Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 RNA5SP129-201ENST00000410276 118 ntBASIC3.23□□□□□ -1.89
GTF2A1P52655 ATG3P1-201ENST00000419507 911 ntBASIC3.23□□□□□ -1.89
GTF2A1P52655 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
GTF2A1P52655 CYCSP53-201ENST00000455540 265 ntBASIC3.23□□□□□ -1.89
GTF2A1P52655 AC022034.3-201ENST00000471393 478 ntBASIC3.23□□□□□ -1.89
GTF2A1P52655 RPL9P33-201ENST00000484311 566 ntBASIC3.23□□□□□ -1.89
GTF2A1P52655 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC3.23□□□□□ -1.89
GTF2A1P52655 SNORA31.9-201ENST00000516429 84 ntBASIC3.23□□□□□ -1.89
GTF2A1P52655 SCARNA14-201ENST00000516903 136 ntBASIC3.23□□□□□ -1.89
GTF2A1P52655 OR7E13P-201ENST00000526052 910 ntBASIC3.23□□□□□ -1.89
GTF2A1P52655 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC3.23□□□□□ -1.89
GTF2A1P52655 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC3.23□□□□□ -1.89
GTF2A1P52655 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.23□□□□□ -1.89
GTF2A1P52655 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC3.23□□□□□ -1.89
GTF2A1P52655 AC120057.2-201ENST00000571520 271 ntBASIC3.23□□□□□ -1.89
GTF2A1P52655 AP005901.4-201ENST00000577336 569 ntBASIC3.23□□□□□ -1.89
GTF2A1P52655 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.23□□□□□ -1.89
GTF2A1P52655 DUXAP4-201ENST00000603046 613 ntBASIC3.23□□□□□ -1.89
GTF2A1P52655 AC006077.1-201ENST00000604746 343 ntBASIC3.23□□□□□ -1.89
GTF2A1P52655 MIR6500-201ENST00000622700 86 ntBASIC3.23□□□□□ -1.89
GTF2A1P52655 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
GTF2A1P52655 AC090506.2-201ENST00000624521 419 ntBASIC3.23□□□□□ -1.89
GTF2A1P52655 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.23□□□□□ -1.89
GTF2A1P52655 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.23□□□□□ -1.89
GTF2A1P52655 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
GTF2A1P52655 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.23□□□□□ -1.89
GTF2A1P52655 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
GTF2A1P52655 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
GTF2A1P52655 AC017071.1-201ENST00000564407 2204 ntBASIC3.22□□□□□ -1.89
GTF2A1P52655 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
GTF2A1P52655 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
GTF2A1P52655 ST13P16-201ENST00000401760 781 ntBASIC3.22□□□□□ -1.89
GTF2A1P52655 RNU2-6P-201ENST00000411404 190 ntBASIC3.22□□□□□ -1.89
GTF2A1P52655 AC092638.1-201ENST00000411966 1275 ntBASIC3.22□□□□□ -1.89
GTF2A1P52655 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.22□□□□□ -1.89
GTF2A1P52655 RPL26P29-201ENST00000415623 438 ntBASIC3.22□□□□□ -1.89
GTF2A1P52655 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC3.22□□□□□ -1.89
GTF2A1P52655 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.22□□□□□ -1.89
GTF2A1P52655 CCNB1IP1P2-201ENST00000432876 818 ntBASIC3.22□□□□□ -1.89
GTF2A1P52655 RPL36AP6-201ENST00000435770 321 ntBASIC3.22□□□□□ -1.89
GTF2A1P52655 AC006994.1-201ENST00000438212 839 ntBASIC3.22□□□□□ -1.89
GTF2A1P52655 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.22□□□□□ -1.89
GTF2A1P52655 UBDP1-202ENST00000457888 382 ntBASIC3.22□□□□□ -1.89
GTF2A1P52655 AC010618.1-201ENST00000469924 477 ntBASIC3.22□□□□□ -1.89
GTF2A1P52655 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC3.22□□□□□ -1.89
GTF2A1P52655 RNA5SP164-201ENST00000516533 110 ntBASIC3.22□□□□□ -1.89
GTF2A1P52655 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC3.22□□□□□ -1.89
GTF2A1P52655 MRPL49P2-201ENST00000521066 465 ntBASIC3.22□□□□□ -1.89
GTF2A1P52655 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC3.22□□□□□ -1.89
GTF2A1P52655 AC011124.1-204ENST00000522265 562 ntTSL 4 BASIC3.22□□□□□ -1.89
