Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 AL133383.2-201ENST00000622958 2336 ntBASIC3.67□□□□□ -1.82
TNFSF9P41273 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.67□□□□□ -1.82
TNFSF9P41273 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
TNFSF9P41273 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
TNFSF9P41273 RNA5SP267-201ENST00000364893 126 ntBASIC3.67□□□□□ -1.82
TNFSF9P41273 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC3.67□□□□□ -1.82
TNFSF9P41273 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC3.67□□□□□ -1.82
TNFSF9P41273 AL031736.2-201ENST00000426573 787 ntBASIC3.67□□□□□ -1.82
TNFSF9P41273 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC3.67□□□□□ -1.82
TNFSF9P41273 AL158071.1-201ENST00000430315 461 ntBASIC3.67□□□□□ -1.82
TNFSF9P41273 AC005019.1-201ENST00000436455 431 ntBASIC3.67□□□□□ -1.82
TNFSF9P41273 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC3.67□□□□□ -1.82
TNFSF9P41273 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC3.67□□□□□ -1.82
TNFSF9P41273 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC3.67□□□□□ -1.82
TNFSF9P41273 BX510359.1-201ENST00000456973 237 ntBASIC3.67□□□□□ -1.82
TNFSF9P41273 RPS4XP2-201ENST00000458402 793 ntBASIC3.67□□□□□ -1.82
TNFSF9P41273 RPL21P13-201ENST00000488305 481 ntBASIC3.67□□□□□ -1.82
TNFSF9P41273 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC3.67□□□□□ -1.82
TNFSF9P41273 PRELID3BP7-201ENST00000503606 469 ntBASIC3.67□□□□□ -1.82
TNFSF9P41273 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
TNFSF9P41273 OR5H4P-201ENST00000510851 923 ntBASIC3.67□□□□□ -1.82
TNFSF9P41273 SNORA70.19-201ENST00000516717 90 ntBASIC3.67□□□□□ -1.82
TNFSF9P41273 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC3.67□□□□□ -1.82
TNFSF9P41273 HMGB1P46-201ENST00000520062 610 ntBASIC3.67□□□□□ -1.82
TNFSF9P41273 OR4A2P-201ENST00000527276 913 ntBASIC3.67□□□□□ -1.82
TNFSF9P41273 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.67□□□□□ -1.82
TNFSF9P41273 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC3.67□□□□□ -1.82
TNFSF9P41273 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC3.67□□□□□ -1.82
TNFSF9P41273 AC011611.1-201ENST00000552179 197 ntBASIC3.67□□□□□ -1.82
TNFSF9P41273 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC3.67□□□□□ -1.82
TNFSF9P41273 PCNAP1-202ENST00000595299 752 ntBASIC3.67□□□□□ -1.82
TNFSF9P41273 AL354976.1-201ENST00000613843 387 ntBASIC3.67□□□□□ -1.82
TNFSF9P41273 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC3.67□□□□□ -1.82
TNFSF9P41273 ALG13-230ENST00000623189 458 ntTSL 3 BASIC3.67□□□□□ -1.82
TNFSF9P41273 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC3.67□□□□□ -1.82
TNFSF9P41273 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.67□□□□□ -1.82
TNFSF9P41273 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
TNFSF9P41273 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC3.67□□□□□ -1.82
TNFSF9P41273 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
TNFSF9P41273 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC3.66□□□□□ -1.82
TNFSF9P41273 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
TNFSF9P41273 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
TNFSF9P41273 RN7SKP44-201ENST00000363602 316 ntBASIC3.66□□□□□ -1.82
TNFSF9P41273 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
TNFSF9P41273 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
TNFSF9P41273 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
TNFSF9P41273 OR1AA1P-201ENST00000419597 916 ntBASIC3.66□□□□□ -1.82
TNFSF9P41273 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC3.66□□□□□ -1.82
TNFSF9P41273 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC3.66□□□□□ -1.82
