Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC6.22□□□□□ -1.41
RAPGEF3O95398 DUXAP11-201ENST00000603858 526 ntBASIC6.22□□□□□ -1.41
RAPGEF3O95398 AC106791.2-201ENST00000604680 391 ntBASIC6.22□□□□□ -1.41
RAPGEF3O95398 AC105129.3-201ENST00000605455 485 ntBASIC6.22□□□□□ -1.41
RAPGEF3O95398 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
RAPGEF3O95398 AL354976.1-201ENST00000613843 387 ntBASIC6.22□□□□□ -1.41
RAPGEF3O95398 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC6.22□□□□□ -1.41
RAPGEF3O95398 OR5BE1P-202ENST00000641168 1176 ntBASIC6.22□□□□□ -1.41
RAPGEF3O95398 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
RAPGEF3O95398 AP000776.1-201ENST00000530032 1663 ntBASIC6.22□□□□□ -1.41
RAPGEF3O95398 LDHAL6CP-202ENST00000550738 3224 ntBASIC6.22□□□□□ -1.41
RAPGEF3O95398 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
RAPGEF3O95398 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
RAPGEF3O95398 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC6.21□□□□□ -1.41
RAPGEF3O95398 RNF6P1-201ENST00000444889 1784 ntBASIC6.21□□□□□ -1.41
RAPGEF3O95398 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
RAPGEF3O95398 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
RAPGEF3O95398 Z95114.1-201ENST00000624264 14574 ntBASIC6.21□□□□□ -1.42
RAPGEF3O95398 SNORD3H-201ENST00000384486 214 ntBASIC6.21□□□□□ -1.42
RAPGEF3O95398 SETP15-201ENST00000412724 337 ntBASIC6.21□□□□□ -1.42
RAPGEF3O95398 AL450992.3-201ENST00000413192 568 ntBASIC6.21□□□□□ -1.42
RAPGEF3O95398 RPS29P4-201ENST00000414733 161 ntBASIC6.21□□□□□ -1.42
RAPGEF3O95398 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC6.21□□□□□ -1.42
RAPGEF3O95398 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC6.21□□□□□ -1.42
RAPGEF3O95398 AL159987.2-201ENST00000432754 307 ntBASIC6.21□□□□□ -1.42
RAPGEF3O95398 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC6.21□□□□□ -1.42
RAPGEF3O95398 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC6.21□□□□□ -1.42
RAPGEF3O95398 MTND3P1-201ENST00000441336 220 ntBASIC6.21□□□□□ -1.42
RAPGEF3O95398 MRPL48P1-201ENST00000445390 636 ntBASIC6.21□□□□□ -1.42
RAPGEF3O95398 AL035551.1-201ENST00000446931 348 ntBASIC6.21□□□□□ -1.42
RAPGEF3O95398 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
RAPGEF3O95398 WBP1LP4-201ENST00000505043 344 ntBASIC6.21□□□□□ -1.42
RAPGEF3O95398 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC6.21□□□□□ -1.42
RAPGEF3O95398 RERGL-202ENST00000536890 367 ntTSL 3 BASIC6.21□□□□□ -1.42
RAPGEF3O95398 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC6.21□□□□□ -1.42
RAPGEF3O95398 RPL23AP97-201ENST00000568955 471 ntBASIC6.21□□□□□ -1.42
RAPGEF3O95398 AC090312.1-201ENST00000580637 348 ntBASIC6.21□□□□□ -1.42
RAPGEF3O95398 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC6.21□□□□□ -1.42
RAPGEF3O95398 AC022069.1-201ENST00000582910 658 ntBASIC6.21□□□□□ -1.42
RAPGEF3O95398 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC6.21□□□□□ -1.42
RAPGEF3O95398 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC6.21□□□□□ -1.42
RAPGEF3O95398 VN1R82P-201ENST00000601481 356 ntBASIC6.21□□□□□ -1.42
RAPGEF3O95398 AC146944.4-201ENST00000602697 718 ntBASIC6.21□□□□□ -1.42
RAPGEF3O95398 AC023158.2-201ENST00000614876 543 ntBASIC6.21□□□□□ -1.42
RAPGEF3O95398 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
RAPGEF3O95398 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
RAPGEF3O95398 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
RAPGEF3O95398 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC6.21□□□□□ -1.42
RAPGEF3O95398 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC6.21□□□□□ -1.42
RAPGEF3O95398 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
RAPGEF3O95398 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
RAPGEF3O95398 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
RAPGEF3O95398 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
RAPGEF3O95398 AC100778.3-201ENST00000580060 1750 ntBASIC6.21□□□□□ -1.42
RAPGEF3O95398 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC6.21□□□□□ -1.42
RAPGEF3O95398 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC6.21□□□□□ -1.42
RAPGEF3O95398 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC6.2□□□□□ -1.42
RAPGEF3O95398 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC6.2□□□□□ -1.42
RAPGEF3O95398 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
RAPGEF3O95398 AC025263.3-201ENST00000622965 1396 ntBASIC6.2□□□□□ -1.42
RAPGEF3O95398 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
RAPGEF3O95398 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC6.2□□□□□ -1.42
RAPGEF3O95398 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC6.2□□□□□ -1.42
RAPGEF3O95398 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC6.2□□□□□ -1.42
RAPGEF3O95398 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
RAPGEF3O95398 RNU1-83P-201ENST00000363426 164 ntBASIC6.2□□□□□ -1.42
RAPGEF3O95398 Y_RNA.318-201ENST00000365131 97 ntBASIC6.2□□□□□ -1.42
RAPGEF3O95398 TAF9BP1-201ENST00000396646 746 ntBASIC6.2□□□□□ -1.42
RAPGEF3O95398 TMSB4XP8-201ENST00000402089 135 ntBASIC6.2□□□□□ -1.42
RAPGEF3O95398 TMSB4XP6-201ENST00000415187 135 ntBASIC6.2□□□□□ -1.42
RAPGEF3O95398 AC011233.1-201ENST00000422812 283 ntBASIC6.2□□□□□ -1.42
RAPGEF3O95398 TMSB4XP1-201ENST00000424567 135 ntBASIC6.2□□□□□ -1.42
RAPGEF3O95398 AL354941.1-201ENST00000438600 464 ntBASIC6.2□□□□□ -1.42
RAPGEF3O95398 RPS7P5-201ENST00000441482 581 ntBASIC6.2□□□□□ -1.42
RAPGEF3O95398 RPL23AP76-201ENST00000441860 458 ntBASIC6.2□□□□□ -1.42
RAPGEF3O95398 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC6.2□□□□□ -1.42
RAPGEF3O95398 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC6.2□□□□□ -1.42
RAPGEF3O95398 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC6.2□□□□□ -1.42
RAPGEF3O95398 RPL31P3-201ENST00000458430 332 ntBASIC6.2□□□□□ -1.42
RAPGEF3O95398 RPL5P24-201ENST00000463742 885 ntBASIC6.2□□□□□ -1.42
RAPGEF3O95398 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC6.2□□□□□ -1.42
RAPGEF3O95398 AC008837.2-201ENST00000513076 418 ntBASIC6.2□□□□□ -1.42
RAPGEF3O95398 AC108471.1-201ENST00000513977 287 ntBASIC6.2□□□□□ -1.42
RAPGEF3O95398 RNU1-103P-201ENST00000516502 125 ntBASIC6.2□□□□□ -1.42
RAPGEF3O95398 RNU6-232P-201ENST00000517144 64 ntBASIC6.2□□□□□ -1.42
RAPGEF3O95398 AC105185.1-201ENST00000518705 535 ntBASIC6.2□□□□□ -1.42
RAPGEF3O95398 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC6.2□□□□□ -1.42
RAPGEF3O95398 AC090616.2-202ENST00000584248 222 ntBASIC6.2□□□□□ -1.42
RAPGEF3O95398 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC6.2□□□□□ -1.42
RAPGEF3O95398 AC009220.3-201ENST00000604318 586 ntBASIC6.2□□□□□ -1.42
RAPGEF3O95398 AL451074.6-201ENST00000608512 729 ntBASIC6.2□□□□□ -1.42
RAPGEF3O95398 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
RAPGEF3O95398 WAC-209ENST00000428935 1320 ntTSL 2 BASIC6.2□□□□□ -1.42
RAPGEF3O95398 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
RAPGEF3O95398 AP000473.2-201ENST00000602659 1537 ntBASIC6.2□□□□□ -1.42
RAPGEF3O95398 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
RAPGEF3O95398 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
RAPGEF3O95398 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
RAPGEF3O95398 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
RAPGEF3O95398 ELL2P3-201ENST00000457883 1602 ntBASIC6.19□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 93.9 ms