Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 SNURFL-201ENST00000309296 343 ntBASIC7.14□□□□□ -1.27
CSB-PGBD3P0DP91 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
CSB-PGBD3P0DP91 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
CSB-PGBD3P0DP91 RNU6-845P-201ENST00000362578 103 ntBASIC7.14□□□□□ -1.27
CSB-PGBD3P0DP91 Y_RNA.144-201ENST00000363521 113 ntBASIC7.14□□□□□ -1.27
CSB-PGBD3P0DP91 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
CSB-PGBD3P0DP91 RNU1-136P-201ENST00000384181 164 ntBASIC7.14□□□□□ -1.27
CSB-PGBD3P0DP91 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
CSB-PGBD3P0DP91 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
CSB-PGBD3P0DP91 RNU4-64P-201ENST00000410795 131 ntBASIC7.14□□□□□ -1.27
CSB-PGBD3P0DP91 RPL12P9-201ENST00000412942 488 ntBASIC7.14□□□□□ -1.27
CSB-PGBD3P0DP91 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
CSB-PGBD3P0DP91 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC7.14□□□□□ -1.27
CSB-PGBD3P0DP91 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC7.14□□□□□ -1.27
CSB-PGBD3P0DP91 SNRPGP6-201ENST00000451124 220 ntBASIC7.14□□□□□ -1.27
CSB-PGBD3P0DP91 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
CSB-PGBD3P0DP91 SLC25A51P1-201ENST00000468432 871 ntBASIC7.14□□□□□ -1.27
CSB-PGBD3P0DP91 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC7.14□□□□□ -1.27
CSB-PGBD3P0DP91 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC7.14□□□□□ -1.27
CSB-PGBD3P0DP91 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC7.14□□□□□ -1.27
CSB-PGBD3P0DP91 CASP1-212ENST00000531166 300 ntTSL 5 BASIC7.14□□□□□ -1.27
CSB-PGBD3P0DP91 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC7.14□□□□□ -1.27
CSB-PGBD3P0DP91 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC7.14□□□□□ -1.27
CSB-PGBD3P0DP91 HSPA8P14-201ENST00000552265 1805 ntBASIC7.14□□□□□ -1.27
CSB-PGBD3P0DP91 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC7.14□□□□□ -1.27
CSB-PGBD3P0DP91 RN7SL52P-201ENST00000584271 284 ntBASIC7.14□□□□□ -1.27
CSB-PGBD3P0DP91 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
CSB-PGBD3P0DP91 NRBF2P5-201ENST00000603087 788 ntBASIC7.14□□□□□ -1.27
CSB-PGBD3P0DP91 AC104964.3-201ENST00000606115 2860 ntBASIC7.14□□□□□ -1.27
CSB-PGBD3P0DP91 AL022394.1-201ENST00000606979 292 ntBASIC7.14□□□□□ -1.27
CSB-PGBD3P0DP91 AC015712.7-201ENST00000615211 635 ntBASIC7.14□□□□□ -1.27
CSB-PGBD3P0DP91 AC108479.2-201ENST00000617314 601 ntBASIC7.14□□□□□ -1.27
CSB-PGBD3P0DP91 RN7SL722P-201ENST00000617780 284 ntBASIC7.14□□□□□ -1.27
CSB-PGBD3P0DP91 RN7SL565P-201ENST00000618246 284 ntBASIC7.14□□□□□ -1.27
CSB-PGBD3P0DP91 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC7.14□□□□□ -1.27
CSB-PGBD3P0DP91 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC7.14□□□□□ -1.27
CSB-PGBD3P0DP91 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
CSB-PGBD3P0DP91 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
CSB-PGBD3P0DP91 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
CSB-PGBD3P0DP91 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC7.14□□□□□ -1.27
CSB-PGBD3P0DP91 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
CSB-PGBD3P0DP91 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC7.13□□□□□ -1.27
CSB-PGBD3P0DP91 SNX18P3-202ENST00000565670 1750 ntBASIC7.13□□□□□ -1.27
CSB-PGBD3P0DP91 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
CSB-PGBD3P0DP91 Y_RNA.216-201ENST00000364205 93 ntBASIC7.13□□□□□ -1.27
CSB-PGBD3P0DP91 SNORA63C-201ENST00000364578 129 ntBASIC7.13□□□□□ -1.27
CSB-PGBD3P0DP91 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC7.13□□□□□ -1.27
CSB-PGBD3P0DP91 RNU6-767P-201ENST00000384132 107 ntBASIC7.13□□□□□ -1.27
CSB-PGBD3P0DP91 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC7.13□□□□□ -1.27
CSB-PGBD3P0DP91 MIR320C1-201ENST00000408566 88 ntBASIC7.13□□□□□ -1.27
CSB-PGBD3P0DP91 RPS3AP3-201ENST00000411933 242 ntBASIC7.13□□□□□ -1.27