TNFSF9P41273 TPTE2P6-202ENST00000445572 1007 ntBASIC3.66□□□□□ -1.82
TNFSF9P41273 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
TNFSF9P41273 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
TNFSF9P41273 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.66□□□□□ -1.82
TNFSF9P41273 AC097262.1-201ENST00000452559 548 ntBASIC3.66□□□□□ -1.82
TNFSF9P41273 AL645939.1-201ENST00000453429 797 ntBASIC3.66□□□□□ -1.82
TNFSF9P41273 AC133473.1-201ENST00000455173 299 ntBASIC3.66□□□□□ -1.82
TNFSF9P41273 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.66□□□□□ -1.82
TNFSF9P41273 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC3.66□□□□□ -1.82
TNFSF9P41273 AC021678.1-201ENST00000505195 936 ntBASIC3.66□□□□□ -1.82
TNFSF9P41273 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC3.66□□□□□ -1.82
TNFSF9P41273 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.66□□□□□ -1.82
TNFSF9P41273 MIR2114-201ENST00000516645 80 ntBASIC3.66□□□□□ -1.82
TNFSF9P41273 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
TNFSF9P41273 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC3.66□□□□□ -1.82
TNFSF9P41273 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC3.66□□□□□ -1.82
TNFSF9P41273 MTND4LP24-201ENST00000572277 291 ntBASIC3.66□□□□□ -1.82
TNFSF9P41273 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC3.66□□□□□ -1.82
TNFSF9P41273 MIR4276-201ENST00000584832 70 ntBASIC3.66□□□□□ -1.82
TNFSF9P41273 AL031985.2-201ENST00000600955 480 ntBASIC3.66□□□□□ -1.82
TNFSF9P41273 MTCO3P22-201ENST00000603219 784 ntBASIC3.66□□□□□ -1.82
TNFSF9P41273 AL160281.1-201ENST00000605307 311 ntBASIC3.66□□□□□ -1.82
TNFSF9P41273 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.66□□□□□ -1.82
TNFSF9P41273 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.66□□□□□ -1.82
TNFSF9P41273 AC110792.4-201ENST00000609843 298 ntBASIC3.66□□□□□ -1.82
TNFSF9P41273 MIR8058-201ENST00000615737 89 ntBASIC3.66□□□□□ -1.82
TNFSF9P41273 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC3.66□□□□□ -1.82
TNFSF9P41273 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
TNFSF9P41273 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.66□□□□□ -1.82
TNFSF9P41273 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.66□□□□□ -1.82
TNFSF9P41273 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
TNFSF9P41273 STK31-205ENST00000433467 3085 ntTSL 2 BASIC3.66□□□□□ -1.82
TNFSF9P41273 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
TNFSF9P41273 AC134882.1-201ENST00000603738 1676 ntBASIC3.65□□□□□ -1.82
TNFSF9P41273 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.82
TNFSF9P41273 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.82
TNFSF9P41273 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.82
TNFSF9P41273 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
TNFSF9P41273 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
TNFSF9P41273 MIR124-3-201ENST00000384866 87 ntBASIC3.65□□□□□ -1.83
TNFSF9P41273 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
TNFSF9P41273 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC3.65□□□□□ -1.83
TNFSF9P41273 AL158156.1-201ENST00000422509 473 ntBASIC3.65□□□□□ -1.83
TNFSF9P41273 RPS12P5-201ENST00000423449 371 ntBASIC3.65□□□□□ -1.83
TNFSF9P41273 AC091390.3-201ENST00000426478 338 ntBASIC3.65□□□□□ -1.83
TNFSF9P41273 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.65□□□□□ -1.83
TNFSF9P41273 AC005326.1-201ENST00000429197 123 ntBASIC3.65□□□□□ -1.83
TNFSF9P41273 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC3.65□□□□□ -1.83
TNFSF9P41273 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC3.65□□□□□ -1.83
TNFSF9P41273 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
TNFSF9P41273 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 147 ms