GTF2A1P52655 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.22□□□□□ -1.89
GTF2A1P52655 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC3.22□□□□□ -1.89
GTF2A1P52655 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC3.22□□□□□ -1.89
GTF2A1P52655 AC004486.1-201ENST00000546846 233 ntBASIC3.22□□□□□ -1.89
GTF2A1P52655 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC3.22□□□□□ -1.89
GTF2A1P52655 AC079228.1-201ENST00000624774 1049 ntBASIC3.22□□□□□ -1.89
GTF2A1P52655 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.22□□□□□ -1.89
GTF2A1P52655 OR52H1-202ENST00000641796 1061 ntBASIC3.22□□□□□ -1.89
GTF2A1P52655 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
GTF2A1P52655 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
GTF2A1P52655 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
GTF2A1P52655 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC3.22□□□□□ -1.89
GTF2A1P52655 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC3.21□□□□□ -1.89
GTF2A1P52655 AC116096.1-201ENST00000566804 2314 ntBASIC3.21□□□□□ -1.89
GTF2A1P52655 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.21□□□□□ -1.9
GTF2A1P52655 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC3.21□□□□□ -1.9
GTF2A1P52655 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC3.21□□□□□ -1.9
GTF2A1P52655 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
GTF2A1P52655 RPS4XP9-201ENST00000405151 780 ntBASIC3.21□□□□□ -1.9
GTF2A1P52655 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC3.21□□□□□ -1.9
GTF2A1P52655 USP9YP36-201ENST00000424581 829 ntBASIC3.21□□□□□ -1.9
GTF2A1P52655 ETF1P3-201ENST00000430422 1160 ntBASIC3.21□□□□□ -1.9
GTF2A1P52655 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC3.21□□□□□ -1.9
GTF2A1P52655 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC3.21□□□□□ -1.9
GTF2A1P52655 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC3.21□□□□□ -1.9
GTF2A1P52655 AC007967.1-201ENST00000455422 1159 ntBASIC3.21□□□□□ -1.9
GTF2A1P52655 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC3.21□□□□□ -1.9
GTF2A1P52655 RPS29P22-201ENST00000472363 168 ntBASIC3.21□□□□□ -1.9
GTF2A1P52655 RPL23AP11-201ENST00000475260 469 ntBASIC3.21□□□□□ -1.9
GTF2A1P52655 SETP14-201ENST00000497538 873 ntBASIC3.21□□□□□ -1.9
GTF2A1P52655 AC231760.1-201ENST00000498002 260 ntBASIC3.21□□□□□ -1.9
GTF2A1P52655 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.21□□□□□ -1.9
GTF2A1P52655 MGST2-204ENST00000506797 634 ntTSL 2 BASIC3.21□□□□□ -1.9
GTF2A1P52655 AC025881.1-201ENST00000518851 512 ntBASIC3.21□□□□□ -1.9
GTF2A1P52655 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC3.21□□□□□ -1.9
GTF2A1P52655 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.21□□□□□ -1.9
GTF2A1P52655 ELOCP31-201ENST00000540463 467 ntBASIC3.21□□□□□ -1.9
GTF2A1P52655 AC051619.2-201ENST00000559063 397 ntBASIC3.21□□□□□ -1.9
GTF2A1P52655 AC105036.1-201ENST00000566222 271 ntBASIC3.21□□□□□ -1.9
GTF2A1P52655 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC3.21□□□□□ -1.9
GTF2A1P52655 AC023575.1-201ENST00000580510 358 ntBASIC3.21□□□□□ -1.9
GTF2A1P52655 MIR3939-201ENST00000582614 106 ntBASIC3.21□□□□□ -1.9
GTF2A1P52655 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.21□□□□□ -1.9
GTF2A1P52655 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
GTF2A1P52655 AC091057.2-201ENST00000602594 792 ntBASIC3.21□□□□□ -1.9
GTF2A1P52655 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
GTF2A1P52655 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.21□□□□□ -1.9
GTF2A1P52655 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
GTF2A1P52655 BANCR-201ENST00000624238 473 ntTSL 2 BASIC3.21□□□□□ -1.9
GTF2A1P52655 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms