Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC5.18□□□□□ -1.58
HLA-DOAP06340 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC5.18□□□□□ -1.58
HLA-DOAP06340 OR5BC1P-201ENST00000529327 739 ntBASIC5.18□□□□□ -1.58
HLA-DOAP06340 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC5.18□□□□□ -1.58
HLA-DOAP06340 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC5.18□□□□□ -1.58
HLA-DOAP06340 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
HLA-DOAP06340 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC5.18□□□□□ -1.58
HLA-DOAP06340 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC5.18□□□□□ -1.58
HLA-DOAP06340 TVP23BP1-201ENST00000557500 617 ntBASIC5.18□□□□□ -1.58
HLA-DOAP06340 AC234778.2-201ENST00000566241 354 ntBASIC5.18□□□□□ -1.58
HLA-DOAP06340 AC087683.1-201ENST00000591187 441 ntBASIC5.18□□□□□ -1.58
HLA-DOAP06340 AC010857.1-201ENST00000606398 594 ntBASIC5.18□□□□□ -1.58
HLA-DOAP06340 AC008498.1-201ENST00000613012 531 ntBASIC5.18□□□□□ -1.58
HLA-DOAP06340 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC5.18□□□□□ -1.58
HLA-DOAP06340 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
HLA-DOAP06340 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC5.18□□□□□ -1.58
HLA-DOAP06340 FTO-223ENST00000640179 210 ntTSL 5 BASIC5.18□□□□□ -1.58
HLA-DOAP06340 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC5.18□□□□□ -1.58
HLA-DOAP06340 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
HLA-DOAP06340 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
HLA-DOAP06340 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
HLA-DOAP06340 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
HLA-DOAP06340 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
HLA-DOAP06340 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC5.17□□□□□ -1.58
HLA-DOAP06340 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
HLA-DOAP06340 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.17□□□□□ -1.58
HLA-DOAP06340 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC5.17□□□□□ -1.58
HLA-DOAP06340 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
HLA-DOAP06340 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
HLA-DOAP06340 RNA5SP175-201ENST00000364275 119 ntBASIC5.17□□□□□ -1.58
HLA-DOAP06340 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
HLA-DOAP06340 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
HLA-DOAP06340 SNORA11C-201ENST00000408532 129 ntBASIC5.17□□□□□ -1.58
HLA-DOAP06340 RPL30P16-201ENST00000419341 429 ntBASIC5.17□□□□□ -1.58
HLA-DOAP06340 HMGN2P27-201ENST00000427352 270 ntBASIC5.17□□□□□ -1.58
HLA-DOAP06340 AC022022.1-201ENST00000430304 178 ntBASIC5.17□□□□□ -1.58
HLA-DOAP06340 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC5.17□□□□□ -1.58
HLA-DOAP06340 HMGB3P10-201ENST00000434734 572 ntBASIC5.17□□□□□ -1.58
HLA-DOAP06340 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC5.17□□□□□ -1.58
HLA-DOAP06340 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC5.17□□□□□ -1.58
HLA-DOAP06340 AC093155.1-201ENST00000440164 826 ntBASIC5.17□□□□□ -1.58
HLA-DOAP06340 TRIM60P18-201ENST00000441518 828 ntBASIC5.17□□□□□ -1.58
HLA-DOAP06340 AL353572.1-201ENST00000442490 417 ntBASIC5.17□□□□□ -1.58
HLA-DOAP06340 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC5.17□□□□□ -1.58
HLA-DOAP06340 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC5.17□□□□□ -1.58
HLA-DOAP06340 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC5.17□□□□□ -1.58
HLA-DOAP06340 RPL7AP52-201ENST00000458096 790 ntBASIC5.17□□□□□ -1.58
HLA-DOAP06340 RNU7-27P-201ENST00000459281 62 ntBASIC5.17□□□□□ -1.58
HLA-DOAP06340 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
HLA-DOAP06340 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
HLA-DOAP06340 AC008958.1-201ENST00000511047 682 ntBASIC5.17□□□□□ -1.58
HLA-DOAP06340 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC5.17□□□□□ -1.58
HLA-DOAP06340 RNU6-678P-201ENST00000516832 109 ntBASIC5.17□□□□□ -1.58
HLA-DOAP06340 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC5.17□□□□□ -1.58
HLA-DOAP06340 AC007954.1-201ENST00000554198 494 ntBASIC5.17□□□□□ -1.58
HLA-DOAP06340 AL133241.1-201ENST00000556832 487 ntBASIC5.17□□□□□ -1.58
HLA-DOAP06340 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC5.17□□□□□ -1.58
HLA-DOAP06340 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC5.17□□□□□ -1.58
HLA-DOAP06340 AC022884.3-201ENST00000579571 248 ntBASIC5.17□□□□□ -1.58
HLA-DOAP06340 ABBA01006766.1-201ENST00000584728 294 ntBASIC5.17□□□□□ -1.58
HLA-DOAP06340 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
HLA-DOAP06340 AC083899.3-201ENST00000603413 594 ntBASIC5.17□□□□□ -1.58
HLA-DOAP06340 Z99129.1-201ENST00000612510 255 ntBASIC5.17□□□□□ -1.58
HLA-DOAP06340 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC5.17□□□□□ -1.58
HLA-DOAP06340 AC023158.2-201ENST00000614876 543 ntBASIC5.17□□□□□ -1.58
HLA-DOAP06340 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC5.17□□□□□ -1.58
HLA-DOAP06340 AC069209.1-201ENST00000619282 651 ntBASIC5.17□□□□□ -1.58
HLA-DOAP06340 AL356121.2-201ENST00000624715 780 ntBASIC5.17□□□□□ -1.58
HLA-DOAP06340 AC099654.13-201ENST00000639774 207 ntBASIC5.17□□□□□ -1.58
HLA-DOAP06340 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.17□□□□□ -1.58
HLA-DOAP06340 AC093311.1-201ENST00000506586 2021 ntBASIC5.17□□□□□ -1.58
HLA-DOAP06340 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC5.17□□□□□ -1.58
HLA-DOAP06340 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.17□□□□□ -1.58
HLA-DOAP06340 AC011477.1-204ENST00000623416 1325 ntBASIC5.17□□□□□ -1.58
HLA-DOAP06340 AC000374.1-201ENST00000434698 1745 ntBASIC5.17□□□□□ -1.58
HLA-DOAP06340 CDC27P2-201ENST00000425026 1922 ntBASIC5.17□□□□□ -1.58
HLA-DOAP06340 MTCO1P6-201ENST00000481192 1384 ntBASIC5.16□□□□□ -1.58
HLA-DOAP06340 ARHGAP42P1-201ENST00000507474 1976 ntBASIC5.16□□□□□ -1.58
HLA-DOAP06340 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC5.16□□□□□ -1.58
HLA-DOAP06340 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
HLA-DOAP06340 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC5.16□□□□□ -1.58
HLA-DOAP06340 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
HLA-DOAP06340 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC5.16□□□□□ -1.58
HLA-DOAP06340 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC5.16□□□□□ -1.58
HLA-DOAP06340 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
HLA-DOAP06340 AC095050.2-201ENST00000510748 1458 ntBASIC5.16□□□□□ -1.58
HLA-DOAP06340 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
HLA-DOAP06340 RNU6-500P-201ENST00000362349 107 ntBASIC5.16□□□□□ -1.58
HLA-DOAP06340 RNA5SP28-201ENST00000363841 119 ntBASIC5.16□□□□□ -1.58
HLA-DOAP06340 RNU6-1283P-201ENST00000365314 105 ntBASIC5.16□□□□□ -1.58
HLA-DOAP06340 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC5.16□□□□□ -1.58
HLA-DOAP06340 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC5.16□□□□□ -1.58
HLA-DOAP06340 FCF1P9-201ENST00000412546 282 ntBASIC5.16□□□□□ -1.58
HLA-DOAP06340 CDK8P2-201ENST00000415020 547 ntBASIC5.16□□□□□ -1.58
HLA-DOAP06340 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC5.16□□□□□ -1.58
HLA-DOAP06340 AC104651.1-201ENST00000427559 735 ntBASIC5.16□□□□□ -1.58
HLA-DOAP06340 USP9YP31-201ENST00000431405 881 ntBASIC5.16□□□□□ -1.58
HLA-DOAP06340 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC5.16□□□□□ -1.58
HLA-DOAP06340 AL512326.1-201ENST00000443050 721 ntBASIC5.16□□□□□ -1.58
HLA-DOAP06340 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 110.6 ms