Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 AL035404.1-201ENST00000497982 568 ntBASIC2.77□□□□□ -1.97
SDCBPO00560 AC026403.1-201ENST00000518938 295 ntBASIC2.77□□□□□ -1.97
SDCBPO00560 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC2.77□□□□□ -1.97
SDCBPO00560 OR5B10P-201ENST00000532869 642 ntBASIC2.77□□□□□ -1.97
SDCBPO00560 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC2.77□□□□□ -1.97
SDCBPO00560 TRAV37-201ENST00000553906 342 ntBASIC2.77□□□□□ -1.97
SDCBPO00560 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
SDCBPO00560 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC2.77□□□□□ -1.97
SDCBPO00560 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC2.77□□□□□ -1.97
SDCBPO00560 AC006130.2-201ENST00000586202 326 ntBASIC2.77□□□□□ -1.97
SDCBPO00560 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC2.77□□□□□ -1.97
SDCBPO00560 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC2.77□□□□□ -1.97
SDCBPO00560 AC084373.1-201ENST00000603311 235 ntBASIC2.77□□□□□ -1.97
SDCBPO00560 MESTIT1_2.1-201ENST00000616328 235 ntBASIC2.77□□□□□ -1.97
SDCBPO00560 uc_338.9-201ENST00000617424 182 ntBASIC2.77□□□□□ -1.97
SDCBPO00560 SNORD39.4-201ENST00000620099 78 ntBASIC2.77□□□□□ -1.97
SDCBPO00560 AC039056.2-201ENST00000622261 511 ntBASIC2.77□□□□□ -1.97
SDCBPO00560 AC091903.1-201ENST00000624322 454 ntBASIC2.77□□□□□ -1.97
SDCBPO00560 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC2.77□□□□□ -1.97
SDCBPO00560 AC244258.1-201ENST00000637553 1071 ntBASIC2.77□□□□□ -1.97
SDCBPO00560 HSPA8P19-201ENST00000505359 1517 ntBASIC2.77□□□□□ -1.97
SDCBPO00560 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.77□□□□□ -1.97
SDCBPO00560 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC2.77□□□□□ -1.97
SDCBPO00560 AC000367.1-201ENST00000452711 1766 ntBASIC2.77□□□□□ -1.97
SDCBPO00560 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
SDCBPO00560 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
SDCBPO00560 RNU1-70P-201ENST00000362618 164 ntBASIC2.76□□□□□ -1.97
SDCBPO00560 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC2.76□□□□□ -1.97
SDCBPO00560 RN7SKP111-201ENST00000410349 271 ntBASIC2.76□□□□□ -1.97
SDCBPO00560 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC2.76□□□□□ -1.97
SDCBPO00560 AC012065.2-201ENST00000421295 375 ntBASIC2.76□□□□□ -1.97
SDCBPO00560 AC092832.1-201ENST00000422934 400 ntBASIC2.76□□□□□ -1.97
SDCBPO00560 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC2.76□□□□□ -1.97
SDCBPO00560 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC2.76□□□□□ -1.97
SDCBPO00560 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC2.76□□□□□ -1.97
SDCBPO00560 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC2.76□□□□□ -1.97
SDCBPO00560 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC2.76□□□□□ -1.97
SDCBPO00560 MTCYBP31-201ENST00000438855 1122 ntBASIC2.76□□□□□ -1.97
SDCBPO00560 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC2.76□□□□□ -1.97
SDCBPO00560 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC2.76□□□□□ -1.97
SDCBPO00560 RBMY2UP-201ENST00000453474 324 ntBASIC2.76□□□□□ -1.97
SDCBPO00560 AC021205.1-201ENST00000468797 348 ntBASIC2.76□□□□□ -1.97
SDCBPO00560 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC2.76□□□□□ -1.97
SDCBPO00560 KATNBL1P4-201ENST00000503545 918 ntBASIC2.76□□□□□ -1.97
SDCBPO00560 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
SDCBPO00560 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC2.76□□□□□ -1.97
SDCBPO00560 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC2.76□□□□□ -1.97
SDCBPO00560 HMGN1P15-201ENST00000513870 295 ntBASIC2.76□□□□□ -1.97
SDCBPO00560 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC2.76□□□□□ -1.97
SDCBPO00560 RNA5SP380-201ENST00000517190 98 ntBASIC2.76□□□□□ -1.97
SDCBPO00560 IGKV2-26-201ENST00000518305 343 ntBASIC2.76□□□□□ -1.97
SDCBPO00560 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC2.76□□□□□ -1.97
SDCBPO00560 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC2.76□□□□□ -1.97
SDCBPO00560 HIGD1AP10-201ENST00000527837 282 ntBASIC2.76□□□□□ -1.97
SDCBPO00560 UBE2NP1-201ENST00000545592 458 ntBASIC2.76□□□□□ -1.97
SDCBPO00560 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC2.76□□□□□ -1.97
SDCBPO00560 AC005476.1-201ENST00000554427 397 ntBASIC2.76□□□□□ -1.97
SDCBPO00560 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC2.76□□□□□ -1.97
SDCBPO00560 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC2.76□□□□□ -1.97
SDCBPO00560 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC2.76□□□□□ -1.97
SDCBPO00560 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC2.76□□□□□ -1.97
SDCBPO00560 AP001180.3-201ENST00000582221 145 ntBASIC2.76□□□□□ -1.97
SDCBPO00560 AC067852.4-201ENST00000590314 478 ntBASIC2.76□□□□□ -1.97
SDCBPO00560 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC2.76□□□□□ -1.97
SDCBPO00560 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC2.76□□□□□ -1.97
SDCBPO00560 U3.45-201ENST00000607547 219 ntBASIC2.76□□□□□ -1.97
SDCBPO00560 AL356321.1-201ENST00000621360 228 ntBASIC2.76□□□□□ -1.97
SDCBPO00560 AP003072.4-201ENST00000624580 310 ntBASIC2.76□□□□□ -1.97
SDCBPO00560 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC2.76□□□□□ -1.97
SDCBPO00560 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC2.76□□□□□ -1.97
SDCBPO00560 AC127502.3-201ENST00000636170 1206 ntBASIC2.76□□□□□ -1.97
SDCBPO00560 AL392088.2-201ENST00000637607 285 ntBASIC2.76□□□□□ -1.97
SDCBPO00560 MTND5P27-201ENST00000428871 1720 ntBASIC2.76□□□□□ -1.97
SDCBPO00560 SYT14P1-202ENST00000600441 1448 ntBASIC2.76□□□□□ -1.97
SDCBPO00560 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
SDCBPO00560 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC2.76□□□□□ -1.97
SDCBPO00560 USP8P1-201ENST00000494673 3183 ntBASIC2.75□□□□□ -1.97
SDCBPO00560 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC2.75□□□□□ -1.97
SDCBPO00560 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
SDCBPO00560 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC2.75□□□□□ -1.97
SDCBPO00560 MTND5P24-201ENST00000438892 1767 ntBASIC2.75□□□□□ -1.97
SDCBPO00560 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
SDCBPO00560 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
SDCBPO00560 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC2.75□□□□□ -1.97
SDCBPO00560 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
SDCBPO00560 U3.6-201ENST00000363622 211 ntBASIC2.75□□□□□ -1.97
SDCBPO00560 RNA5SP50-201ENST00000363731 107 ntBASIC2.75□□□□□ -1.97
SDCBPO00560 MIR124-3-201ENST00000384866 87 ntBASIC2.75□□□□□ -1.97
SDCBPO00560 MIR200C-201ENST00000384980 68 ntBASIC2.75□□□□□ -1.97
SDCBPO00560 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
SDCBPO00560 PTMAP2-201ENST00000397627 327 ntBASIC2.75□□□□□ -1.97
SDCBPO00560 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC2.75□□□□□ -1.97
SDCBPO00560 GOT2P5-201ENST00000433995 546 ntBASIC2.75□□□□□ -1.97
SDCBPO00560 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC2.75□□□□□ -1.97
SDCBPO00560 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC2.75□□□□□ -1.97
SDCBPO00560 MORF4L1P4-201ENST00000450245 976 ntBASIC2.75□□□□□ -1.97
SDCBPO00560 RPL26P28-201ENST00000451325 435 ntBASIC2.75□□□□□ -1.97
SDCBPO00560 AP000873.1-201ENST00000463987 400 ntBASIC2.75□□□□□ -1.97
SDCBPO00560 TAF8-207ENST00000482432 556 ntTSL 2 BASIC2.75□□□□□ -1.97
SDCBPO00560 AL133372.1-201ENST00000493565 745 ntBASIC2.75□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 135.4 ms