Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
RHBDL3P58872 RNA5SP36-201ENST00000410197 133 ntBASIC5.16□□□□□ -1.58
RHBDL3P58872 CTSL3P-202ENST00000412179 788 ntBASIC5.16□□□□□ -1.58
RHBDL3P58872 AL592310.1-201ENST00000414330 671 ntBASIC5.16□□□□□ -1.58
RHBDL3P58872 USP9YP11-201ENST00000427537 717 ntBASIC5.16□□□□□ -1.58
RHBDL3P58872 ARL6IP1P2-201ENST00000431356 563 ntBASIC5.16□□□□□ -1.58
RHBDL3P58872 RPL34P6-201ENST00000432390 345 ntBASIC5.16□□□□□ -1.58
RHBDL3P58872 AL512326.1-201ENST00000443050 721 ntBASIC5.16□□□□□ -1.58
RHBDL3P58872 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC5.16□□□□□ -1.58
RHBDL3P58872 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC5.16□□□□□ -1.58
RHBDL3P58872 AC092757.1-201ENST00000467293 467 ntBASIC5.16□□□□□ -1.58
RHBDL3P58872 AC108751.2-201ENST00000469993 231 ntBASIC5.16□□□□□ -1.58
RHBDL3P58872 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
RHBDL3P58872 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC5.16□□□□□ -1.58
RHBDL3P58872 AC093767.1-201ENST00000504523 156 ntBASIC5.16□□□□□ -1.58
RHBDL3P58872 AC109445.1-201ENST00000512356 383 ntBASIC5.16□□□□□ -1.58
RHBDL3P58872 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC5.16□□□□□ -1.58
RHBDL3P58872 AC110760.3-202ENST00000515177 371 ntBASIC5.16□□□□□ -1.58
RHBDL3P58872 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC5.16□□□□□ -1.58
RHBDL3P58872 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC5.16□□□□□ -1.58
RHBDL3P58872 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
RHBDL3P58872 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
RHBDL3P58872 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC5.16□□□□□ -1.58
RHBDL3P58872 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC5.16□□□□□ -1.58
RHBDL3P58872 HIGD1AP17-201ENST00000554576 276 ntBASIC5.16□□□□□ -1.58
RHBDL3P58872 AC107954.1-201ENST00000565906 727 ntBASIC5.16□□□□□ -1.58
RHBDL3P58872 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
RHBDL3P58872 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
RHBDL3P58872 MIR4760-201ENST00000585040 80 ntBASIC5.16□□□□□ -1.58
RHBDL3P58872 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC5.16□□□□□ -1.58
RHBDL3P58872 MRPS35P3-201ENST00000603189 709 ntBASIC5.16□□□□□ -1.58
RHBDL3P58872 AC009974.1-201ENST00000608881 455 ntBASIC5.16□□□□□ -1.58
RHBDL3P58872 AC007546.2-201ENST00000623996 360 ntBASIC5.16□□□□□ -1.58
RHBDL3P58872 AC120349.2-201ENST00000625002 298 ntBASIC5.16□□□□□ -1.58
RHBDL3P58872 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC5.16□□□□□ -1.58
RHBDL3P58872 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
RHBDL3P58872 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
RHBDL3P58872 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC5.16□□□□□ -1.58
RHBDL3P58872 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.15□□□□□ -1.58
RHBDL3P58872 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.15□□□□□ -1.58
RHBDL3P58872 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC5.15□□□□□ -1.58
RHBDL3P58872 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
RHBDL3P58872 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
RHBDL3P58872 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC5.15□□□□□ -1.58
RHBDL3P58872 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.58
RHBDL3P58872 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC5.15□□□□□ -1.58
RHBDL3P58872 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC5.15□□□□□ -1.58
RHBDL3P58872 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.58
RHBDL3P58872 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
RHBDL3P58872 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.59
