Protein–RNA interactions for Protein: P28068

HLA-DMB, HLA class II histocompatibility antigen, DM beta chain, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMBP28068 AL133162.1-201ENST00000463228 453 ntBASIC2.7□□□□□ -1.98
HLA-DMBP28068 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC2.7□□□□□ -1.98
HLA-DMBP28068 ACTG1P13-201ENST00000486987 1043 ntBASIC2.7□□□□□ -1.98
HLA-DMBP28068 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC2.7□□□□□ -1.98
HLA-DMBP28068 RPL23AP73-201ENST00000492507 471 ntBASIC2.7□□□□□ -1.98
HLA-DMBP28068 ACTR3BP4-201ENST00000503033 1244 ntBASIC2.7□□□□□ -1.98
HLA-DMBP28068 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC2.7□□□□□ -1.98
HLA-DMBP28068 PCBP2P3-201ENST00000509726 843 ntBASIC2.7□□□□□ -1.98
HLA-DMBP28068 AC010285.3-201ENST00000511668 676 ntBASIC2.7□□□□□ -1.98
HLA-DMBP28068 RFESD-208ENST00000513950 464 ntTSL 5 BASIC2.7□□□□□ -1.98
HLA-DMBP28068 RNU1-95P-201ENST00000516357 160 ntBASIC2.7□□□□□ -1.98
HLA-DMBP28068 RNU2-58P-201ENST00000516403 183 ntBASIC2.7□□□□□ -1.98
HLA-DMBP28068 RNU4ATAC15P-201ENST00000516415 126 ntBASIC2.7□□□□□ -1.98
HLA-DMBP28068 RNU1-128P-201ENST00000516704 160 ntBASIC2.7□□□□□ -1.98
HLA-DMBP28068 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC2.7□□□□□ -1.98
HLA-DMBP28068 AP006245.1-201ENST00000522549 120 ntBASIC2.7□□□□□ -1.98
HLA-DMBP28068 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC2.7□□□□□ -1.98
HLA-DMBP28068 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC2.7□□□□□ -1.98
HLA-DMBP28068 MTND4LP24-201ENST00000572277 291 ntBASIC2.7□□□□□ -1.98
HLA-DMBP28068 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC2.7□□□□□ -1.98
HLA-DMBP28068 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC2.7□□□□□ -1.98
HLA-DMBP28068 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC2.7□□□□□ -1.98
HLA-DMBP28068 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC2.7□□□□□ -1.98
HLA-DMBP28068 LLPHP1-201ENST00000603571 367 ntBASIC2.7□□□□□ -1.98
HLA-DMBP28068 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC2.7□□□□□ -1.98
HLA-DMBP28068 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
HLA-DMBP28068 MIR6075-201ENST00000620782 95 ntBASIC2.7□□□□□ -1.98
HLA-DMBP28068 AC022149.2-201ENST00000621061 203 ntBASIC2.7□□□□□ -1.98
HLA-DMBP28068 AC018816.2-201ENST00000621460 353 ntBASIC2.7□□□□□ -1.98
HLA-DMBP28068 AC006065.5-201ENST00000623427 349 ntBASIC2.7□□□□□ -1.98
HLA-DMBP28068 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC2.7□□□□□ -1.98
HLA-DMBP28068 AL133383.2-201ENST00000622958 2336 ntBASIC2.7□□□□□ -1.98
HLA-DMBP28068 AC119744.1-201ENST00000454746 1715 ntBASIC2.7□□□□□ -1.98
HLA-DMBP28068 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC2.7□□□□□ -1.98
HLA-DMBP28068 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
HLA-DMBP28068 AC007823.1-201ENST00000569932 1566 ntBASIC2.7□□□□□ -1.98
HLA-DMBP28068 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC2.69□□□□□ -1.98
HLA-DMBP28068 AC021755.1-201ENST00000559747 1447 ntBASIC2.69□□□□□ -1.98
HLA-DMBP28068 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
HLA-DMBP28068 AC005183.1-201ENST00000603687 1979 ntBASIC2.69□□□□□ -1.98
HLA-DMBP28068 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
HLA-DMBP28068 SNORA5A-201ENST00000384111 134 ntBASIC2.69□□□□□ -1.98
HLA-DMBP28068 RNU6-31P-201ENST00000384388 108 ntBASIC2.69□□□□□ -1.98
HLA-DMBP28068 MIR153-1-201ENST00000384914 90 ntBASIC2.69□□□□□ -1.98
HLA-DMBP28068 MIR449B-201ENST00000384995 97 ntBASIC2.69□□□□□ -1.98
HLA-DMBP28068 RNU2-37P-201ENST00000410695 177 ntBASIC2.69□□□□□ -1.98
HLA-DMBP28068 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC2.69□□□□□ -1.98
HLA-DMBP28068 AC017079.2-201ENST00000416102 485 ntBASIC2.69□□□□□ -1.98
HLA-DMBP28068 AL050321.1-201ENST00000432363 400 ntBASIC2.69□□□□□ -1.98
