Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 PDCL2P2-201ENST00000533651 189 ntBASIC4.56□□□□□ -1.68
MMP3P08254 AC010198.2-201ENST00000550612 259 ntBASIC4.56□□□□□ -1.68
MMP3P08254 AC063950.1-201ENST00000552036 308 ntBASIC4.56□□□□□ -1.68
MMP3P08254 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC4.56□□□□□ -1.68
MMP3P08254 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC4.56□□□□□ -1.68
MMP3P08254 MIR3936-201ENST00000584304 110 ntBASIC4.56□□□□□ -1.68
MMP3P08254 AC110743.1-201ENST00000584870 478 ntBASIC4.56□□□□□ -1.68
MMP3P08254 AC107982.3-201ENST00000584957 985 ntBASIC4.56□□□□□ -1.68
MMP3P08254 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC4.56□□□□□ -1.68
MMP3P08254 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC4.56□□□□□ -1.68
MMP3P08254 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC4.56□□□□□ -1.68
MMP3P08254 AL109653.1-201ENST00000603091 248 ntBASIC4.56□□□□□ -1.68
MMP3P08254 MRPS35P3-201ENST00000603189 709 ntBASIC4.56□□□□□ -1.68
MMP3P08254 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC4.56□□□□□ -1.68
MMP3P08254 AC133552.5-201ENST00000604266 540 ntBASIC4.56□□□□□ -1.68
MMP3P08254 Z94722.1-201ENST00000604328 474 ntBASIC4.56□□□□□ -1.68
MMP3P08254 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC4.56□□□□□ -1.68
MMP3P08254 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC4.56□□□□□ -1.68
MMP3P08254 AC131238.1-201ENST00000617135 328 ntBASIC4.56□□□□□ -1.68
MMP3P08254 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.56□□□□□ -1.68
MMP3P08254 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC4.56□□□□□ -1.68
MMP3P08254 PACRG-211ENST00000621363 360 ntTSL 5 BASIC4.56□□□□□ -1.68
MMP3P08254 AC067852.7-201ENST00000623270 535 ntBASIC4.56□□□□□ -1.68
MMP3P08254 AC004943.3-201ENST00000624116 600 ntBASIC4.56□□□□□ -1.68
MMP3P08254 AC007490.1-201ENST00000624321 703 ntBASIC4.56□□□□□ -1.68
MMP3P08254 MIR1322-201ENST00000638013 71 ntBASIC4.56□□□□□ -1.68
MMP3P08254 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC4.56□□□□□ -1.68
MMP3P08254 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
MMP3P08254 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
MMP3P08254 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
MMP3P08254 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
MMP3P08254 SLC2A3P1-201ENST00000519666 1451 ntBASIC4.56□□□□□ -1.68
MMP3P08254 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
MMP3P08254 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
MMP3P08254 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
MMP3P08254 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
MMP3P08254 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
MMP3P08254 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
MMP3P08254 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.55□□□□□ -1.68
MMP3P08254 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
MMP3P08254 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC4.55□□□□□ -1.68
MMP3P08254 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
MMP3P08254 RNU6-213P-201ENST00000384051 104 ntBASIC4.55□□□□□ -1.68
MMP3P08254 SNORD116-8-201ENST00000384365 95 ntBASIC4.55□□□□□ -1.68
MMP3P08254 MIR195-201ENST00000385194 87 ntBASIC4.55□□□□□ -1.68
MMP3P08254 GSTA8P-201ENST00000404253 637 ntBASIC4.55□□□□□ -1.68
MMP3P08254 AL590290.1-201ENST00000405336 380 ntBASIC4.55□□□□□ -1.68
MMP3P08254 MIR1271-201ENST00000408537 86 ntBASIC4.55□□□□□ -1.68
MMP3P08254 RPL7P53-201ENST00000421245 739 ntBASIC4.55□□□□□ -1.68
MMP3P08254 AC018644.1-201ENST00000429934 551 ntBASIC4.55□□□□□ -1.68
MMP3P08254 MTCO3P21-201ENST00000430791 643 ntBASIC4.55□□□□□ -1.68