RHBDL3P58872 MIR372-201ENST00000362225 67 ntBASIC5.15□□□□□ -1.59
RHBDL3P58872 RN7SKP280-201ENST00000364196 304 ntBASIC5.15□□□□□ -1.59
RHBDL3P58872 RNA5SP175-201ENST00000364275 119 ntBASIC5.15□□□□□ -1.59
RHBDL3P58872 RPL31P1-201ENST00000398116 372 ntBASIC5.15□□□□□ -1.59
RHBDL3P58872 RN7SKP167-201ENST00000411047 285 ntBASIC5.15□□□□□ -1.59
RHBDL3P58872 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC5.15□□□□□ -1.59
RHBDL3P58872 AL356095.1-201ENST00000417217 199 ntBASIC5.15□□□□□ -1.59
RHBDL3P58872 HMGB1P49-201ENST00000418882 569 ntBASIC5.15□□□□□ -1.59
RHBDL3P58872 RPL17P36-201ENST00000420302 549 ntBASIC5.15□□□□□ -1.59
RHBDL3P58872 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
RHBDL3P58872 AL050321.1-201ENST00000432363 400 ntBASIC5.15□□□□□ -1.59
RHBDL3P58872 KCTD10P1-201ENST00000434203 625 ntBASIC5.15□□□□□ -1.59
RHBDL3P58872 Z80107.1-201ENST00000436830 412 ntBASIC5.15□□□□□ -1.59
RHBDL3P58872 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC5.15□□□□□ -1.59
RHBDL3P58872 MTND2P20-201ENST00000440805 661 ntBASIC5.15□□□□□ -1.59
RHBDL3P58872 VN1R10P-201ENST00000447106 875 ntBASIC5.15□□□□□ -1.59
RHBDL3P58872 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC5.15□□□□□ -1.59
RHBDL3P58872 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC5.15□□□□□ -1.59
RHBDL3P58872 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC5.15□□□□□ -1.59
RHBDL3P58872 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC5.15□□□□□ -1.59
RHBDL3P58872 AC022795.1-201ENST00000473808 480 ntBASIC5.15□□□□□ -1.59
RHBDL3P58872 RPS4XP18-201ENST00000495480 763 ntBASIC5.15□□□□□ -1.59
RHBDL3P58872 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC5.15□□□□□ -1.59
RHBDL3P58872 SETP14-201ENST00000497538 873 ntBASIC5.15□□□□□ -1.59
RHBDL3P58872 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC5.15□□□□□ -1.59
RHBDL3P58872 IGKV2D-36-201ENST00000518643 226 ntBASIC5.15□□□□□ -1.59
RHBDL3P58872 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC5.15□□□□□ -1.59
RHBDL3P58872 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC5.15□□□□□ -1.59
RHBDL3P58872 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC5.15□□□□□ -1.59
RHBDL3P58872 OR4K7P-201ENST00000580232 945 ntBASIC5.15□□□□□ -1.59
RHBDL3P58872 RPL7P50-201ENST00000600588 727 ntBASIC5.15□□□□□ -1.59
RHBDL3P58872 AL450336.1-201ENST00000605180 586 ntBASIC5.15□□□□□ -1.59
RHBDL3P58872 AL451074.6-201ENST00000608512 729 ntBASIC5.15□□□□□ -1.59
RHBDL3P58872 MIR6867-201ENST00000610636 67 ntBASIC5.15□□□□□ -1.59
RHBDL3P58872 AC073968.1-201ENST00000618594 637 ntBASIC5.15□□□□□ -1.59
RHBDL3P58872 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC5.15□□□□□ -1.59
RHBDL3P58872 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.59
RHBDL3P58872 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC5.15□□□□□ -1.59
RHBDL3P58872 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC5.15□□□□□ -1.59
RHBDL3P58872 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC5.15□□□□□ -1.59
RHBDL3P58872 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
RHBDL3P58872 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
RHBDL3P58872 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
RHBDL3P58872 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
RHBDL3P58872 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
RHBDL3P58872 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.14□□□□□ -1.59
RHBDL3P58872 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC5.14□□□□□ -1.59
RHBDL3P58872 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
RHBDL3P58872 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
RHBDL3P58872 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 81.9 ms