CSB-PGBD3P0DP91 GJA6P-201ENST00000415117 1042 ntBASIC7.13□□□□□ -1.27
CSB-PGBD3P0DP91 BX295541.1-201ENST00000417774 250 ntBASIC7.13□□□□□ -1.27
CSB-PGBD3P0DP91 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC7.13□□□□□ -1.27
CSB-PGBD3P0DP91 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC7.13□□□□□ -1.27
CSB-PGBD3P0DP91 TRAPPC2P5-201ENST00000426293 308 ntBASIC7.13□□□□□ -1.27
CSB-PGBD3P0DP91 YWHAZP8-201ENST00000436935 731 ntBASIC7.13□□□□□ -1.27
CSB-PGBD3P0DP91 AC233279.1-201ENST00000455300 423 ntBASIC7.13□□□□□ -1.27
CSB-PGBD3P0DP91 FTH1P2-201ENST00000466086 412 ntBASIC7.13□□□□□ -1.27
CSB-PGBD3P0DP91 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC7.13□□□□□ -1.27
CSB-PGBD3P0DP91 RAD51AP1P1-201ENST00000484195 1001 ntBASIC7.13□□□□□ -1.27
CSB-PGBD3P0DP91 RN7SL591P-201ENST00000496150 292 ntBASIC7.13□□□□□ -1.27
CSB-PGBD3P0DP91 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC7.13□□□□□ -1.27
CSB-PGBD3P0DP91 NIFKP7-201ENST00000503365 834 ntBASIC7.13□□□□□ -1.27
CSB-PGBD3P0DP91 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC7.13□□□□□ -1.27
CSB-PGBD3P0DP91 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC7.13□□□□□ -1.27
CSB-PGBD3P0DP91 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC7.13□□□□□ -1.27
CSB-PGBD3P0DP91 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
CSB-PGBD3P0DP91 HIF1AP1-201ENST00000553642 175 ntBASIC7.13□□□□□ -1.27
CSB-PGBD3P0DP91 AC020661.2-201ENST00000560114 134 ntBASIC7.13□□□□□ -1.27
CSB-PGBD3P0DP91 AP000769.2-201ENST00000602344 396 ntBASIC7.13□□□□□ -1.27
CSB-PGBD3P0DP91 AL352984.2-202ENST00000613699 155 ntBASIC7.13□□□□□ -1.27
CSB-PGBD3P0DP91 AC005618.4-201ENST00000625053 554 ntBASIC7.13□□□□□ -1.27
CSB-PGBD3P0DP91 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC7.13□□□□□ -1.27
CSB-PGBD3P0DP91 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC7.13□□□□□ -1.27
CSB-PGBD3P0DP91 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
CSB-PGBD3P0DP91 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
CSB-PGBD3P0DP91 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
CSB-PGBD3P0DP91 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC7.13□□□□□ -1.27
CSB-PGBD3P0DP91 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
CSB-PGBD3P0DP91 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
CSB-PGBD3P0DP91 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
CSB-PGBD3P0DP91 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC7.12□□□□□ -1.27
CSB-PGBD3P0DP91 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
CSB-PGBD3P0DP91 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
CSB-PGBD3P0DP91 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
CSB-PGBD3P0DP91 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
CSB-PGBD3P0DP91 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC7.12□□□□□ -1.27
CSB-PGBD3P0DP91 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC7.12□□□□□ -1.27
CSB-PGBD3P0DP91 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC7.12□□□□□ -1.27
CSB-PGBD3P0DP91 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC7.12□□□□□ -1.27
CSB-PGBD3P0DP91 RNU6-1085P-201ENST00000363576 107 ntBASIC7.12□□□□□ -1.27
CSB-PGBD3P0DP91 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC7.12□□□□□ -1.27
CSB-PGBD3P0DP91 MAST4-207ENST00000407621 559 ntTSL 2 BASIC7.12□□□□□ -1.27
CSB-PGBD3P0DP91 AL161631.1-201ENST00000417933 486 ntBASIC7.12□□□□□ -1.27
CSB-PGBD3P0DP91 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC7.12□□□□□ -1.27
CSB-PGBD3P0DP91 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC7.12□□□□□ -1.27
CSB-PGBD3P0DP91 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC7.12□□□□□ -1.27
CSB-PGBD3P0DP91 SAR1AP4-201ENST00000429225 591 ntBASIC7.12□□□□□ -1.27
CSB-PGBD3P0DP91 TEX41-205ENST00000431734 529 ntTSL 4 BASIC7.12□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 95.9 ms