Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC4.23□□□□□ -1.73
SOX2P48431 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC4.23□□□□□ -1.73
SOX2P48431 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC4.23□□□□□ -1.73
SOX2P48431 SSX6-203ENST00000509958 336 ntTSL 3 BASIC4.23□□□□□ -1.73
SOX2P48431 BX510359.5-201ENST00000515651 304 ntBASIC4.23□□□□□ -1.73
SOX2P48431 RNA5SP362-201ENST00000516048 118 ntBASIC4.23□□□□□ -1.73
SOX2P48431 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC4.23□□□□□ -1.73
SOX2P48431 AP002453.2-201ENST00000533503 320 ntBASIC4.23□□□□□ -1.73
SOX2P48431 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC4.23□□□□□ -1.73
SOX2P48431 SMARCE1P3-201ENST00000553649 1231 ntBASIC4.23□□□□□ -1.73
SOX2P48431 AC090888.3-201ENST00000558917 509 ntBASIC4.23□□□□□ -1.73
SOX2P48431 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC4.23□□□□□ -1.73
SOX2P48431 AC018552.3-201ENST00000567416 561 ntBASIC4.23□□□□□ -1.73
SOX2P48431 AC090312.1-201ENST00000580637 348 ntBASIC4.23□□□□□ -1.73
SOX2P48431 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.23□□□□□ -1.73
SOX2P48431 AC005771.1-201ENST00000585581 349 ntBASIC4.23□□□□□ -1.73
SOX2P48431 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.23□□□□□ -1.73
SOX2P48431 BNIP3P23-201ENST00000599655 511 ntBASIC4.23□□□□□ -1.73
SOX2P48431 AP003465.2-201ENST00000602571 373 ntBASIC4.23□□□□□ -1.73
SOX2P48431 AP000403.1-201ENST00000603349 851 ntBASIC4.23□□□□□ -1.73
SOX2P48431 AC093765.1-201ENST00000603758 881 ntBASIC4.23□□□□□ -1.73
SOX2P48431 AC005191.1-201ENST00000603950 358 ntBASIC4.23□□□□□ -1.73
SOX2P48431 PRELID3BP8-201ENST00000604148 295 ntBASIC4.23□□□□□ -1.73
SOX2P48431 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
SOX2P48431 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC4.23□□□□□ -1.73
SOX2P48431 AC027807.2-201ENST00000616099 408 ntBASIC4.23□□□□□ -1.73
SOX2P48431 MIR6861-201ENST00000618657 64 ntBASIC4.23□□□□□ -1.73
SOX2P48431 AL022401.1-201ENST00000619498 108 ntBASIC4.23□□□□□ -1.73
SOX2P48431 AL049536.1-201ENST00000625043 744 ntBASIC4.23□□□□□ -1.73
SOX2P48431 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.23□□□□□ -1.73
SOX2P48431 U6.101-201ENST00000637707 76 ntBASIC4.23□□□□□ -1.73
SOX2P48431 AC092447.7-201ENST00000422212 1621 ntBASIC4.23□□□□□ -1.73
SOX2P48431 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.23□□□□□ -1.73
SOX2P48431 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC4.23□□□□□ -1.73
SOX2P48431 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
SOX2P48431 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
SOX2P48431 TEX21P-201ENST00000447107 1476 ntBASIC4.23□□□□□ -1.73
SOX2P48431 AC083843.3-201ENST00000623679 2186 ntBASIC4.23□□□□□ -1.73
SOX2P48431 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
SOX2P48431 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC4.23□□□□□ -1.73
SOX2P48431 AC091046.3-201ENST00000631455 1574 ntBASIC4.23□□□□□ -1.73
SOX2P48431 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.22□□□□□ -1.73
SOX2P48431 AL136164.3-201ENST00000624429 3978 ntBASIC4.22□□□□□ -1.73
SOX2P48431 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
SOX2P48431 EED-206ENST00000527888 1422 ntTSL 2 BASIC4.22□□□□□ -1.73
SOX2P48431 AP002907.1-201ENST00000606361 1430 ntBASIC4.22□□□□□ -1.73
SOX2P48431 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
SOX2P48431 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
SOX2P48431 MAPK10-349ENST00000641767 3661 ntBASIC4.22□□□□□ -1.73
SOX2P48431 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
