Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 SNORD115-48-201ENST00000364764 76 ntBASIC3.69□□□□□ -1.82
CDH6P55285 RNU6-356P-201ENST00000384140 107 ntBASIC3.69□□□□□ -1.82
CDH6P55285 PTMAP5-201ENST00000393073 333 ntBASIC3.69□□□□□ -1.82
CDH6P55285 HMGB1P10-201ENST00000395823 563 ntBASIC3.69□□□□□ -1.82
CDH6P55285 RPL21P17-201ENST00000397467 475 ntBASIC3.69□□□□□ -1.82
CDH6P55285 DNAJC19P6-201ENST00000401853 280 ntBASIC3.69□□□□□ -1.82
CDH6P55285 MIR1303-201ENST00000408625 86 ntBASIC3.69□□□□□ -1.82
CDH6P55285 VTA1P1-201ENST00000414044 866 ntBASIC3.69□□□□□ -1.82
CDH6P55285 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.69□□□□□ -1.82
CDH6P55285 RPL17P36-201ENST00000420302 549 ntBASIC3.69□□□□□ -1.82
CDH6P55285 AC092017.2-201ENST00000427600 362 ntBASIC3.69□□□□□ -1.82
CDH6P55285 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC3.69□□□□□ -1.82
CDH6P55285 ZNF965P-201ENST00000432501 817 ntBASIC3.69□□□□□ -1.82
CDH6P55285 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
CDH6P55285 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CDH6P55285 AL359073.1-201ENST00000448036 403 ntBASIC3.69□□□□□ -1.82
CDH6P55285 AC020898.1-201ENST00000474167 787 ntBASIC3.69□□□□□ -1.82
CDH6P55285 AL049830.2-201ENST00000480072 201 ntBASIC3.69□□□□□ -1.82
CDH6P55285 ACTR3P3-201ENST00000480448 893 ntBASIC3.69□□□□□ -1.82
CDH6P55285 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC3.69□□□□□ -1.82
CDH6P55285 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC3.69□□□□□ -1.82
CDH6P55285 AC021146.1-201ENST00000511202 716 ntBASIC3.69□□□□□ -1.82
CDH6P55285 MTCO1P30-201ENST00000515244 580 ntBASIC3.69□□□□□ -1.82
CDH6P55285 SNORA70.18-201ENST00000516696 98 ntBASIC3.69□□□□□ -1.82
CDH6P55285 TBCA-206ENST00000518338 551 ntTSL 2 BASIC3.69□□□□□ -1.82
CDH6P55285 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CDH6P55285 AP006245.1-201ENST00000522549 120 ntBASIC3.69□□□□□ -1.82
CDH6P55285 AC004923.2-201ENST00000529649 369 ntBASIC3.69□□□□□ -1.82
CDH6P55285 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC3.69□□□□□ -1.82
CDH6P55285 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC3.69□□□□□ -1.82
CDH6P55285 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CDH6P55285 CENPUP2-201ENST00000555897 1186 ntBASIC3.69□□□□□ -1.82
CDH6P55285 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CDH6P55285 MIR5047-201ENST00000579212 100 ntBASIC3.69□□□□□ -1.82
CDH6P55285 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC3.69□□□□□ -1.82
CDH6P55285 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC3.69□□□□□ -1.82
CDH6P55285 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC3.69□□□□□ -1.82
CDH6P55285 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC3.69□□□□□ -1.82
CDH6P55285 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC3.69□□□□□ -1.82
CDH6P55285 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.69□□□□□ -1.82
CDH6P55285 BNIP3P38-201ENST00000601117 544 ntBASIC3.69□□□□□ -1.82
CDH6P55285 NTAN1P1-201ENST00000603150 646 ntBASIC3.69□□□□□ -1.82
CDH6P55285 BX322635.1-201ENST00000605804 496 ntBASIC3.69□□□□□ -1.82
CDH6P55285 AP003355.3-201ENST00000623465 114 ntBASIC3.69□□□□□ -1.82
CDH6P55285 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.69□□□□□ -1.82
CDH6P55285 AC090337.1-201ENST00000579651 2074 ntBASIC3.69□□□□□ -1.82
CDH6P55285 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.69□□□□□ -1.82
CDH6P55285 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CDH6P55285 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CDH6P55285 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CDH6P55285 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CDH6P55285 MIR554-201ENST00000384874 96 ntBASIC3.68□□□□□ -1.82
