Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC4.53□□□□□ -1.68
HDAC4P56524 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.53□□□□□ -1.68
HDAC4P56524 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC4.53□□□□□ -1.68
HDAC4P56524 AL391219.1-201ENST00000422570 483 ntBASIC4.53□□□□□ -1.68
HDAC4P56524 AC093698.1-201ENST00000423843 571 ntBASIC4.53□□□□□ -1.68
HDAC4P56524 DPRXP1-201ENST00000426312 460 ntBASIC4.53□□□□□ -1.68
HDAC4P56524 TRAPPC2P9-201ENST00000434556 343 ntBASIC4.53□□□□□ -1.68
HDAC4P56524 GTF2IP7-202ENST00000436677 309 ntBASIC4.53□□□□□ -1.68
HDAC4P56524 PPIAP17-201ENST00000438507 471 ntBASIC4.53□□□□□ -1.68
HDAC4P56524 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC4.53□□□□□ -1.68
HDAC4P56524 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC4.53□□□□□ -1.68
HDAC4P56524 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC4.53□□□□□ -1.68
HDAC4P56524 AC079776.3-201ENST00000450665 370 ntBASIC4.53□□□□□ -1.68
HDAC4P56524 RN7SL98P-201ENST00000462271 300 ntBASIC4.53□□□□□ -1.68
HDAC4P56524 RPL21P71-201ENST00000465598 459 ntBASIC4.53□□□□□ -1.68
HDAC4P56524 AC013356.1-201ENST00000489027 564 ntBASIC4.53□□□□□ -1.68
HDAC4P56524 AC092045.1-201ENST00000495716 1231 ntBASIC4.53□□□□□ -1.68
HDAC4P56524 HMGB1P21-201ENST00000502313 581 ntBASIC4.53□□□□□ -1.68
HDAC4P56524 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC4.53□□□□□ -1.68
HDAC4P56524 AC008694.2-201ENST00000517591 306 ntBASIC4.53□□□□□ -1.68
HDAC4P56524 AF279873.1-201ENST00000523393 313 ntBASIC4.53□□□□□ -1.68
HDAC4P56524 AP001317.1-201ENST00000531194 960 ntBASIC4.53□□□□□ -1.68
HDAC4P56524 ZNF321P-202ENST00000550843 495 ntBASIC4.53□□□□□ -1.68
HDAC4P56524 AC004217.3-201ENST00000551552 878 ntBASIC4.53□□□□□ -1.68
HDAC4P56524 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.53□□□□□ -1.68
HDAC4P56524 AADACP1-206ENST00000561502 1193 ntBASIC4.53□□□□□ -1.68
HDAC4P56524 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC4.53□□□□□ -1.68
HDAC4P56524 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC4.53□□□□□ -1.68
HDAC4P56524 MIR3912-201ENST00000577566 105 ntBASIC4.53□□□□□ -1.68
HDAC4P56524 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC4.53□□□□□ -1.68
HDAC4P56524 AC067852.4-201ENST00000590314 478 ntBASIC4.53□□□□□ -1.68
HDAC4P56524 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
HDAC4P56524 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC4.53□□□□□ -1.68
HDAC4P56524 AC020910.2-201ENST00000603635 610 ntBASIC4.53□□□□□ -1.68
HDAC4P56524 AL390816.3-201ENST00000604527 1066 ntBASIC4.53□□□□□ -1.68
HDAC4P56524 AC113403.1-201ENST00000604910 193 ntBASIC4.53□□□□□ -1.68
HDAC4P56524 AP003392.5-201ENST00000607857 415 ntBASIC4.53□□□□□ -1.68
HDAC4P56524 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC4.53□□□□□ -1.68
HDAC4P56524 AL021997.2-201ENST00000615674 271 ntBASIC4.53□□□□□ -1.68
HDAC4P56524 uc_338.13-201ENST00000618243 179 ntBASIC4.53□□□□□ -1.68
HDAC4P56524 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.53□□□□□ -1.68
HDAC4P56524 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
HDAC4P56524 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC4.53□□□□□ -1.68
HDAC4P56524 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
HDAC4P56524 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.53□□□□□ -1.68
HDAC4P56524 XPOTP1-201ENST00000443317 2398 ntBASIC4.53□□□□□ -1.68
HDAC4P56524 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.53□□□□□ -1.69
HDAC4P56524 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
HDAC4P56524 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.52□□□□□ -1.69
HDAC4P56524 NOL8P1-201ENST00000508336 3529 ntBASIC4.52□□□□□ -1.69
HDAC4P56524 AC067945.1-201ENST00000342609 618 ntBASIC4.52□□□□□ -1.69
