Protein–RNA interactions for Protein: P55160

NCKAP1L, Nck-associated protein 1-like, humanhuman

Predictions only

Length 1,127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1LP55160 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC5.5□□□□□ -1.53
NCKAP1LP55160 AC138915.3-201ENST00000562908 1389 ntBASIC5.5□□□□□ -1.53
NCKAP1LP55160 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
NCKAP1LP55160 CDR1-202ENST00000625883 1485 ntBASIC5.5□□□□□ -1.53
NCKAP1LP55160 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC5.5□□□□□ -1.53
NCKAP1LP55160 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
NCKAP1LP55160 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
NCKAP1LP55160 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
NCKAP1LP55160 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.5□□□□□ -1.53
NCKAP1LP55160 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
NCKAP1LP55160 AC107982.1-201ENST00000507171 1300 ntBASIC5.49□□□□□ -1.53
NCKAP1LP55160 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
NCKAP1LP55160 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
NCKAP1LP55160 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC5.49□□□□□ -1.53
NCKAP1LP55160 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC5.49□□□□□ -1.53
NCKAP1LP55160 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.49□□□□□ -1.53
NCKAP1LP55160 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC5.49□□□□□ -1.53
NCKAP1LP55160 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
NCKAP1LP55160 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
NCKAP1LP55160 AC011755.1-201ENST00000623763 2049 ntBASIC5.49□□□□□ -1.53
NCKAP1LP55160 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
NCKAP1LP55160 NAP1L4P1-201ENST00000319092 1157 ntBASIC5.49□□□□□ -1.53
NCKAP1LP55160 RNU6-462P-201ENST00000362659 105 ntBASIC5.49□□□□□ -1.53
NCKAP1LP55160 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
NCKAP1LP55160 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
NCKAP1LP55160 Y_RNA.460-201ENST00000384255 102 ntBASIC5.49□□□□□ -1.53
NCKAP1LP55160 Z97832.1-201ENST00000402490 328 ntBASIC5.49□□□□□ -1.53
NCKAP1LP55160 RPS3AP3-201ENST00000411933 242 ntBASIC5.49□□□□□ -1.53
NCKAP1LP55160 AC109780.2-201ENST00000413467 845 ntBASIC5.49□□□□□ -1.53
NCKAP1LP55160 USP9YP27-201ENST00000418455 438 ntBASIC5.49□□□□□ -1.53
NCKAP1LP55160 AC062016.2-201ENST00000420950 676 ntBASIC5.49□□□□□ -1.53
NCKAP1LP55160 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
NCKAP1LP55160 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC5.49□□□□□ -1.53
NCKAP1LP55160 AL451074.3-201ENST00000437709 472 ntBASIC5.49□□□□□ -1.53
NCKAP1LP55160 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC5.49□□□□□ -1.53
NCKAP1LP55160 USP9YP12-201ENST00000450481 570 ntBASIC5.49□□□□□ -1.53
NCKAP1LP55160 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC5.49□□□□□ -1.53
NCKAP1LP55160 KCTD9P5-201ENST00000504141 1170 ntBASIC5.49□□□□□ -1.53
NCKAP1LP55160 AC022447.3-201ENST00000506865 495 ntBASIC5.49□□□□□ -1.53
NCKAP1LP55160 MRPS33P2-201ENST00000507850 322 ntBASIC5.49□□□□□ -1.53
NCKAP1LP55160 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC5.49□□□□□ -1.53
NCKAP1LP55160 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC5.49□□□□□ -1.53
NCKAP1LP55160 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC5.49□□□□□ -1.53
NCKAP1LP55160 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC5.49□□□□□ -1.53
NCKAP1LP55160 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC5.49□□□□□ -1.53
NCKAP1LP55160 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC5.49□□□□□ -1.53
NCKAP1LP55160 AL512310.1-201ENST00000548639 172 ntBASIC5.49□□□□□ -1.53
NCKAP1LP55160 ARL2BPP2-201ENST00000550907 489 ntBASIC5.49□□□□□ -1.53
NCKAP1LP55160 LSM3P2-201ENST00000551246 273 ntBASIC5.49□□□□□ -1.53
NCKAP1LP55160 AC125611.2-201ENST00000551907 647 ntBASIC5.49□□□□□ -1.53
NCKAP1LP55160 CBX3P5-201ENST00000552017 521 ntBASIC5.49□□□□□ -1.53
NCKAP1LP55160 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC5.49□□□□□ -1.53
NCKAP1LP55160 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC5.49□□□□□ -1.53
NCKAP1LP55160 AC010928.3-201ENST00000587712 541 ntBASIC5.49□□□□□ -1.53
NCKAP1LP55160 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC5.49□□□□□ -1.53
NCKAP1LP55160 AC006363.1-201ENST00000603806 463 ntBASIC5.49□□□□□ -1.53
NCKAP1LP55160 AL035413.2-201ENST00000604801 525 ntBASIC5.49□□□□□ -1.53
NCKAP1LP55160 AC069304.2-201ENST00000605154 435 ntBASIC5.49□□□□□ -1.53
NCKAP1LP55160 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC5.49□□□□□ -1.53
NCKAP1LP55160 AC133644.2-201ENST00000608142 540 ntBASIC5.49□□□□□ -1.53
NCKAP1LP55160 AC234782.5-201ENST00000617723 324 ntBASIC5.49□□□□□ -1.53
NCKAP1LP55160 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC5.49□□□□□ -1.53
NCKAP1LP55160 RNF123-214ENST00000629802 207 ntTSL 5 BASIC5.49□□□□□ -1.53
NCKAP1LP55160 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC5.49□□□□□ -1.53
NCKAP1LP55160 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
NCKAP1LP55160 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
NCKAP1LP55160 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
NCKAP1LP55160 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
NCKAP1LP55160 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
NCKAP1LP55160 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
NCKAP1LP55160 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC5.48□□□□□ -1.53
NCKAP1LP55160 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC5.48□□□□□ -1.53
NCKAP1LP55160 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
NCKAP1LP55160 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
NCKAP1LP55160 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
NCKAP1LP55160 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC5.48□□□□□ -1.53
NCKAP1LP55160 INTS6P1-201ENST00000504674 2530 ntBASIC5.48□□□□□ -1.53
NCKAP1LP55160 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
NCKAP1LP55160 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.48□□□□□ -1.53
NCKAP1LP55160 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.48□□□□□ -1.53
NCKAP1LP55160 AC073136.1-201ENST00000449426 2884 ntBASIC5.48□□□□□ -1.53
NCKAP1LP55160 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
NCKAP1LP55160 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
NCKAP1LP55160 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
NCKAP1LP55160 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
NCKAP1LP55160 RNA5SP123-201ENST00000363244 119 ntBASIC5.48□□□□□ -1.53
NCKAP1LP55160 RNU6-1066P-201ENST00000363573 105 ntBASIC5.48□□□□□ -1.53
NCKAP1LP55160 Y_RNA.326-201ENST00000365176 113 ntBASIC5.48□□□□□ -1.53
NCKAP1LP55160 RNU6-332P-201ENST00000391193 108 ntBASIC5.48□□□□□ -1.53
NCKAP1LP55160 AL589647.1-201ENST00000402485 466 ntBASIC5.48□□□□□ -1.53
NCKAP1LP55160 AL590004.1-201ENST00000405321 300 ntBASIC5.48□□□□□ -1.53
NCKAP1LP55160 RNU4-55P-201ENST00000410731 137 ntBASIC5.48□□□□□ -1.53
NCKAP1LP55160 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC5.48□□□□□ -1.53
NCKAP1LP55160 AL354751.2-201ENST00000415471 210 ntBASIC5.48□□□□□ -1.53
NCKAP1LP55160 RPS3AP9-201ENST00000417027 792 ntBASIC5.48□□□□□ -1.53
NCKAP1LP55160 AF186996.5-201ENST00000418098 904 ntBASIC5.48□□□□□ -1.53
NCKAP1LP55160 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC5.48□□□□□ -1.53
NCKAP1LP55160 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC5.48□□□□□ -1.53
NCKAP1LP55160 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC5.48□□□□□ -1.53
NCKAP1LP55160 USP9YP9-201ENST00000429406 715 ntBASIC5.48□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 83.3 ms