Protein–RNA interactions for Protein: P16070

CD44, CD44 antigen, humanhuman

Known RBP Predictions only

Length 742 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD44P16070 RNU6-12P-201ENST00000384604 107 ntBASIC7.87□□□□□ -1.15
CD44P16070 RNU6-2-201ENST00000384627 107 ntBASIC7.87□□□□□ -1.15
CD44P16070 RNU6-29P-201ENST00000384637 107 ntBASIC7.87□□□□□ -1.15
CD44P16070 RNU6-41P-201ENST00000384741 107 ntBASIC7.87□□□□□ -1.15
CD44P16070 RNU6-9-201ENST00000384776 107 ntBASIC7.87□□□□□ -1.15
CD44P16070 AC092573.2-201ENST00000434546 243 ntBASIC7.87□□□□□ -1.15
CD44P16070 GAPDHP27-201ENST00000447427 1020 ntBASIC7.87□□□□□ -1.15
CD44P16070 TRBV26-201ENST00000456572 344 ntBASIC7.87□□□□□ -1.15
CD44P16070 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC7.87□□□□□ -1.15
CD44P16070 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
CD44P16070 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC7.87□□□□□ -1.15
CD44P16070 AC018523.1-201ENST00000534211 512 ntBASIC7.87□□□□□ -1.15
CD44P16070 AL133271.1-201ENST00000538229 291 ntBASIC7.87□□□□□ -1.15
CD44P16070 EEF1B2P1-201ENST00000567221 672 ntBASIC7.87□□□□□ -1.15
CD44P16070 MIR4470-201ENST00000583453 72 ntBASIC7.87□□□□□ -1.15
CD44P16070 OR1M4P-201ENST00000589199 287 ntBASIC7.87□□□□□ -1.15
CD44P16070 AC023043.3-201ENST00000593113 385 ntBASIC7.87□□□□□ -1.15
CD44P16070 RNU6-6P-201ENST00000606623 107 ntBASIC7.87□□□□□ -1.15
CD44P16070 LAMTOR5-AS1-248ENST00000630488 703 ntTSL 5 BASIC7.87□□□□□ -1.15
CD44P16070 SYT4-201ENST00000255224 4110 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
CD44P16070 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
CD44P16070 YES1-201ENST00000314574 4441 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
CD44P16070 DNM1L-203ENST00000381000 4397 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
CD44P16070 SETD5-205ENST00000407969 6463 ntTSL 5 BASIC7.87□□□□□ -1.15
CD44P16070 AC108676.1-201ENST00000455557 2969 ntTSL 2 BASIC7.87□□□□□ -1.15
CD44P16070 CACNA2D3-212ENST00000620722 3296 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
CD44P16070 MGAT4A-202ENST00000393487 8382 ntAPPRIS P1 TSL 5 BASIC7.87□□□□□ -1.15
CD44P16070 OR2A42-202ENST00000641810 4946 ntAPPRIS P1 BASIC7.87□□□□□ -1.15
CD44P16070 CASP10-203ENST00000313728 1521 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
CD44P16070 GAS2-201ENST00000278187 2170 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
CD44P16070 DEPDC1B-201ENST00000265036 2499 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
CD44P16070 SPIRE1-206ENST00000453447 2107 ntTSL 5 BASIC7.87□□□□□ -1.15
CD44P16070 KAT6A-201ENST00000265713 9153 ntAPPRIS P3 TSL 1 (best) BASIC7.87□□□□□ -1.15
CD44P16070 MAVS-202ENST00000428216 11714 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
CD44P16070 BPIFC-203ENST00000397452 2091 ntAPPRIS P1 TSL 5 BASIC7.87□□□□□ -1.15
CD44P16070 RUNX1T1-205ENST00000436581 7454 ntTSL 5 BASIC7.86□□□□□ -1.15
CD44P16070 CLTC-210ENST00000579456 2301 ntTSL 5 BASIC7.86□□□□□ -1.15
CD44P16070 RBFOX2-205ENST00000405409 6932 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
CD44P16070 KCNMB2-204ENST00000432997 2552 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
CD44P16070 DCAF10-201ENST00000242323 7393 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
CD44P16070 MROH9-201ENST00000367758 2227 ntAPPRIS P3 TSL 1 (best) BASIC7.86□□□□□ -1.15
CD44P16070 LRMP-204ENST00000547044 2208 ntAPPRIS P2 TSL 1 (best) BASIC7.86□□□□□ -1.15
CD44P16070 TGFBR3-202ENST00000370399 4550 ntAPPRIS ALT1 TSL 1 (best) BASIC7.86□□□□□ -1.15
CD44P16070 AC123769.2-201ENST00000624332 5984 ntBASIC7.86□□□□□ -1.15
CD44P16070 LINC01360-203ENST00000440762 3871 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
CD44P16070 KCNA2-208ENST00000638616 3279 ntAPPRIS P1 TSL 5 BASIC7.86□□□□□ -1.15
CD44P16070 DEFB4A-201ENST00000302247 380 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
CD44P16070 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
CD44P16070 RNU6-989P-201ENST00000362756 107 ntBASIC7.86□□□□□ -1.15
CD44P16070 RNU6-317P-201ENST00000384031 107 ntBASIC7.86□□□□□ -1.15
CD44P16070 RNU2-2P-201ENST00000410396 191 ntBASIC7.86□□□□□ -1.15
CD44P16070 HCG25-217ENST00000422366 702 ntTSL 3 BASIC7.86□□□□□ -1.15
CD44P16070 RPL12P17-201ENST00000432393 498 ntBASIC7.86□□□□□ -1.15
CD44P16070 AC008264.1-201ENST00000447612 367 ntBASIC7.86□□□□□ -1.15
CD44P16070 ZNF562-202ENST00000453372 2111 ntAPPRIS P3 TSL 3 BASIC7.86□□□□□ -1.15
CD44P16070 RPS27AP1-201ENST00000475545 471 ntBASIC7.86□□□□□ -1.15
CD44P16070 RPS29P24-201ENST00000486345 171 ntBASIC7.86□□□□□ -1.15
CD44P16070 AL160314.1-201ENST00000490836 438 ntBASIC7.86□□□□□ -1.15
CD44P16070 RNU6-612P-201ENST00000516909 102 ntBASIC7.86□□□□□ -1.15
CD44P16070 RN7SKP183-201ENST00000517169 324 ntBASIC7.86□□□□□ -1.15
CD44P16070 AC090193.1-202ENST00000524355 566 ntTSL 4 BASIC7.86□□□□□ -1.15
CD44P16070 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC7.86□□□□□ -1.15
CD44P16070 AC091178.1-204ENST00000577328 366 ntTSL 4 BASIC7.86□□□□□ -1.15
CD44P16070 IGLJCOR18-201ENST00000584002 424 ntBASIC7.86□□□□□ -1.15
CD44P16070 RNU2-4P-201ENST00000606190 192 ntBASIC7.86□□□□□ -1.15
CD44P16070 RN7SL778P-201ENST00000607160 297 ntBASIC7.86□□□□□ -1.15
CD44P16070 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC7.86□□□□□ -1.15
CD44P16070 U2.15-201ENST00000611544 191 ntBASIC7.86□□□□□ -1.15
CD44P16070 U2.16-201ENST00000613119 191 ntBASIC7.86□□□□□ -1.15
CD44P16070 U2.12-201ENST00000613778 191 ntBASIC7.86□□□□□ -1.15
CD44P16070 U2.9-201ENST00000615427 191 ntBASIC7.86□□□□□ -1.15
CD44P16070 U2.11-201ENST00000616345 191 ntBASIC7.86□□□□□ -1.15
CD44P16070 U2.2-201ENST00000616535 191 ntBASIC7.86□□□□□ -1.15
CD44P16070 IL13-206ENST00000617259 498 ntAPPRIS ALT2 TSL 5 BASIC7.86□□□□□ -1.15
CD44P16070 U2.3-201ENST00000617785 191 ntBASIC7.86□□□□□ -1.15
CD44P16070 U2.19-201ENST00000618602 191 ntBASIC7.86□□□□□ -1.15
CD44P16070 RNU2-1-201ENST00000618664 191 ntBASIC7.86□□□□□ -1.15
CD44P16070 U2.6-201ENST00000619225 191 ntBASIC7.86□□□□□ -1.15
CD44P16070 U2.5-201ENST00000619465 191 ntBASIC7.86□□□□□ -1.15
CD44P16070 U2.10-201ENST00000620268 191 ntBASIC7.86□□□□□ -1.15
CD44P16070 AL589994.2-201ENST00000621124 579 ntBASIC7.86□□□□□ -1.15
CD44P16070 SLC14A1-201ENST00000321925 3971 ntAPPRIS P3 TSL 1 (best) BASIC7.86□□□□□ -1.15
CD44P16070 PPP4R3CP-201ENST00000412172 3131 ntAPPRIS P1 BASIC7.86□□□□□ -1.15
CD44P16070 PIK3R3-202ENST00000372006 5019 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
CD44P16070 MAP3K13-201ENST00000265026 9876 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
CD44P16070 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC7.86□□□□□ -1.15
CD44P16070 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC7.86□□□□□ -1.15
CD44P16070 OR7G2-202ENST00000641081 3015 ntAPPRIS ALT2 BASIC7.86□□□□□ -1.15
CD44P16070 NEDD9-216ENST00000620854 4086 ntTSL 5 BASIC7.86□□□□□ -1.15
CD44P16070 STK4-202ENST00000372806 6342 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
CD44P16070 TBX15-201ENST00000207157 3492 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
CD44P16070 SNTN-203ENST00000496807 3746 ntTSL 4 BASIC7.86□□□□□ -1.15
CD44P16070 DCDC2-201ENST00000378450 3684 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
CD44P16070 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC7.85□□□□□ -1.15
CD44P16070 MEF2C-232ENST00000629612 2851 ntTSL 5 BASIC7.85□□□□□ -1.15
CD44P16070 PDE4DIP-206ENST00000369356 8307 ntAPPRIS P4 TSL 1 (best) BASIC7.85□□□□□ -1.15
CD44P16070 ZNF33A-204ENST00000458705 6084 ntAPPRIS P3 TSL 1 (best) BASIC7.85□□□□□ -1.15
CD44P16070 CSDE1-218ENST00000610726 4312 ntTSL 5 BASIC7.85□□□□□ -1.15
CD44P16070 ATP2B4-204ENST00000367218 8918 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
CD44P16070 ZFP62-207ENST00000512132 4010 ntTSL 2 BASIC7.85□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 94.3 ms