Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC4.14□□□□□ -1.75
PTPN3P26045 HIGD1AP5-201ENST00000529959 259 ntBASIC4.14□□□□□ -1.75
PTPN3P26045 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC4.14□□□□□ -1.75
PTPN3P26045 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC4.14□□□□□ -1.75
PTPN3P26045 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.14□□□□□ -1.75
PTPN3P26045 AL132857.1-201ENST00000555180 708 ntBASIC4.14□□□□□ -1.75
PTPN3P26045 AC044913.1-201ENST00000557200 430 ntBASIC4.14□□□□□ -1.75
PTPN3P26045 AC022968.1-201ENST00000567372 442 ntBASIC4.14□□□□□ -1.75
PTPN3P26045 AC025627.2-201ENST00000576220 160 ntBASIC4.14□□□□□ -1.75
PTPN3P26045 MIR3939-201ENST00000582614 106 ntBASIC4.14□□□□□ -1.75
PTPN3P26045 AC069366.1-201ENST00000583159 838 ntBASIC4.14□□□□□ -1.75
PTPN3P26045 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.14□□□□□ -1.75
PTPN3P26045 AL035411.2-201ENST00000604022 421 ntBASIC4.14□□□□□ -1.75
PTPN3P26045 RNU4-5P-201ENST00000607255 135 ntBASIC4.14□□□□□ -1.75
PTPN3P26045 AC099676.1-201ENST00000608886 657 ntBASIC4.14□□□□□ -1.75
PTPN3P26045 AL157392.4-201ENST00000609756 345 ntBASIC4.14□□□□□ -1.75
PTPN3P26045 AC005962.2-201ENST00000611427 652 ntBASIC4.14□□□□□ -1.75
PTPN3P26045 MLECP1-201ENST00000615893 709 ntBASIC4.14□□□□□ -1.75
PTPN3P26045 AC010608.2-201ENST00000624830 470 ntBASIC4.14□□□□□ -1.75
PTPN3P26045 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
PTPN3P26045 OR52H1-202ENST00000641796 1061 ntBASIC4.14□□□□□ -1.75
PTPN3P26045 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.14□□□□□ -1.75
PTPN3P26045 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
PTPN3P26045 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.14□□□□□ -1.75
PTPN3P26045 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.14□□□□□ -1.75
PTPN3P26045 MTCO1P14-201ENST00000441695 1559 ntBASIC4.14□□□□□ -1.75
PTPN3P26045 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC4.14□□□□□ -1.75
PTPN3P26045 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
PTPN3P26045 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.13□□□□□ -1.75
PTPN3P26045 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.13□□□□□ -1.75
PTPN3P26045 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
PTPN3P26045 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.13□□□□□ -1.75
PTPN3P26045 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
PTPN3P26045 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC4.13□□□□□ -1.75
PTPN3P26045 SNORA60-201ENST00000362396 134 ntBASIC4.13□□□□□ -1.75
PTPN3P26045 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC4.13□□□□□ -1.75
PTPN3P26045 RNU6-224P-201ENST00000384055 107 ntBASIC4.13□□□□□ -1.75
PTPN3P26045 LAP3P1-201ENST00000403648 294 ntBASIC4.13□□□□□ -1.75
PTPN3P26045 ZNF603P-201ENST00000405613 487 ntBASIC4.13□□□□□ -1.75
PTPN3P26045 RN7SKP177-201ENST00000410567 355 ntBASIC4.13□□□□□ -1.75
PTPN3P26045 HSPE1P12-201ENST00000412576 301 ntBASIC4.13□□□□□ -1.75
PTPN3P26045 TPT1P2-201ENST00000413105 503 ntBASIC4.13□□□□□ -1.75
PTPN3P26045 RPL31P2-201ENST00000413849 377 ntBASIC4.13□□□□□ -1.75
PTPN3P26045 Z75741.2-201ENST00000417272 1167 ntBASIC4.13□□□□□ -1.75
PTPN3P26045 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC4.13□□□□□ -1.75
PTPN3P26045 AC092832.1-201ENST00000422934 400 ntBASIC4.13□□□□□ -1.75
PTPN3P26045 RPF2P1-201ENST00000424137 906 ntBASIC4.13□□□□□ -1.75
PTPN3P26045 NANOGP5-201ENST00000424456 877 ntBASIC4.13□□□□□ -1.75
PTPN3P26045 USP12PY-201ENST00000427677 1064 ntBASIC4.13□□□□□ -1.75
PTPN3P26045 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC4.13□□□□□ -1.75
PTPN3P26045 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC4.13□□□□□ -1.75