SOX2P48431 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC4.22□□□□□ -1.73
SOX2P48431 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
SOX2P48431 ANKRD62P1-201ENST00000434304 1623 ntBASIC4.22□□□□□ -1.73
SOX2P48431 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
SOX2P48431 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
SOX2P48431 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
SOX2P48431 AC011155.1-201ENST00000316512 456 ntBASIC4.22□□□□□ -1.73
SOX2P48431 RNA5SP183-201ENST00000362452 119 ntBASIC4.22□□□□□ -1.73
SOX2P48431 RNA5SP242-201ENST00000364171 118 ntBASIC4.22□□□□□ -1.73
SOX2P48431 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
SOX2P48431 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
SOX2P48431 RNU6-517P-201ENST00000384362 110 ntBASIC4.22□□□□□ -1.73
SOX2P48431 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
SOX2P48431 ZSCAN12P1-201ENST00000406489 419 ntBASIC4.22□□□□□ -1.73
SOX2P48431 MIR320C1-201ENST00000408566 88 ntBASIC4.22□□□□□ -1.73
SOX2P48431 RNU6ATAC21P-201ENST00000408656 126 ntBASIC4.22□□□□□ -1.73
SOX2P48431 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC4.22□□□□□ -1.73
SOX2P48431 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC4.22□□□□□ -1.73
SOX2P48431 UBE2V1P10-201ENST00000414685 269 ntBASIC4.22□□□□□ -1.73
SOX2P48431 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC4.22□□□□□ -1.73
SOX2P48431 AF186996.5-201ENST00000418098 904 ntBASIC4.22□□□□□ -1.73
SOX2P48431 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.22□□□□□ -1.73
SOX2P48431 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC4.22□□□□□ -1.73
SOX2P48431 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC4.22□□□□□ -1.73
SOX2P48431 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC4.22□□□□□ -1.73
SOX2P48431 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC4.22□□□□□ -1.73
SOX2P48431 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC4.22□□□□□ -1.73
SOX2P48431 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC4.22□□□□□ -1.73
SOX2P48431 AL357520.1-201ENST00000441557 453 ntBASIC4.22□□□□□ -1.73
SOX2P48431 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC4.22□□□□□ -1.73
SOX2P48431 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC4.22□□□□□ -1.73
SOX2P48431 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC4.22□□□□□ -1.73
SOX2P48431 ARPC3P5-201ENST00000448802 534 ntBASIC4.22□□□□□ -1.73
SOX2P48431 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC4.22□□□□□ -1.73
SOX2P48431 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC4.22□□□□□ -1.73
SOX2P48431 TRBV26-201ENST00000456572 344 ntBASIC4.22□□□□□ -1.73
SOX2P48431 TPT1P7-201ENST00000458300 517 ntBASIC4.22□□□□□ -1.73
SOX2P48431 AC023141.9-201ENST00000458734 412 ntBASIC4.22□□□□□ -1.73
SOX2P48431 RNU7-136P-201ENST00000458819 69 ntBASIC4.22□□□□□ -1.73
SOX2P48431 AC026410.2-201ENST00000460281 156 ntBASIC4.22□□□□□ -1.73
SOX2P48431 AC104763.1-201ENST00000475274 360 ntBASIC4.22□□□□□ -1.73
SOX2P48431 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
SOX2P48431 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC4.22□□□□□ -1.73
SOX2P48431 RN7SL244P-201ENST00000493405 297 ntBASIC4.22□□□□□ -1.73
SOX2P48431 AC106872.3-201ENST00000495104 446 ntBASIC4.22□□□□□ -1.73
SOX2P48431 AC108693.1-201ENST00000496068 432 ntBASIC4.22□□□□□ -1.73
SOX2P48431 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC4.22□□□□□ -1.73
SOX2P48431 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC4.22□□□□□ -1.73
SOX2P48431 BNIP3P41-201ENST00000503774 571 ntBASIC4.22□□□□□ -1.73
SOX2P48431 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 123 ms