Protein–RNA interactions for Protein: O75643

SNRNP200, U5 small nuclear ribonucleoprotein 200 kDa helicase, humanhuman

Known RBP Predictions only

Length 2,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200O75643 DUTP6-201ENST00000425573 462 ntBASIC2.96□□□□□ -1.94
SNRNP200O75643 BX890604.2-201ENST00000427883 474 ntBASIC2.96□□□□□ -1.94
SNRNP200O75643 AC093156.1-201ENST00000440382 670 ntBASIC2.96□□□□□ -1.94
SNRNP200O75643 AC006539.3-201ENST00000454258 129 ntBASIC2.96□□□□□ -1.94
SNRNP200O75643 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC2.96□□□□□ -1.94
SNRNP200O75643 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC2.96□□□□□ -1.94
SNRNP200O75643 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC2.96□□□□□ -1.94
SNRNP200O75643 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC2.96□□□□□ -1.94
SNRNP200O75643 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC2.96□□□□□ -1.94
SNRNP200O75643 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC2.96□□□□□ -1.94
SNRNP200O75643 BNIP3P11-201ENST00000603878 563 ntBASIC2.96□□□□□ -1.94
SNRNP200O75643 AP001002.2-201ENST00000625137 386 ntBASIC2.96□□□□□ -1.94
SNRNP200O75643 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
SNRNP200O75643 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
SNRNP200O75643 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC2.96□□□□□ -1.94
SNRNP200O75643 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
SNRNP200O75643 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC2.96□□□□□ -1.94
SNRNP200O75643 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC2.95□□□□□ -1.94
SNRNP200O75643 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC2.95□□□□□ -1.94
SNRNP200O75643 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC2.95□□□□□ -1.94
SNRNP200O75643 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC2.95□□□□□ -1.94
SNRNP200O75643 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
SNRNP200O75643 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
SNRNP200O75643 IDE-202ENST00000371581 4480 ntTSL 2 BASIC2.95□□□□□ -1.94
SNRNP200O75643 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC2.95□□□□□ -1.94
SNRNP200O75643 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC2.95□□□□□ -1.94
SNRNP200O75643 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
SNRNP200O75643 HSPB11-202ENST00000371376 765 ntTSL 3 BASIC2.95□□□□□ -1.94
SNRNP200O75643 TAF9BP1-201ENST00000396646 746 ntBASIC2.95□□□□□ -1.94
SNRNP200O75643 AL122016.1-201ENST00000403365 367 ntBASIC2.95□□□□□ -1.94
SNRNP200O75643 RNU6ATAC10P-201ENST00000408635 111 ntBASIC2.95□□□□□ -1.94
SNRNP200O75643 Z92545.1-201ENST00000411782 234 ntBASIC2.95□□□□□ -1.94
SNRNP200O75643 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC2.95□□□□□ -1.94
SNRNP200O75643 AL592148.1-201ENST00000413568 445 ntBASIC2.95□□□□□ -1.94
SNRNP200O75643 AC106901.1-201ENST00000425086 698 ntBASIC2.95□□□□□ -1.94
SNRNP200O75643 RPL35AP12-201ENST00000425362 338 ntBASIC2.95□□□□□ -1.94
SNRNP200O75643 HMGB3P11-201ENST00000440127 604 ntBASIC2.95□□□□□ -1.94
SNRNP200O75643 RN7SL442P-201ENST00000473804 320 ntBASIC2.95□□□□□ -1.94
SNRNP200O75643 TAF8-207ENST00000482432 556 ntTSL 2 BASIC2.95□□□□□ -1.94
SNRNP200O75643 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC2.95□□□□□ -1.94
SNRNP200O75643 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC2.95□□□□□ -1.94
SNRNP200O75643 KCTD9P6-201ENST00000522306 950 ntBASIC2.95□□□□□ -1.94
SNRNP200O75643 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC2.95□□□□□ -1.94
SNRNP200O75643 DUX4L52-201ENST00000549363 777 ntBASIC2.95□□□□□ -1.94
SNRNP200O75643 AL121603.1-201ENST00000553815 142 ntBASIC2.95□□□□□ -1.94
SNRNP200O75643 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC2.95□□□□□ -1.94
SNRNP200O75643 AP000919.1-202ENST00000581139 1264 ntBASIC2.95□□□□□ -1.94
SNRNP200O75643 IGKV1OR2-6-201ENST00000603485 277 ntBASIC2.95□□□□□ -1.94
SNRNP200O75643 AL162274.2-201ENST00000614406 332 ntBASIC2.95□□□□□ -1.94
SNRNP200O75643 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC2.95□□□□□ -1.94
SNRNP200O75643 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
SNRNP200O75643 MIR184-201ENST00000384962 84 ntBASIC2.95□□□□□ -1.94
SNRNP200O75643 U3.19-201ENST00000390893 196 ntBASIC2.95□□□□□ -1.94
SNRNP200O75643 SNORA48.5-201ENST00000391143 135 ntBASIC2.95□□□□□ -1.94
SNRNP200O75643 NCSTNP1-201ENST00000406229 144 ntBASIC2.95□□□□□ -1.94
SNRNP200O75643 UBE2V1P1-201ENST00000430836 445 ntBASIC2.95□□□□□ -1.94
SNRNP200O75643 AC105272.1-201ENST00000438604 198 ntBASIC2.95□□□□□ -1.94
SNRNP200O75643 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC2.95□□□□□ -1.94
SNRNP200O75643 MTND6P5-201ENST00000448266 512 ntBASIC2.95□□□□□ -1.94
SNRNP200O75643 IFNWP4-201ENST00000453148 294 ntBASIC2.95□□□□□ -1.94
SNRNP200O75643 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.95□□□□□ -1.94
SNRNP200O75643 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC2.95□□□□□ -1.94
SNRNP200O75643 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC2.95□□□□□ -1.94
SNRNP200O75643 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC2.95□□□□□ -1.94
SNRNP200O75643 U7.8-201ENST00000619968 63 ntBASIC2.95□□□□□ -1.94
SNRNP200O75643 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC2.94□□□□□ -1.94
SNRNP200O75643 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
SNRNP200O75643 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC2.94□□□□□ -1.94
SNRNP200O75643 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
SNRNP200O75643 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC2.94□□□□□ -1.94
SNRNP200O75643 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
SNRNP200O75643 AL049555.1-201ENST00000562834 1933 ntBASIC2.94□□□□□ -1.94
SNRNP200O75643 SNORA71.1-201ENST00000364523 117 ntBASIC2.94□□□□□ -1.94
SNRNP200O75643 RPL32P35-201ENST00000415214 394 ntBASIC2.94□□□□□ -1.94
SNRNP200O75643 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC2.94□□□□□ -1.94
SNRNP200O75643 OR6K4P-201ENST00000423179 955 ntBASIC2.94□□□□□ -1.94
SNRNP200O75643 AC013410.1-201ENST00000436223 1232 ntBASIC2.94□□□□□ -1.94
SNRNP200O75643 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.94□□□□□ -1.94
SNRNP200O75643 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC2.94□□□□□ -1.94
SNRNP200O75643 OR4C2P-201ENST00000530855 1064 ntBASIC2.94□□□□□ -1.94
SNRNP200O75643 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC2.94□□□□□ -1.94
SNRNP200O75643 BANCR-201ENST00000624238 473 ntTSL 2 BASIC2.94□□□□□ -1.94
SNRNP200O75643 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC2.94□□□□□ -1.94
SNRNP200O75643 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC2.94□□□□□ -1.94
SNRNP200O75643 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC2.94□□□□□ -1.94
SNRNP200O75643 MTND4P10-201ENST00000446199 1363 ntBASIC2.94□□□□□ -1.94
SNRNP200O75643 AL365361.1-201ENST00000566942 3481 ntBASIC2.93□□□□□ -1.94
SNRNP200O75643 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
SNRNP200O75643 RNA5SP293-201ENST00000410527 113 ntBASIC2.93□□□□□ -1.94
SNRNP200O75643 RPS29P2-201ENST00000479278 136 ntBASIC2.93□□□□□ -1.94
SNRNP200O75643 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC2.93□□□□□ -1.94
SNRNP200O75643 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC2.93□□□□□ -1.94
SNRNP200O75643 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC2.93□□□□□ -1.94
SNRNP200O75643 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC2.93□□□□□ -1.94
SNRNP200O75643 AL159169.2-201ENST00000610061 1269 ntBASIC2.93□□□□□ -1.94
SNRNP200O75643 AC008121.2-201ENST00000614647 523 ntBASIC2.93□□□□□ -1.94
SNRNP200O75643 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC2.93□□□□□ -1.94
SNRNP200O75643 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
SNRNP200O75643 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC2.93□□□□□ -1.94
SNRNP200O75643 UBA52P6-201ENST00000399822 382 ntBASIC2.93□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 117.6 ms