PTPN3P26045 RPL36P19-201ENST00000430744 301 ntBASIC4.13□□□□□ -1.75
PTPN3P26045 RPS6P12-201ENST00000432491 726 ntBASIC4.13□□□□□ -1.75
PTPN3P26045 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC4.13□□□□□ -1.75
PTPN3P26045 AL356276.2-201ENST00000435919 558 ntBASIC4.13□□□□□ -1.75
PTPN3P26045 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC4.13□□□□□ -1.75
PTPN3P26045 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC4.13□□□□□ -1.75
PTPN3P26045 AC020898.1-201ENST00000474167 787 ntBASIC4.13□□□□□ -1.75
PTPN3P26045 CREM-230ENST00000474931 626 ntTSL 2 BASIC4.13□□□□□ -1.75
PTPN3P26045 AP000926.1-201ENST00000479573 241 ntBASIC4.13□□□□□ -1.75
PTPN3P26045 AC069528.1-202ENST00000482888 637 ntBASIC4.13□□□□□ -1.75
PTPN3P26045 RNF138P1-201ENST00000502765 546 ntBASIC4.13□□□□□ -1.75
PTPN3P26045 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC4.13□□□□□ -1.75
PTPN3P26045 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC4.13□□□□□ -1.75
PTPN3P26045 RNU4-60P-201ENST00000517239 135 ntBASIC4.13□□□□□ -1.75
PTPN3P26045 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC4.13□□□□□ -1.75
PTPN3P26045 AC023632.1-201ENST00000518463 375 ntBASIC4.13□□□□□ -1.75
PTPN3P26045 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC4.13□□□□□ -1.75
PTPN3P26045 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC4.13□□□□□ -1.75
PTPN3P26045 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.13□□□□□ -1.75
PTPN3P26045 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC4.13□□□□□ -1.75
PTPN3P26045 MTCO2P2-201ENST00000591258 225 ntBASIC4.13□□□□□ -1.75
PTPN3P26045 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC4.13□□□□□ -1.75
PTPN3P26045 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.13□□□□□ -1.75
PTPN3P26045 AL139395.1-201ENST00000603662 160 ntBASIC4.13□□□□□ -1.75
PTPN3P26045 AL390816.3-201ENST00000604527 1066 ntBASIC4.13□□□□□ -1.75
PTPN3P26045 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC4.13□□□□□ -1.75
PTPN3P26045 AC106052.1-201ENST00000608029 497 ntBASIC4.13□□□□□ -1.75
PTPN3P26045 AP005137.2-201ENST00000609238 400 ntBASIC4.13□□□□□ -1.75
PTPN3P26045 AL592148.2-201ENST00000612210 372 ntBASIC4.13□□□□□ -1.75
PTPN3P26045 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC4.13□□□□□ -1.75
PTPN3P26045 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC4.13□□□□□ -1.75
PTPN3P26045 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
PTPN3P26045 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC4.13□□□□□ -1.75
PTPN3P26045 AC068787.1-201ENST00000623908 691 ntBASIC4.13□□□□□ -1.75
PTPN3P26045 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.13□□□□□ -1.75
PTPN3P26045 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
PTPN3P26045 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
PTPN3P26045 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
PTPN3P26045 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.12□□□□□ -1.75
PTPN3P26045 AP000568.1-201ENST00000282964 442 ntBASIC4.12□□□□□ -1.75
PTPN3P26045 SNORA62-201ENST00000365493 153 ntBASIC4.12□□□□□ -1.75
PTPN3P26045 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
PTPN3P26045 ANAPC10P1-201ENST00000395991 556 ntBASIC4.12□□□□□ -1.75
PTPN3P26045 Y_RNA.625-201ENST00000411256 107 ntBASIC4.12□□□□□ -1.75
PTPN3P26045 AC073264.1-201ENST00000411508 416 ntBASIC4.12□□□□□ -1.75
PTPN3P26045 JKAMPP1-201ENST00000413804 919 ntBASIC4.12□□□□□ -1.75
PTPN3P26045 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC4.12□□□□□ -1.75
PTPN3P26045 RPS12P5-201ENST00000423449 371 ntBASIC4.12□□□□□ -1.75
PTPN3P26045 BLOC1S2P1-201ENST00000428431 301 ntBASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 119.7 ms