Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
LDB2O43679 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC4.33□□□□□ -1.72
LDB2O43679 AL512646.1-201ENST00000269395 1077 ntBASIC4.33□□□□□ -1.72
LDB2O43679 Y_RNA.201-201ENST00000364052 96 ntBASIC4.33□□□□□ -1.72
LDB2O43679 RNA5SP175-201ENST00000364275 119 ntBASIC4.33□□□□□ -1.72
LDB2O43679 RNU6-1200P-201ENST00000384162 107 ntBASIC4.33□□□□□ -1.72
LDB2O43679 RNU6-1300P-201ENST00000391046 108 ntBASIC4.33□□□□□ -1.72
LDB2O43679 AL021407.1-201ENST00000404531 386 ntBASIC4.33□□□□□ -1.72
LDB2O43679 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC4.33□□□□□ -1.72
LDB2O43679 TRBV24OR9-2-201ENST00000416632 435 ntBASIC4.33□□□□□ -1.72
LDB2O43679 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC4.33□□□□□ -1.72
LDB2O43679 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC4.33□□□□□ -1.72
LDB2O43679 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC4.33□□□□□ -1.72
LDB2O43679 RPL12P34-201ENST00000424532 479 ntBASIC4.33□□□□□ -1.72
LDB2O43679 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC4.33□□□□□ -1.72
LDB2O43679 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC4.33□□□□□ -1.72
LDB2O43679 ELOCP8-201ENST00000439309 332 ntBASIC4.33□□□□□ -1.72
LDB2O43679 ELOCP15-201ENST00000442090 332 ntBASIC4.33□□□□□ -1.72
LDB2O43679 TPMTP4-201ENST00000450749 678 ntBASIC4.33□□□□□ -1.72
LDB2O43679 MTND1P16-201ENST00000465177 898 ntBASIC4.33□□□□□ -1.72
LDB2O43679 FTH1P2-201ENST00000466086 412 ntBASIC4.33□□□□□ -1.72
LDB2O43679 MTND4LP3-201ENST00000468320 276 ntBASIC4.33□□□□□ -1.72
LDB2O43679 RPL30P6-201ENST00000475925 342 ntBASIC4.33□□□□□ -1.72
LDB2O43679 AC068587.1-201ENST00000483613 781 ntBASIC4.33□□□□□ -1.72
LDB2O43679 NIP7P2-201ENST00000485801 544 ntBASIC4.33□□□□□ -1.72
LDB2O43679 RN7SL810P-201ENST00000493031 276 ntBASIC4.33□□□□□ -1.72
LDB2O43679 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
LDB2O43679 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC4.33□□□□□ -1.72
LDB2O43679 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC4.33□□□□□ -1.72
LDB2O43679 Y_RNA.655-201ENST00000515919 96 ntBASIC4.33□□□□□ -1.72
LDB2O43679 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC4.33□□□□□ -1.72
LDB2O43679 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC4.33□□□□□ -1.72
LDB2O43679 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC4.33□□□□□ -1.72
LDB2O43679 AC004217.3-201ENST00000551552 878 ntBASIC4.33□□□□□ -1.72
LDB2O43679 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.33□□□□□ -1.72
LDB2O43679 AC124068.1-201ENST00000563131 678 ntBASIC4.33□□□□□ -1.72
LDB2O43679 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC4.33□□□□□ -1.72
LDB2O43679 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC4.33□□□□□ -1.72
LDB2O43679 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC4.33□□□□□ -1.72
LDB2O43679 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC4.33□□□□□ -1.72
LDB2O43679 AC005191.1-201ENST00000603950 358 ntBASIC4.33□□□□□ -1.72
LDB2O43679 CLPTM1LP1-201ENST00000604519 484 ntBASIC4.33□□□□□ -1.72
LDB2O43679 AC135507.1-201ENST00000607214 561 ntBASIC4.33□□□□□ -1.72
LDB2O43679 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.33□□□□□ -1.72
LDB2O43679 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC4.33□□□□□ -1.72
LDB2O43679 MIR6830-201ENST00000636015 70 ntBASIC4.33□□□□□ -1.72
LDB2O43679 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC4.33□□□□□ -1.72
LDB2O43679 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
LDB2O43679 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
LDB2O43679 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
LDB2O43679 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.33□□□□□ -1.72
LDB2O43679 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.33□□□□□ -1.72
LDB2O43679 AP000756.2-201ENST00000624168 2567 ntBASIC4.33□□□□□ -1.72
LDB2O43679 AC093535.2-201ENST00000624769 2326 ntBASIC4.33□□□□□ -1.72
LDB2O43679 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
LDB2O43679 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
LDB2O43679 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.32□□□□□ -1.72
LDB2O43679 NRK-204ENST00000540278 1687 ntTSL 2 BASIC4.32□□□□□ -1.72
LDB2O43679 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
LDB2O43679 SCN1A-220ENST00000641603 12506 ntBASIC4.32□□□□□ -1.72
LDB2O43679 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
LDB2O43679 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC4.32□□□□□ -1.72
LDB2O43679 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
LDB2O43679 RNU5D-1-201ENST00000363299 116 ntBASIC4.32□□□□□ -1.72
LDB2O43679 SNORA70.2-201ENST00000364506 135 ntBASIC4.32□□□□□ -1.72
LDB2O43679 Y_RNA.311-201ENST00000365068 96 ntBASIC4.32□□□□□ -1.72
LDB2O43679 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC4.32□□□□□ -1.72
LDB2O43679 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
LDB2O43679 AC068538.1-201ENST00000376856 336 ntBASIC4.32□□□□□ -1.72
LDB2O43679 MOB4-205ENST00000409916 829 ntTSL 3 BASIC4.32□□□□□ -1.72
LDB2O43679 RNU4-25P-201ENST00000410569 230 ntBASIC4.32□□□□□ -1.72
LDB2O43679 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC4.32□□□□□ -1.72
LDB2O43679 AC004690.1-201ENST00000418216 328 ntBASIC4.32□□□□□ -1.72
LDB2O43679 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC4.32□□□□□ -1.72
LDB2O43679 AL592293.2-201ENST00000422292 996 ntBASIC4.32□□□□□ -1.72
LDB2O43679 AC099336.2-201ENST00000422457 254 ntBASIC4.32□□□□□ -1.72
LDB2O43679 CHIAP3-201ENST00000423668 1133 ntBASIC4.32□□□□□ -1.72
LDB2O43679 RPS26P47-201ENST00000427219 348 ntBASIC4.32□□□□□ -1.72
LDB2O43679 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC4.32□□□□□ -1.72
LDB2O43679 ARL6IP1P2-201ENST00000431356 563 ntBASIC4.32□□□□□ -1.72
LDB2O43679 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC4.32□□□□□ -1.72
LDB2O43679 AL050321.1-201ENST00000432363 400 ntBASIC4.32□□□□□ -1.72
LDB2O43679 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC4.32□□□□□ -1.72
LDB2O43679 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC4.32□□□□□ -1.72
LDB2O43679 CBX1P1-201ENST00000440184 427 ntBASIC4.32□□□□□ -1.72
LDB2O43679 GEMIN8P3-201ENST00000445417 720 ntBASIC4.32□□□□□ -1.72
LDB2O43679 PHBP16-201ENST00000446318 950 ntBASIC4.32□□□□□ -1.72
LDB2O43679 AC099560.2-201ENST00000457554 255 ntBASIC4.32□□□□□ -1.72
LDB2O43679 AC011276.1-201ENST00000469688 323 ntBASIC4.32□□□□□ -1.72
LDB2O43679 RPS26P28-201ENST00000470806 348 ntBASIC4.32□□□□□ -1.72
LDB2O43679 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC4.32□□□□□ -1.72
LDB2O43679 AC104164.2-201ENST00000496953 495 ntBASIC4.32□□□□□ -1.72
LDB2O43679 AC083829.1-201ENST00000503756 657 ntBASIC4.32□□□□□ -1.72
LDB2O43679 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC4.32□□□□□ -1.72
LDB2O43679 STMN1P2-201ENST00000508435 439 ntBASIC4.32□□□□□ -1.72
LDB2O43679 AC109471.1-201ENST00000511631 612 ntBASIC4.32□□□□□ -1.72
LDB2O43679 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC4.32□□□□□ -1.72
LDB2O43679 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC4.32□□□□□ -1.72
LDB2O43679 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC4.32□□□□□ -1.72
LDB2O43679 HIGD1AP6-201ENST00000521833 279 ntBASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms