Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC3.64□□□□□ -1.83
COL4A1P02462 U3.42-201ENST00000408746 214 ntBASIC3.64□□□□□ -1.83
COL4A1P02462 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC3.64□□□□□ -1.83
COL4A1P02462 LINC02374-201ENST00000503637 743 ntTSL 3 BASIC3.64□□□□□ -1.83
COL4A1P02462 RFPL4AP5-201ENST00000514977 504 ntBASIC3.64□□□□□ -1.83
COL4A1P02462 MIR2114-201ENST00000516645 80 ntBASIC3.64□□□□□ -1.83
COL4A1P02462 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC3.64□□□□□ -1.83
COL4A1P02462 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC3.64□□□□□ -1.83
COL4A1P02462 AC103881.1-201ENST00000603476 538 ntBASIC3.64□□□□□ -1.83
COL4A1P02462 AC007619.2-201ENST00000605743 379 ntBASIC3.64□□□□□ -1.83
COL4A1P02462 RMST_9.1-201ENST00000619945 193 ntBASIC3.64□□□□□ -1.83
COL4A1P02462 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
COL4A1P02462 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
COL4A1P02462 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
COL4A1P02462 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC3.63□□□□□ -1.83
COL4A1P02462 HMGN1P18-201ENST00000457642 277 ntBASIC3.63□□□□□ -1.83
COL4A1P02462 RN7SL432P-201ENST00000484057 298 ntBASIC3.63□□□□□ -1.83
COL4A1P02462 RNA5SP367-201ENST00000516557 118 ntBASIC3.63□□□□□ -1.83
COL4A1P02462 AL139174.1-201ENST00000531489 886 ntBASIC3.63□□□□□ -1.83
COL4A1P02462 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.63□□□□□ -1.83
COL4A1P02462 NRBF2P5-201ENST00000603087 788 ntBASIC3.63□□□□□ -1.83
COL4A1P02462 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
COL4A1P02462 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
COL4A1P02462 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
COL4A1P02462 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC3.63□□□□□ -1.83
COL4A1P02462 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC3.62□□□□□ -1.83
COL4A1P02462 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC3.62□□□□□ -1.83
COL4A1P02462 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
COL4A1P02462 RNU1-112P-201ENST00000364401 164 ntBASIC3.62□□□□□ -1.83
COL4A1P02462 MIR184-201ENST00000384962 84 ntBASIC3.62□□□□□ -1.83
COL4A1P02462 RNA5SP184-201ENST00000411071 108 ntBASIC3.62□□□□□ -1.83
COL4A1P02462 AC126389.1-201ENST00000477436 290 ntBASIC3.62□□□□□ -1.83
COL4A1P02462 RPS6P4-201ENST00000494693 758 ntBASIC3.62□□□□□ -1.83
COL4A1P02462 AC021146.1-201ENST00000511202 716 ntBASIC3.62□□□□□ -1.83
COL4A1P02462 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC3.62□□□□□ -1.83
COL4A1P02462 COX6CP8-201ENST00000522620 226 ntBASIC3.62□□□□□ -1.83
COL4A1P02462 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.62□□□□□ -1.83
COL4A1P02462 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC3.62□□□□□ -1.83
COL4A1P02462 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.62□□□□□ -1.83
COL4A1P02462 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
COL4A1P02462 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
COL4A1P02462 AL139095.1-201ENST00000404326 391 ntBASIC3.62□□□□□ -1.83
COL4A1P02462 RNU2-52P-201ENST00000410680 190 ntBASIC3.62□□□□□ -1.83
COL4A1P02462 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC3.62□□□□□ -1.83
COL4A1P02462 AL160175.1-201ENST00000428124 247 ntBASIC3.62□□□□□ -1.83
COL4A1P02462 RPL7P28-201ENST00000437739 740 ntBASIC3.62□□□□□ -1.83
COL4A1P02462 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC3.62□□□□□ -1.83
COL4A1P02462 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC3.62□□□□□ -1.83
COL4A1P02462 Z82195.1-201ENST00000604558 398 ntBASIC3.62□□□□□ -1.83
COL4A1P02462 AC231759.1-201ENST00000616455 597 ntBASIC3.62□□□□□ -1.83
COL4A1P02462 CYCSP41-201ENST00000616920 296 ntBASIC3.62□□□□□ -1.83
