Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 AC009318.3-201ENST00000616916 503 ntBASIC4.04□□□□□ -1.76
PDX1P52945 AC131238.1-201ENST00000617135 328 ntBASIC4.04□□□□□ -1.76
PDX1P52945 AC243756.2-201ENST00000618406 463 ntBASIC4.04□□□□□ -1.76
PDX1P52945 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.04□□□□□ -1.76
PDX1P52945 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
PDX1P52945 AC006927.4-201ENST00000639187 543 ntBASIC4.04□□□□□ -1.76
PDX1P52945 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
PDX1P52945 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
PDX1P52945 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.04□□□□□ -1.76
PDX1P52945 AL118496.1-201ENST00000440201 1812 ntBASIC4.04□□□□□ -1.76
PDX1P52945 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.04□□□□□ -1.76
PDX1P52945 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.03□□□□□ -1.76
PDX1P52945 AC105074.1-201ENST00000623380 3095 ntBASIC4.03□□□□□ -1.76
PDX1P52945 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
PDX1P52945 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
PDX1P52945 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.03□□□□□ -1.76
PDX1P52945 OR11H4-201ENST00000315409 1082 ntBASIC4.03□□□□□ -1.76
PDX1P52945 SNORA71.3-201ENST00000362582 128 ntBASIC4.03□□□□□ -1.76
PDX1P52945 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
PDX1P52945 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.03□□□□□ -1.76
PDX1P52945 CGA-201ENST00000369582 729 ntTSL 5 BASIC4.03□□□□□ -1.76
PDX1P52945 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.76
PDX1P52945 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
PDX1P52945 MIR217-201ENST00000384817 110 ntBASIC4.03□□□□□ -1.76
PDX1P52945 SNORD65.1-201ENST00000390889 71 ntBASIC4.03□□□□□ -1.76
PDX1P52945 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC4.03□□□□□ -1.76
PDX1P52945 RNA5SP44-201ENST00000410446 133 ntBASIC4.03□□□□□ -1.76
PDX1P52945 AL160275.2-201ENST00000412010 394 ntBASIC4.03□□□□□ -1.76
PDX1P52945 KRR1P1-201ENST00000419430 803 ntBASIC4.03□□□□□ -1.76
PDX1P52945 AC009237.2-201ENST00000421358 284 ntBASIC4.03□□□□□ -1.76
PDX1P52945 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
PDX1P52945 RPL12P46-201ENST00000436610 195 ntBASIC4.03□□□□□ -1.76
PDX1P52945 GTF2IP7-202ENST00000436677 309 ntBASIC4.03□□□□□ -1.76
PDX1P52945 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC4.03□□□□□ -1.76
PDX1P52945 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC4.03□□□□□ -1.76
PDX1P52945 AL358232.1-201ENST00000448030 501 ntBASIC4.03□□□□□ -1.76
PDX1P52945 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC4.03□□□□□ -1.76
PDX1P52945 RPL21P71-201ENST00000465598 459 ntBASIC4.03□□□□□ -1.76
PDX1P52945 RPL23AP2-201ENST00000471227 466 ntBASIC4.03□□□□□ -1.76
PDX1P52945 AF213884.1-201ENST00000488102 463 ntBASIC4.03□□□□□ -1.76
PDX1P52945 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
PDX1P52945 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
PDX1P52945 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
PDX1P52945 AC113347.3-201ENST00000509113 148 ntBASIC4.03□□□□□ -1.76
PDX1P52945 AC048346.1-201ENST00000510247 144 ntBASIC4.03□□□□□ -1.76
PDX1P52945 AC112673.1-201ENST00000513168 575 ntBASIC4.03□□□□□ -1.76
PDX1P52945 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
PDX1P52945 RN7SKP287-201ENST00000516546 266 ntBASIC4.03□□□□□ -1.76
PDX1P52945 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC4.03□□□□□ -1.76
PDX1P52945 PHBP17-201ENST00000528576 541 ntBASIC4.03□□□□□ -1.76
PDX1P52945 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC4.03□□□□□ -1.76
PDX1P52945 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC4.03□□□□□ -1.76
PDX1P52945 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC4.03□□□□□ -1.76
PDX1P52945 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC4.03□□□□□ -1.76
PDX1P52945 AADACP1-206ENST00000561502 1193 ntBASIC4.03□□□□□ -1.76
PDX1P52945 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC4.03□□□□□ -1.76
PDX1P52945 EIF5A2P1-201ENST00000564027 460 ntBASIC4.03□□□□□ -1.76
PDX1P52945 MTND6P33-201ENST00000571794 183 ntBASIC4.03□□□□□ -1.76
PDX1P52945 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC4.03□□□□□ -1.76
PDX1P52945 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC4.03□□□□□ -1.76
PDX1P52945 AC091057.2-201ENST00000602594 792 ntBASIC4.03□□□□□ -1.76
PDX1P52945 AC093424.1-201ENST00000604999 338 ntBASIC4.03□□□□□ -1.76
PDX1P52945 AL451086.1-201ENST00000605596 223 ntBASIC4.03□□□□□ -1.76
PDX1P52945 AC016877.3-201ENST00000606778 504 ntBASIC4.03□□□□□ -1.76
PDX1P52945 AC092106.3-201ENST00000611308 722 ntBASIC4.03□□□□□ -1.76
PDX1P52945 AL158196.1-201ENST00000616786 434 ntBASIC4.03□□□□□ -1.76
PDX1P52945 AC009159.2-201ENST00000617603 606 ntBASIC4.03□□□□□ -1.76
PDX1P52945 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC4.03□□□□□ -1.76
PDX1P52945 AL157770.1-201ENST00000623049 439 ntBASIC4.03□□□□□ -1.76
PDX1P52945 AC019278.1-201ENST00000623516 479 ntBASIC4.03□□□□□ -1.76
PDX1P52945 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC4.03□□□□□ -1.76
PDX1P52945 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
PDX1P52945 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
PDX1P52945 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
PDX1P52945 KPNA2P2-201ENST00000419546 1489 ntBASIC4.03□□□□□ -1.76
PDX1P52945 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
PDX1P52945 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.03□□□□□ -1.77
PDX1P52945 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.02□□□□□ -1.77
PDX1P52945 FAM91A3P-201ENST00000456826 2544 ntBASIC4.02□□□□□ -1.77
PDX1P52945 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC4.02□□□□□ -1.77
PDX1P52945 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
PDX1P52945 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
PDX1P52945 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.02□□□□□ -1.77
PDX1P52945 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
PDX1P52945 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
PDX1P52945 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
PDX1P52945 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC4.02□□□□□ -1.77
PDX1P52945 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
PDX1P52945 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
PDX1P52945 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC4.02□□□□□ -1.77
PDX1P52945 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.02□□□□□ -1.77
PDX1P52945 ERHP2-201ENST00000402323 299 ntBASIC4.02□□□□□ -1.77
PDX1P52945 AL512430.2-201ENST00000406786 339 ntBASIC4.02□□□□□ -1.77
PDX1P52945 AL139098.1-201ENST00000407291 389 ntBASIC4.02□□□□□ -1.77
PDX1P52945 HIGD1AP15-201ENST00000416198 280 ntBASIC4.02□□□□□ -1.77
PDX1P52945 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.02□□□□□ -1.77
PDX1P52945 XKRYP1-201ENST00000423438 492 ntBASIC4.02□□□□□ -1.77
PDX1P52945 ZDHHC20P2-201ENST00000424108 429 ntBASIC4.02□□□□□ -1.77
PDX1P52945 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC4.02□□□□□ -1.77
PDX1P52945 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 72.2 ms