Protein–RNA interactions for Protein: P31271

HOXA13, Homeobox protein Hox-A13, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA13P31271 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.47□□□□□ -1.69
HOXA13P31271 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
HOXA13P31271 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
HOXA13P31271 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
HOXA13P31271 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
HOXA13P31271 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC4.47□□□□□ -1.69
HOXA13P31271 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
HOXA13P31271 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC4.47□□□□□ -1.69
HOXA13P31271 AL359837.1-201ENST00000381357 287 ntBASIC4.47□□□□□ -1.69
HOXA13P31271 SNORA48.7-201ENST00000391302 135 ntBASIC4.47□□□□□ -1.69
HOXA13P31271 SNORA3C-201ENST00000408792 125 ntBASIC4.47□□□□□ -1.69
HOXA13P31271 RNA5SP146-201ENST00000410743 123 ntBASIC4.47□□□□□ -1.69
HOXA13P31271 RNU6-575P-201ENST00000411326 105 ntBASIC4.47□□□□□ -1.69
HOXA13P31271 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC4.47□□□□□ -1.69
HOXA13P31271 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC4.47□□□□□ -1.69
HOXA13P31271 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC4.47□□□□□ -1.69
HOXA13P31271 NANOGP5-201ENST00000424456 877 ntBASIC4.47□□□□□ -1.69
HOXA13P31271 RAC1P8-201ENST00000427086 527 ntBASIC4.47□□□□□ -1.69
HOXA13P31271 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.47□□□□□ -1.69
HOXA13P31271 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC4.47□□□□□ -1.69
HOXA13P31271 AC023347.2-201ENST00000433994 462 ntBASIC4.47□□□□□ -1.69
HOXA13P31271 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.47□□□□□ -1.69
HOXA13P31271 AC069285.2-201ENST00000440210 275 ntBASIC4.47□□□□□ -1.69
HOXA13P31271 HMGB3P6-201ENST00000444896 598 ntBASIC4.47□□□□□ -1.69
HOXA13P31271 RPL7P59-201ENST00000447700 943 ntBASIC4.47□□□□□ -1.69
HOXA13P31271 IFNWP4-201ENST00000453148 294 ntBASIC4.47□□□□□ -1.69
HOXA13P31271 MRPL42P4-201ENST00000453267 443 ntBASIC4.47□□□□□ -1.69
HOXA13P31271 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC4.47□□□□□ -1.69
HOXA13P31271 AC092155.2-201ENST00000454675 477 ntBASIC4.47□□□□□ -1.69
HOXA13P31271 RN7SL271P-201ENST00000487601 295 ntBASIC4.47□□□□□ -1.69
HOXA13P31271 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC4.47□□□□□ -1.69
HOXA13P31271 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC4.47□□□□□ -1.69
HOXA13P31271 AC110792.2-201ENST00000510278 224 ntBASIC4.47□□□□□ -1.69
HOXA13P31271 SCARNA14-201ENST00000516903 136 ntBASIC4.47□□□□□ -1.69
HOXA13P31271 AC022790.1-201ENST00000522872 204 ntBASIC4.47□□□□□ -1.69
HOXA13P31271 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC4.47□□□□□ -1.69
HOXA13P31271 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC4.47□□□□□ -1.69
HOXA13P31271 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC4.47□□□□□ -1.69
HOXA13P31271 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC4.47□□□□□ -1.69
HOXA13P31271 AGGF1P5-201ENST00000567900 919 ntBASIC4.47□□□□□ -1.69
HOXA13P31271 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC4.47□□□□□ -1.69
HOXA13P31271 RPP40P2-201ENST00000603596 712 ntBASIC4.47□□□□□ -1.69
HOXA13P31271 AL392112.1-201ENST00000605115 829 ntBASIC4.47□□□□□ -1.69
HOXA13P31271 AC012603.1-201ENST00000606424 528 ntBASIC4.47□□□□□ -1.69
HOXA13P31271 RNU4-5P-201ENST00000607255 135 ntBASIC4.47□□□□□ -1.69
HOXA13P31271 AP004247.3-201ENST00000608682 624 ntBASIC4.47□□□□□ -1.69
HOXA13P31271 AP005137.2-201ENST00000609238 400 ntBASIC4.47□□□□□ -1.69
HOXA13P31271 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC4.47□□□□□ -1.69
HOXA13P31271 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.47□□□□□ -1.69