CDH6P55285 RNU2-17P-201ENST00000410290 190 ntBASIC3.68□□□□□ -1.82
CDH6P55285 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC3.68□□□□□ -1.82
CDH6P55285 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.68□□□□□ -1.82
CDH6P55285 XKRYP4-201ENST00000414395 483 ntBASIC3.68□□□□□ -1.82
CDH6P55285 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC3.68□□□□□ -1.82
CDH6P55285 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.68□□□□□ -1.82
CDH6P55285 KCTD10P1-201ENST00000434203 625 ntBASIC3.68□□□□□ -1.82
CDH6P55285 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC3.68□□□□□ -1.82
CDH6P55285 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CDH6P55285 RPS7P5-201ENST00000441482 581 ntBASIC3.68□□□□□ -1.82
CDH6P55285 XKRYP5-201ENST00000449659 483 ntBASIC3.68□□□□□ -1.82
CDH6P55285 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC3.68□□□□□ -1.82
CDH6P55285 SNORD105B-201ENST00000458770 79 ntBASIC3.68□□□□□ -1.82
CDH6P55285 AC146507.1-201ENST00000468335 354 ntBASIC3.68□□□□□ -1.82
CDH6P55285 SNRPGP3-201ENST00000469405 227 ntBASIC3.68□□□□□ -1.82
CDH6P55285 AC104689.1-201ENST00000473356 768 ntBASIC3.68□□□□□ -1.82
CDH6P55285 FCF1P3-201ENST00000496394 590 ntBASIC3.68□□□□□ -1.82
CDH6P55285 AL035404.1-201ENST00000497982 568 ntBASIC3.68□□□□□ -1.82
CDH6P55285 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC3.68□□□□□ -1.82
CDH6P55285 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC3.68□□□□□ -1.82
CDH6P55285 RN7SKP283-201ENST00000517197 270 ntBASIC3.68□□□□□ -1.82
CDH6P55285 PAICSP4-201ENST00000517543 1253 ntBASIC3.68□□□□□ -1.82
CDH6P55285 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC3.68□□□□□ -1.82
CDH6P55285 DUXAP6-201ENST00000553858 601 ntBASIC3.68□□□□□ -1.82
CDH6P55285 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC3.68□□□□□ -1.82
CDH6P55285 AC006130.2-201ENST00000586202 326 ntBASIC3.68□□□□□ -1.82
CDH6P55285 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC3.68□□□□□ -1.82
CDH6P55285 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC3.68□□□□□ -1.82
CDH6P55285 AC020914.6-201ENST00000594327 272 ntBASIC3.68□□□□□ -1.82
CDH6P55285 AL121772.2-201ENST00000614331 297 ntBASIC3.68□□□□□ -1.82
CDH6P55285 AC025016.1-201ENST00000616746 682 ntBASIC3.68□□□□□ -1.82
CDH6P55285 AC022149.2-201ENST00000621061 203 ntBASIC3.68□□□□□ -1.82
CDH6P55285 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC3.68□□□□□ -1.82
CDH6P55285 AC000367.1-201ENST00000452711 1766 ntBASIC3.68□□□□□ -1.82
CDH6P55285 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC3.68□□□□□ -1.82
CDH6P55285 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CDH6P55285 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CDH6P55285 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.67□□□□□ -1.82
CDH6P55285 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CDH6P55285 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
CDH6P55285 TAF9BP2-201ENST00000400856 499 ntBASIC3.67□□□□□ -1.82
CDH6P55285 Z98941.1-201ENST00000407764 100 ntBASIC3.67□□□□□ -1.82
CDH6P55285 RN7SKP53-201ENST00000411337 315 ntBASIC3.67□□□□□ -1.82
CDH6P55285 RHEBP3-201ENST00000411920 351 ntBASIC3.67□□□□□ -1.82
CDH6P55285 AC009237.5-201ENST00000414271 501 ntBASIC3.67□□□□□ -1.82
CDH6P55285 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.67□□□□□ -1.82
CDH6P55285 NUP35P2-201ENST00000416748 943 ntBASIC3.67□□□□□ -1.82
CDH6P55285 AC068533.1-201ENST00000418542 415 ntBASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 214.4 ms