COL4A1P02462 AP003485.2-201ENST00000623636 610 ntBASIC3.62□□□□□ -1.83
COL4A1P02462 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.61□□□□□ -1.83
COL4A1P02462 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
COL4A1P02462 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
COL4A1P02462 AC000403.1-201ENST00000613696 3585 ntBASIC3.61□□□□□ -1.83
COL4A1P02462 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
COL4A1P02462 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC3.61□□□□□ -1.83
COL4A1P02462 AL592494.2-201ENST00000425455 1548 ntBASIC3.61□□□□□ -1.83
COL4A1P02462 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC3.61□□□□□ -1.83
COL4A1P02462 AC022018.1-201ENST00000430685 241 ntBASIC3.61□□□□□ -1.83
COL4A1P02462 RPL31P50-201ENST00000471002 296 ntBASIC3.61□□□□□ -1.83
COL4A1P02462 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC3.61□□□□□ -1.83
COL4A1P02462 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.61□□□□□ -1.83
COL4A1P02462 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC3.61□□□□□ -1.83
COL4A1P02462 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC3.61□□□□□ -1.83
COL4A1P02462 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
COL4A1P02462 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.61□□□□□ -1.83
COL4A1P02462 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
COL4A1P02462 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC3.6□□□□□ -1.83
COL4A1P02462 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC3.6□□□□□ -1.83
COL4A1P02462 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.6□□□□□ -1.83
COL4A1P02462 RPS7P13-201ENST00000413955 498 ntBASIC3.6□□□□□ -1.83
COL4A1P02462 RPS12P23-201ENST00000419579 400 ntBASIC3.6□□□□□ -1.83
COL4A1P02462 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
COL4A1P02462 AL645937.1-202ENST00000421799 937 ntBASIC3.6□□□□□ -1.83
COL4A1P02462 GTF2IP23-201ENST00000423746 351 ntBASIC3.6□□□□□ -1.83
COL4A1P02462 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC3.6□□□□□ -1.83
COL4A1P02462 NIPA2P5-201ENST00000452282 464 ntBASIC3.6□□□□□ -1.83
COL4A1P02462 RPL31P13-201ENST00000484151 370 ntBASIC3.6□□□□□ -1.83
COL4A1P02462 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC3.6□□□□□ -1.83
COL4A1P02462 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC3.6□□□□□ -1.83
COL4A1P02462 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC3.6□□□□□ -1.83
COL4A1P02462 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC3.6□□□□□ -1.83
COL4A1P02462 AL353684.1-201ENST00000622677 1120 ntBASIC3.6□□□□□ -1.83
COL4A1P02462 AC073476.4-201ENST00000628409 72 ntBASIC3.6□□□□□ -1.83
COL4A1P02462 AL136360.1-201ENST00000503377 1900 ntBASIC3.6□□□□□ -1.83
COL4A1P02462 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
COL4A1P02462 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC3.59□□□□□ -1.83
COL4A1P02462 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC3.59□□□□□ -1.83
COL4A1P02462 RPS27AP1-201ENST00000475545 471 ntBASIC3.59□□□□□ -1.83
COL4A1P02462 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC3.59□□□□□ -1.83
COL4A1P02462 AC022882.1-201ENST00000532142 501 ntBASIC3.59□□□□□ -1.83
COL4A1P02462 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC3.59□□□□□ -1.83
COL4A1P02462 AC015911.5-201ENST00000587076 451 ntBASIC3.59□□□□□ -1.83
COL4A1P02462 AL365503.1-201ENST00000605247 905 ntBASIC3.59□□□□□ -1.83
COL4A1P02462 AC019080.5-201ENST00000624891 757 ntBASIC3.59□□□□□ -1.83
COL4A1P02462 AC073869.7-201ENST00000640874 297 ntBASIC3.59□□□□□ -1.83
COL4A1P02462 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
COL4A1P02462 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 84.9 ms