HLA-DMBP28068 MED6P1-201ENST00000439659 713 ntBASIC2.69□□□□□ -1.98
HLA-DMBP28068 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC2.69□□□□□ -1.98
HLA-DMBP28068 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC2.69□□□□□ -1.98
HLA-DMBP28068 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC2.69□□□□□ -1.98
HLA-DMBP28068 AL358232.1-201ENST00000448030 501 ntBASIC2.69□□□□□ -1.98
HLA-DMBP28068 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC2.69□□□□□ -1.98
HLA-DMBP28068 PPIAP3-201ENST00000450588 505 ntBASIC2.69□□□□□ -1.98
HLA-DMBP28068 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC2.69□□□□□ -1.98
HLA-DMBP28068 RPL37P6-202ENST00000464216 403 ntBASIC2.69□□□□□ -1.98
HLA-DMBP28068 RPS4XP22-201ENST00000480755 780 ntBASIC2.69□□□□□ -1.98
HLA-DMBP28068 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC2.69□□□□□ -1.98
HLA-DMBP28068 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC2.69□□□□□ -1.98
HLA-DMBP28068 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC2.69□□□□□ -1.98
HLA-DMBP28068 RN7SKP157-201ENST00000516174 282 ntBASIC2.69□□□□□ -1.98
HLA-DMBP28068 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC2.69□□□□□ -1.98
HLA-DMBP28068 IGHV3-76-201ENST00000522465 295 ntBASIC2.69□□□□□ -1.98
HLA-DMBP28068 OR8I1P-201ENST00000529291 931 ntBASIC2.69□□□□□ -1.98
HLA-DMBP28068 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC2.69□□□□□ -1.98
HLA-DMBP28068 AC092868.3-201ENST00000560515 784 ntBASIC2.69□□□□□ -1.98
HLA-DMBP28068 ZNF192P1-203ENST00000565888 810 ntBASIC2.69□□□□□ -1.98
HLA-DMBP28068 AC053481.3-201ENST00000577881 843 ntBASIC2.69□□□□□ -1.98
HLA-DMBP28068 MIR4444-1-201ENST00000581696 74 ntBASIC2.69□□□□□ -1.98
HLA-DMBP28068 MIR5187-201ENST00000583479 76 ntBASIC2.69□□□□□ -1.98
HLA-DMBP28068 MIR4444-2-201ENST00000584390 74 ntBASIC2.69□□□□□ -1.98
HLA-DMBP28068 AC115085.1-201ENST00000588924 229 ntBASIC2.69□□□□□ -1.98
HLA-DMBP28068 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
HLA-DMBP28068 U4.6-201ENST00000621618 127 ntBASIC2.69□□□□□ -1.98
HLA-DMBP28068 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC2.69□□□□□ -1.98
HLA-DMBP28068 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
HLA-DMBP28068 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
HLA-DMBP28068 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
HLA-DMBP28068 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC2.69□□□□□ -1.98
HLA-DMBP28068 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
HLA-DMBP28068 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
HLA-DMBP28068 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC2.68□□□□□ -1.98
HLA-DMBP28068 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC2.68□□□□□ -1.98
HLA-DMBP28068 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
HLA-DMBP28068 AL161912.2-201ENST00000565707 3007 ntBASIC2.68□□□□□ -1.98
HLA-DMBP28068 MIR30E-201ENST00000362104 92 ntBASIC2.68□□□□□ -1.98
HLA-DMBP28068 5S_rRNA.1-201ENST00000364415 116 ntBASIC2.68□□□□□ -1.98
HLA-DMBP28068 SNORA73.2-201ENST00000364946 201 ntBASIC2.68□□□□□ -1.98
HLA-DMBP28068 U3.39-201ENST00000408569 239 ntBASIC2.68□□□□□ -1.98
HLA-DMBP28068 LINC01881-201ENST00000416103 412 ntBASIC2.68□□□□□ -1.98
HLA-DMBP28068 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC2.68□□□□□ -1.98
HLA-DMBP28068 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC2.68□□□□□ -1.98
HLA-DMBP28068 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC2.68□□□□□ -1.98
HLA-DMBP28068 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
HLA-DMBP28068 AJ239321.1-201ENST00000424255 564 ntBASIC2.68□□□□□ -1.98
HLA-DMBP28068 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC2.68□□□□□ -1.98
HLA-DMBP28068 RPL37P1-201ENST00000432310 284 ntBASIC2.68□□□□□ -1.98
HLA-DMBP28068 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 125.7 ms