HDAC4P56524 RNA5SP52-201ENST00000362448 134 ntBASIC4.52□□□□□ -1.69
HDAC4P56524 MIR93-201ENST00000385024 80 ntBASIC4.52□□□□□ -1.69
HDAC4P56524 SNORD66.1-201ENST00000391230 76 ntBASIC4.52□□□□□ -1.69
HDAC4P56524 VN1R8P-201ENST00000407739 893 ntBASIC4.52□□□□□ -1.69
HDAC4P56524 MIR1183-201ENST00000408856 89 ntBASIC4.52□□□□□ -1.69
HDAC4P56524 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC4.52□□□□□ -1.69
HDAC4P56524 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.52□□□□□ -1.69
HDAC4P56524 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC4.52□□□□□ -1.69
HDAC4P56524 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC4.52□□□□□ -1.69
HDAC4P56524 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC4.52□□□□□ -1.69
HDAC4P56524 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC4.52□□□□□ -1.69
HDAC4P56524 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC4.52□□□□□ -1.69
HDAC4P56524 RPL23AP52-201ENST00000439311 478 ntBASIC4.52□□□□□ -1.69
HDAC4P56524 AC004865.1-201ENST00000442276 1003 ntBASIC4.52□□□□□ -1.69
HDAC4P56524 AL451050.1-201ENST00000450126 415 ntBASIC4.52□□□□□ -1.69
HDAC4P56524 RPL23AP15-201ENST00000450202 459 ntBASIC4.52□□□□□ -1.69
HDAC4P56524 ABCF2P2-201ENST00000450549 296 ntBASIC4.52□□□□□ -1.69
HDAC4P56524 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC4.52□□□□□ -1.69
HDAC4P56524 RPL7P22-201ENST00000466005 733 ntBASIC4.52□□□□□ -1.69
HDAC4P56524 AC011979.1-201ENST00000472300 483 ntBASIC4.52□□□□□ -1.69
HDAC4P56524 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC4.52□□□□□ -1.69
HDAC4P56524 DYNLL1P6-201ENST00000503440 264 ntBASIC4.52□□□□□ -1.69
HDAC4P56524 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.52□□□□□ -1.69
HDAC4P56524 AC048346.1-201ENST00000510247 144 ntBASIC4.52□□□□□ -1.69
HDAC4P56524 AC015795.1-201ENST00000513669 327 ntBASIC4.52□□□□□ -1.69
HDAC4P56524 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC4.52□□□□□ -1.69
HDAC4P56524 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC4.52□□□□□ -1.69
HDAC4P56524 IGLV3-26-201ENST00000520756 302 ntBASIC4.52□□□□□ -1.69
HDAC4P56524 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.52□□□□□ -1.69
HDAC4P56524 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC4.52□□□□□ -1.69
HDAC4P56524 AC009643.1-201ENST00000532030 391 ntBASIC4.52□□□□□ -1.69
HDAC4P56524 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC4.52□□□□□ -1.69
HDAC4P56524 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC4.52□□□□□ -1.69
HDAC4P56524 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.52□□□□□ -1.69
HDAC4P56524 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC4.52□□□□□ -1.69
HDAC4P56524 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC4.52□□□□□ -1.69
HDAC4P56524 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC4.52□□□□□ -1.69
HDAC4P56524 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC4.52□□□□□ -1.69
HDAC4P56524 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.52□□□□□ -1.69
HDAC4P56524 AC005191.1-201ENST00000603950 358 ntBASIC4.52□□□□□ -1.69
HDAC4P56524 AC069545.1-201ENST00000605671 358 ntBASIC4.52□□□□□ -1.69
HDAC4P56524 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC4.52□□□□□ -1.69
HDAC4P56524 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC4.52□□□□□ -1.69
HDAC4P56524 MIR6864-201ENST00000617935 70 ntBASIC4.52□□□□□ -1.69
HDAC4P56524 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.52□□□□□ -1.69
HDAC4P56524 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.52□□□□□ -1.69
HDAC4P56524 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
HDAC4P56524 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
HDAC4P56524 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 125.5 ms