MMP3P08254 AL358472.1-201ENST00000431295 329 ntBASIC4.55□□□□□ -1.68
MMP3P08254 RPL21P110-201ENST00000433345 446 ntBASIC4.55□□□□□ -1.68
MMP3P08254 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC4.55□□□□□ -1.68
MMP3P08254 HMGB1P48-201ENST00000446155 598 ntBASIC4.55□□□□□ -1.68
MMP3P08254 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC4.55□□□□□ -1.68
MMP3P08254 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC4.55□□□□□ -1.68
MMP3P08254 PTMAP3-201ENST00000447474 330 ntBASIC4.55□□□□□ -1.68
MMP3P08254 AC022431.1-201ENST00000450941 438 ntBASIC4.55□□□□□ -1.68
MMP3P08254 AL133217.1-201ENST00000450980 425 ntBASIC4.55□□□□□ -1.68
MMP3P08254 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC4.55□□□□□ -1.68
MMP3P08254 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC4.55□□□□□ -1.68
MMP3P08254 BET1P1-201ENST00000482276 359 ntBASIC4.55□□□□□ -1.68
MMP3P08254 AC005912.1-201ENST00000495392 255 ntBASIC4.55□□□□□ -1.68
MMP3P08254 RPL29P14-201ENST00000495837 428 ntBASIC4.55□□□□□ -1.68
MMP3P08254 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
MMP3P08254 DYNLL1P6-201ENST00000503440 264 ntBASIC4.55□□□□□ -1.68
MMP3P08254 AC021146.8-201ENST00000507455 733 ntBASIC4.55□□□□□ -1.68
MMP3P08254 OR5H4P-201ENST00000510851 923 ntBASIC4.55□□□□□ -1.68
MMP3P08254 AC010486.3-201ENST00000511602 785 ntBASIC4.55□□□□□ -1.68
MMP3P08254 AC109471.1-201ENST00000511631 612 ntBASIC4.55□□□□□ -1.68
MMP3P08254 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC4.55□□□□□ -1.68
MMP3P08254 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC4.55□□□□□ -1.68
MMP3P08254 LY96-202ENST00000518893 430 ntTSL 3 BASIC4.55□□□□□ -1.68
MMP3P08254 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC4.55□□□□□ -1.68
MMP3P08254 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC4.55□□□□□ -1.68
MMP3P08254 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC4.55□□□□□ -1.68
MMP3P08254 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC4.55□□□□□ -1.68
MMP3P08254 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC4.55□□□□□ -1.68
MMP3P08254 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC4.55□□□□□ -1.68
MMP3P08254 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.55□□□□□ -1.68
MMP3P08254 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC4.55□□□□□ -1.68
MMP3P08254 MIR3912-201ENST00000577566 105 ntBASIC4.55□□□□□ -1.68
MMP3P08254 AC005255.1-201ENST00000593748 216 ntBASIC4.55□□□□□ -1.68
MMP3P08254 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC4.55□□□□□ -1.68
MMP3P08254 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC4.55□□□□□ -1.68
MMP3P08254 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
MMP3P08254 AC022106.2-201ENST00000620114 757 ntBASIC4.55□□□□□ -1.68
MMP3P08254 AL354798.1-201ENST00000622505 329 ntBASIC4.55□□□□□ -1.68
MMP3P08254 CCT7-217ENST00000626868 249 ntTSL 5 BASIC4.55□□□□□ -1.68
MMP3P08254 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
MMP3P08254 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.55□□□□□ -1.68
MMP3P08254 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.55□□□□□ -1.68
MMP3P08254 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
MMP3P08254 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
MMP3P08254 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
MMP3P08254 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
MMP3P08254 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
MMP3P08254 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC4.54□□□□□ -1.68
MMP3P08254 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 112.1 ms