Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC4.86□□□□□ -1.63
CLIP1P30622 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC4.86□□□□□ -1.63
CLIP1P30622 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC4.86□□□□□ -1.63
CLIP1P30622 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC4.86□□□□□ -1.63
CLIP1P30622 AC091826.1-201ENST00000514065 313 ntBASIC4.86□□□□□ -1.63
CLIP1P30622 RNA5SP356-201ENST00000515972 94 ntBASIC4.86□□□□□ -1.63
CLIP1P30622 AC009812.2-201ENST00000517657 457 ntBASIC4.86□□□□□ -1.63
CLIP1P30622 RPL12P50-201ENST00000603116 116 ntBASIC4.86□□□□□ -1.63
CLIP1P30622 AL590240.3-201ENST00000621416 943 ntBASIC4.86□□□□□ -1.63
CLIP1P30622 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
CLIP1P30622 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC4.86□□□□□ -1.63
CLIP1P30622 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
CLIP1P30622 MTND4P10-201ENST00000446199 1363 ntBASIC4.85□□□□□ -1.63
CLIP1P30622 AP003122.5-201ENST00000527668 3766 ntBASIC4.85□□□□□ -1.63
CLIP1P30622 SNORA71.1-201ENST00000364523 117 ntBASIC4.85□□□□□ -1.63
CLIP1P30622 RNU6-729P-201ENST00000384399 107 ntBASIC4.85□□□□□ -1.63
CLIP1P30622 RN7SKP285-201ENST00000410137 318 ntBASIC4.85□□□□□ -1.63
CLIP1P30622 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.85□□□□□ -1.63
CLIP1P30622 SETP5-201ENST00000437270 562 ntBASIC4.85□□□□□ -1.63
CLIP1P30622 RN7SL20P-201ENST00000488827 297 ntBASIC4.85□□□□□ -1.63
CLIP1P30622 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC4.85□□□□□ -1.63
CLIP1P30622 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC4.85□□□□□ -1.63
CLIP1P30622 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC4.85□□□□□ -1.63
CLIP1P30622 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC4.85□□□□□ -1.63
CLIP1P30622 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CLIP1P30622 PWAR6-201ENST00000552334 4618 ntBASIC4.85□□□□□ -1.63
CLIP1P30622 AL451142.2-201ENST00000429076 2090 ntBASIC4.85□□□□□ -1.63
CLIP1P30622 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
CLIP1P30622 AL645568.2-201ENST00000432815 1337 ntBASIC4.85□□□□□ -1.63
CLIP1P30622 PROS2P-201ENST00000474651 1951 ntBASIC4.85□□□□□ -1.63
CLIP1P30622 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CLIP1P30622 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CLIP1P30622 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC4.84□□□□□ -1.63
CLIP1P30622 TOPORSLP1-201ENST00000467693 2102 ntBASIC4.84□□□□□ -1.63
CLIP1P30622 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.63
CLIP1P30622 SNORD56.3-201ENST00000363507 71 ntBASIC4.84□□□□□ -1.63
CLIP1P30622 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
CLIP1P30622 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
CLIP1P30622 AMD1P2-201ENST00000412936 992 ntBASIC4.84□□□□□ -1.63
CLIP1P30622 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC4.84□□□□□ -1.63
CLIP1P30622 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
CLIP1P30622 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC4.84□□□□□ -1.63
CLIP1P30622 OR2A20P-203ENST00000498397 1268 ntBASIC4.84□□□□□ -1.63
CLIP1P30622 RNA5SP217-201ENST00000515959 91 ntBASIC4.84□□□□□ -1.63
CLIP1P30622 AP005205.1-201ENST00000563503 508 ntBASIC4.84□□□□□ -1.63
CLIP1P30622 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC4.84□□□□□ -1.63
CLIP1P30622 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC4.84□□□□□ -1.63
CLIP1P30622 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC4.84□□□□□ -1.63
CLIP1P30622 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC4.84□□□□□ -1.63
CLIP1P30622 AC018529.3-201ENST00000624212 2254 ntBASIC4.84□□□□□ -1.63
CLIP1P30622 AC026523.2-201ENST00000625039 7739 ntBASIC4.84□□□□□ -1.63
CLIP1P30622 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
CLIP1P30622 AC000403.1-201ENST00000613696 3585 ntBASIC4.83□□□□□ -1.64
CLIP1P30622 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CLIP1P30622 AL513175.1-201ENST00000431492 780 ntBASIC4.83□□□□□ -1.64
CLIP1P30622 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC4.83□□□□□ -1.64
CLIP1P30622 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC4.83□□□□□ -1.64
CLIP1P30622 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC4.83□□□□□ -1.64
CLIP1P30622 CYCSP20-201ENST00000473154 315 ntBASIC4.83□□□□□ -1.64
CLIP1P30622 ST13P14-201ENST00000474095 734 ntBASIC4.83□□□□□ -1.64
CLIP1P30622 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC4.83□□□□□ -1.64
CLIP1P30622 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC4.83□□□□□ -1.64
CLIP1P30622 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.83□□□□□ -1.64
CLIP1P30622 AC139713.2-210ENST00000641741 992 ntBASIC4.83□□□□□ -1.64
CLIP1P30622 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC4.83□□□□□ -1.64
CLIP1P30622 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC4.83□□□□□ -1.64
CLIP1P30622 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CLIP1P30622 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CLIP1P30622 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.82□□□□□ -1.64
CLIP1P30622 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
CLIP1P30622 AC110754.1-201ENST00000399740 601 ntBASIC4.82□□□□□ -1.64
CLIP1P30622 NACAP7-201ENST00000407371 609 ntBASIC4.82□□□□□ -1.64
CLIP1P30622 AC006960.1-201ENST00000419980 153 ntBASIC4.82□□□□□ -1.64
CLIP1P30622 AL136097.1-201ENST00000456945 913 ntBASIC4.82□□□□□ -1.64
CLIP1P30622 AC004924.1-201ENST00000480160 781 ntBASIC4.82□□□□□ -1.64
CLIP1P30622 RPS4XP22-201ENST00000480755 780 ntBASIC4.82□□□□□ -1.64
CLIP1P30622 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC4.82□□□□□ -1.64
CLIP1P30622 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC4.82□□□□□ -1.64
CLIP1P30622 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC4.82□□□□□ -1.64
CLIP1P30622 AC012020.1-201ENST00000624541 1728 ntBASIC4.82□□□□□ -1.64
CLIP1P30622 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
CLIP1P30622 AL049555.1-201ENST00000562834 1933 ntBASIC4.82□□□□□ -1.64
CLIP1P30622 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
CLIP1P30622 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC4.82□□□□□ -1.64
CLIP1P30622 AC012078.1-201ENST00000405035 1646 ntBASIC4.82□□□□□ -1.64
CLIP1P30622 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
CLIP1P30622 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC4.82□□□□□ -1.64
CLIP1P30622 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CLIP1P30622 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC4.81□□□□□ -1.64
CLIP1P30622 RNA5SP80-201ENST00000410475 111 ntBASIC4.81□□□□□ -1.64
CLIP1P30622 VN1R51P-201ENST00000411675 945 ntBASIC4.81□□□□□ -1.64
CLIP1P30622 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC4.81□□□□□ -1.64
CLIP1P30622 TRBV24OR9-2-201ENST00000416632 435 ntBASIC4.81□□□□□ -1.64
CLIP1P30622 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC4.81□□□□□ -1.64
CLIP1P30622 RPS12P5-201ENST00000423449 371 ntBASIC4.81□□□□□ -1.64
CLIP1P30622 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC4.81□□□□□ -1.64
CLIP1P30622 AC008121.2-201ENST00000614647 523 ntBASIC4.81□□□□□ -1.64
CLIP1P30622 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.81□□□□□ -1.64
CLIP1P30622 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.81□□□□□ -1.64
CLIP1P30622 ELL2P4-201ENST00000446870 1376 ntBASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms