 270 ntBASIC5.73□□□□□ -1.49
PCDH1Q08174 AC000095.2-202ENST00000637415 154 ntBASIC5.73□□□□□ -1.49
PCDH1Q08174 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC5.73□□□□□ -1.49
PCDH1Q08174 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
PCDH1Q08174 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC5.73□□□□□ -1.49
PCDH1Q08174 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC5.73□□□□□ -1.49
PCDH1Q08174 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
PCDH1Q08174 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
PCDH1Q08174 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
PCDH1Q08174 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
PCDH1Q08174 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
PCDH1Q08174 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
PCDH1Q08174 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
PCDH1Q08174 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC5.72□□□□□ -1.49
PCDH1Q08174 AP004289.2-201ENST00000444413 1457 ntBASIC5.72□□□□□ -1.49
PCDH1Q08174 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.72□□□□□ -1.49
PCDH1Q08174 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
PCDH1Q08174 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
PCDH1Q08174 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC5.72□□□□□ -1.49
PCDH1Q08174 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
PCDH1Q08174 AC008627.1-201ENST00000517511 1704 ntBASIC5.72□□□□□ -1.49
PCDH1Q08174 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
PCDH1Q08174 AC067945.1-201ENST00000342609 618 ntBASIC5.72□□□□□ -1.49
PCDH1Q08174 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
PCDH1Q08174 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
PCDH1Q08174 Y_RNA.445-201ENST00000384168 102 ntBASIC5.72□□□□□ -1.49
PCDH1Q08174 RNU6-463P-201ENST00000384340 107 ntBASIC5.72□□□□□ -1.49
PCDH1Q08174 SNORD116-29-201ENST00000384516 83 ntBASIC5.72□□□□□ -1.49
PCDH1Q08174 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC5.72□□□□□ -1.49
PCDH1Q08174 AC016739.1-201ENST00000405359 345 ntBASIC5.72□□□□□ -1.49
PCDH1Q08174 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
PCDH1Q08174 RN7SKP17-201ENST00000411242 351 ntBASIC5.72□□□□□ -1.49
PCDH1Q08174 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
PCDH1Q08174 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC5.72□□□□□ -1.49
PCDH1Q08174 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
PCDH1Q08174 RPS4XP5-201ENST00000419038 768 ntBASIC5.72□□□□□ -1.49
PCDH1Q08174 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC5.72□□□□□ -1.49
PCDH1Q08174 PLA2G12AP2-201ENST00000424744 264 ntBASIC5.72□□□□□ -1.49
PCDH1Q08174 AC108734.1-201ENST00000439549 399 ntBASIC5.72□□□□□ -1.49
PCDH1Q08174 AL161722.1-201ENST00000446972 1032 ntBASIC5.72□□□□□ -1.49
PCDH1Q08174 NANOGP10-201ENST00000453325 895 ntBASIC5.72□□□□□ -1.49
PCDH1Q08174 MEMO1P4-201ENST00000453590 386 ntBASIC5.72□□□□□ -1.49
PCDH1Q08174 FRG2FP-204ENST00000453982 852 ntBASIC5.72□□□□□ -1.49
PCDH1Q08174 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC5.72□□□□□ -1.49
PCDH1Q08174 AC104339.1-201ENST00000465478 348 ntBASIC5.72□□□□□ -1.49
PCDH1Q08174 PFN1P6-201ENST00000476786 399 ntBASIC5.72□□□□□ -1.49
PCDH1Q08174 RPL21P99-201ENST00000480369 423 ntBASIC5.72□□□□□ -1.49
PCDH1Q08174 AC068587.1-201ENST00000483613 781 ntBASIC5.72□□□□□ -1.49
PCDH1Q08174 AC005726.1-201ENST00000494679 427 ntBASIC5.72□□□□□ -1.49
PCDH1Q08174 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC5.72□□□□□ -1.49
PCDH1Q08174 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC5.72□□□□□ -1.49
PCDH1Q08174 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC5.72□□□□□ -1.49
PCDH1Q08174 AC004062.1-201ENST00000509926 645 ntBASIC5.72□□□□□ -1.49
PCDH1Q08174 CDV3-208ENST00000511392 554 ntTSL 5 BASIC5.72□□□□□ -1.49
PCDH1Q08174 RNU6-347P-201ENST00000516658 105 ntBASIC5.72□□□□□ -1.49
PCDH1Q08174 AC078899.1-201ENST00000521432 1185 ntBASIC5.72□□□□□ -1.49
PCDH1Q08174 AC018442.3-201ENST00000523025 183 ntBASIC5.72□□□□□ -1.49
PCDH1Q08174 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC5.72□□□□□ -1.49
PCDH1Q08174 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC5.72□□□□□ -1.49
PCDH1Q08174 AC093012.1-202ENST00000549403 582 ntBASIC5.72□□□□□ -1.49
PCDH1Q08174 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC5.72□□□□□ -1.49
PCDH1Q08174 AC091078.2-201ENST00000557145 559 ntBASIC5.72□□□□□ -1.49
PCDH1Q08174 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC5.72□□□□□ -1.49
PCDH1Q08174 AC018552.3-201ENST00000567416 561 ntBASIC5.72□□□□□ -1.49
PCDH1Q08174 AC019322.1-201ENST00000571869 389 ntBASIC5.72□□□□□ -1.49
PCDH1Q08174 AC060771.1-201ENST00000582031 164 ntBASIC5.72□□□□□ -1.49
PCDH1Q08174 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC5.72□□□□□ -1.49
PCDH1Q08174 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC5.72□□□□□ -1.49
PCDH1Q08174 AC016925.2-201ENST00000605108 242 ntBASIC5.72□□□□□ -1.49
PCDH1Q08174 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC5.72□□□□□ -1.49
PCDH1Q08174 AL080274.1-201ENST00000605565 220 ntBASIC5.72□□□□□ -1.49
PCDH1Q08174 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC5.72□□□□□ -1.49
PCDH1Q08174 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC5.72□□□□□ -1.49
PCDH1Q08174 AC092266.1-201ENST00000610958 165 ntBASIC5.72□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 114.7 ms