HOXA13P31271 AP000770.2-201ENST00000623694 100 ntBASIC4.47□□□□□ -1.69
HOXA13P31271 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC4.47□□□□□ -1.69
HOXA13P31271 AC087821.2-201ENST00000637086 450 ntBASIC4.47□□□□□ -1.69
HOXA13P31271 AC011266.1-201ENST00000624119 3569 ntBASIC4.47□□□□□ -1.69
HOXA13P31271 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.47□□□□□ -1.69
HOXA13P31271 AC000367.1-201ENST00000452711 1766 ntBASIC4.47□□□□□ -1.69
HOXA13P31271 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
HOXA13P31271 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
HOXA13P31271 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
HOXA13P31271 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
HOXA13P31271 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
HOXA13P31271 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
HOXA13P31271 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.46□□□□□ -1.69
HOXA13P31271 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
HOXA13P31271 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC4.46□□□□□ -1.69
HOXA13P31271 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.46□□□□□ -1.7
HOXA13P31271 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.46□□□□□ -1.7
HOXA13P31271 XPOTP1-201ENST00000443317 2398 ntBASIC4.46□□□□□ -1.7
HOXA13P31271 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.46□□□□□ -1.7
HOXA13P31271 RNA5SP124-201ENST00000362739 110 ntBASIC4.46□□□□□ -1.7
HOXA13P31271 RNA5SP97-201ENST00000365006 84 ntBASIC4.46□□□□□ -1.7
HOXA13P31271 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC4.46□□□□□ -1.7
HOXA13P31271 RNU6-1151P-201ENST00000384684 107 ntBASIC4.46□□□□□ -1.7
HOXA13P31271 MTCO1P56-201ENST00000401674 224 ntBASIC4.46□□□□□ -1.7
HOXA13P31271 AL590704.1-201ENST00000402856 794 ntBASIC4.46□□□□□ -1.7
HOXA13P31271 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC4.46□□□□□ -1.7
HOXA13P31271 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
HOXA13P31271 IPMKP1-201ENST00000425988 855 ntBASIC4.46□□□□□ -1.7
HOXA13P31271 USP9YP24-201ENST00000434374 697 ntBASIC4.46□□□□□ -1.7
HOXA13P31271 AC083863.1-201ENST00000438811 231 ntBASIC4.46□□□□□ -1.7
HOXA13P31271 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC4.46□□□□□ -1.7
HOXA13P31271 USP9YP17-201ENST00000444617 696 ntBASIC4.46□□□□□ -1.7
HOXA13P31271 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC4.46□□□□□ -1.7
HOXA13P31271 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC4.46□□□□□ -1.7
HOXA13P31271 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC4.46□□□□□ -1.7
HOXA13P31271 AL500522.2-201ENST00000448562 343 ntBASIC4.46□□□□□ -1.7
HOXA13P31271 RPS6P2-201ENST00000454208 705 ntBASIC4.46□□□□□ -1.7
HOXA13P31271 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC4.46□□□□□ -1.7
HOXA13P31271 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC4.46□□□□□ -1.7
HOXA13P31271 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC4.46□□□□□ -1.7
HOXA13P31271 SNORA67.7-201ENST00000516664 135 ntBASIC4.46□□□□□ -1.7
HOXA13P31271 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC4.46□□□□□ -1.7
HOXA13P31271 AC026407.1-201ENST00000518369 204 ntBASIC4.46□□□□□ -1.7
HOXA13P31271 MTND2P32-201ENST00000521584 1038 ntBASIC4.46□□□□□ -1.7
HOXA13P31271 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC4.46□□□□□ -1.7
HOXA13P31271 AP001207.1-201ENST00000524051 481 ntBASIC4.46□□□□□ -1.7
HOXA13P31271 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC4.46□□□□□ -1.7
HOXA13P31271 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC4.46□□□□□ -1.7
HOXA13P31271 AC092747.2-201ENST00000545069 983 ntBASIC4.46□□□□□ -1.7
HOXA13P31271 MTATP6P24-201ENST00000576835 677 ntBASIC4.46□□□□□ -1.7
HOXA13P31271 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms