Protein–RNA interactions for Protein: A6NFA1

TRABD2B, Metalloprotease TIKI2, humanhuman

Predictions only

Length 517 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRABD2BA6NFA1 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC3.79□□□□□ -1.8
TRABD2BA6NFA1 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC3.79□□□□□ -1.8
TRABD2BA6NFA1 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC3.79□□□□□ -1.8
TRABD2BA6NFA1 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC3.79□□□□□ -1.8
TRABD2BA6NFA1 AC068135.1-201ENST00000446164 246 ntBASIC3.79□□□□□ -1.8
TRABD2BA6NFA1 GXYLT1P1-201ENST00000446657 490 ntBASIC3.79□□□□□ -1.8
TRABD2BA6NFA1 AL096803.2-201ENST00000450032 677 ntBASIC3.79□□□□□ -1.8
TRABD2BA6NFA1 EIF4A1P11-201ENST00000451239 222 ntBASIC3.79□□□□□ -1.8
TRABD2BA6NFA1 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
TRABD2BA6NFA1 AL035404.1-201ENST00000497982 568 ntBASIC3.79□□□□□ -1.8
TRABD2BA6NFA1 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC3.79□□□□□ -1.8
TRABD2BA6NFA1 AC025554.1-201ENST00000505641 188 ntBASIC3.79□□□□□ -1.8
TRABD2BA6NFA1 KRT19P6-201ENST00000510983 209 ntBASIC3.79□□□□□ -1.8
TRABD2BA6NFA1 IGHVIII-38-1-201ENST00000521454 282 ntBASIC3.79□□□□□ -1.8
TRABD2BA6NFA1 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC3.79□□□□□ -1.8
TRABD2BA6NFA1 AC104115.2-201ENST00000523026 687 ntBASIC3.79□□□□□ -1.8
TRABD2BA6NFA1 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC3.79□□□□□ -1.8
TRABD2BA6NFA1 POLR2KP1-201ENST00000553226 168 ntBASIC3.79□□□□□ -1.8
TRABD2BA6NFA1 AGGF1P8-201ENST00000562979 1000 ntBASIC3.79□□□□□ -1.8
TRABD2BA6NFA1 AC023825.1-201ENST00000566704 1030 ntBASIC3.79□□□□□ -1.8
TRABD2BA6NFA1 AC106782.4-201ENST00000568264 210 ntBASIC3.79□□□□□ -1.8
TRABD2BA6NFA1 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC3.79□□□□□ -1.8
TRABD2BA6NFA1 MTND4LP24-201ENST00000572277 291 ntBASIC3.79□□□□□ -1.8
TRABD2BA6NFA1 AC090666.1-201ENST00000578241 445 ntBASIC3.79□□□□□ -1.8
TRABD2BA6NFA1 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC3.79□□□□□ -1.8
TRABD2BA6NFA1 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC3.79□□□□□ -1.8
TRABD2BA6NFA1 AC096586.1-201ENST00000610267 561 ntBASIC3.79□□□□□ -1.8
TRABD2BA6NFA1 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC3.79□□□□□ -1.8
TRABD2BA6NFA1 AC116447.1-201ENST00000613153 453 ntBASIC3.79□□□□□ -1.8
TRABD2BA6NFA1 AC008759.3-201ENST00000613300 508 ntBASIC3.79□□□□□ -1.8
TRABD2BA6NFA1 AC018926.1-201ENST00000616335 435 ntBASIC3.79□□□□□ -1.8
TRABD2BA6NFA1 AC138907.10-201ENST00000623708 983 ntBASIC3.79□□□□□ -1.8
TRABD2BA6NFA1 AC116563.2-201ENST00000624751 535 ntBASIC3.79□□□□□ -1.8
TRABD2BA6NFA1 SCARNA15.3-201ENST00000626315 122 ntBASIC3.79□□□□□ -1.8
TRABD2BA6NFA1 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC3.79□□□□□ -1.8
TRABD2BA6NFA1 SCARNA4.1-201ENST00000628597 123 ntBASIC3.79□□□□□ -1.8
TRABD2BA6NFA1 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.79□□□□□ -1.8
TRABD2BA6NFA1 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
TRABD2BA6NFA1 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC3.78□□□□□ -1.8
TRABD2BA6NFA1 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
TRABD2BA6NFA1 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
TRABD2BA6NFA1 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.78□□□□□ -1.8
TRABD2BA6NFA1 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC3.78□□□□□ -1.8
TRABD2BA6NFA1 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.78□□□□□ -1.8
TRABD2BA6NFA1 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
TRABD2BA6NFA1 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC3.78□□□□□ -1.8
TRABD2BA6NFA1 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
TRABD2BA6NFA1 Z98941.1-201ENST00000407764 100 ntBASIC3.78□□□□□ -1.8
TRABD2BA6NFA1 MIR1303-201ENST00000408625 86 ntBASIC3.78□□□□□ -1.8
TRABD2BA6NFA1 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC3.78□□□□□ -1.8
TRABD2BA6NFA1 Z97055.1-201ENST00000419730 712 ntBASIC3.78□□□□□ -1.8
TRABD2BA6NFA1 AL139247.1-201ENST00000422768 325 ntBASIC3.78□□□□□ -1.8
TRABD2BA6NFA1 AC013262.1-201ENST00000426710 252 ntBASIC3.78□□□□□ -1.8
TRABD2BA6NFA1 AC093422.3-201ENST00000428506 305 ntBASIC3.78□□□□□ -1.8
TRABD2BA6NFA1 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC3.78□□□□□ -1.8
TRABD2BA6NFA1 AL031663.1-201ENST00000437445 219 ntBASIC3.78□□□□□ -1.8
TRABD2BA6NFA1 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
TRABD2BA6NFA1 AC092013.1-201ENST00000438795 332 ntBASIC3.78□□□□□ -1.8
TRABD2BA6NFA1 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC3.78□□□□□ -1.8
TRABD2BA6NFA1 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
TRABD2BA6NFA1 GTF2IP12-201ENST00000456547 356 ntBASIC3.78□□□□□ -1.8
TRABD2BA6NFA1 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC3.78□□□□□ -1.8
TRABD2BA6NFA1 RPS29P2-201ENST00000479278 136 ntBASIC3.78□□□□□ -1.8
TRABD2BA6NFA1 AC006517.1-201ENST00000480485 328 ntBASIC3.78□□□□□ -1.8
TRABD2BA6NFA1 AC104687.1-201ENST00000485829 412 ntBASIC3.78□□□□□ -1.8
TRABD2BA6NFA1 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
TRABD2BA6NFA1 BNIP3P41-201ENST00000503774 571 ntBASIC3.78□□□□□ -1.8
TRABD2BA6NFA1 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC3.78□□□□□ -1.8
TRABD2BA6NFA1 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.78□□□□□ -1.8
TRABD2BA6NFA1 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.78□□□□□ -1.8
TRABD2BA6NFA1 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC3.78□□□□□ -1.8
TRABD2BA6NFA1 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC3.78□□□□□ -1.8
TRABD2BA6NFA1 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.78□□□□□ -1.8
TRABD2BA6NFA1 AC027104.1-201ENST00000563702 681 ntBASIC3.78□□□□□ -1.8
TRABD2BA6NFA1 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.78□□□□□ -1.8
TRABD2BA6NFA1 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.78□□□□□ -1.8
TRABD2BA6NFA1 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC3.78□□□□□ -1.8
TRABD2BA6NFA1 AP003117.1-201ENST00000602771 554 ntBASIC3.78□□□□□ -1.8
TRABD2BA6NFA1 AC017076.1-201ENST00000607613 578 ntBASIC3.78□□□□□ -1.8
TRABD2BA6NFA1 AC006946.3-201ENST00000609791 756 ntBASIC3.78□□□□□ -1.8
TRABD2BA6NFA1 AC090246.1-201ENST00000616499 426 ntBASIC3.78□□□□□ -1.8
TRABD2BA6NFA1 STMN1P1-201ENST00000617809 440 ntBASIC3.78□□□□□ -1.8
TRABD2BA6NFA1 U6.48-201ENST00000618523 106 ntBASIC3.78□□□□□ -1.8
TRABD2BA6NFA1 AC007275.1-201ENST00000621243 671 ntBASIC3.78□□□□□ -1.8
TRABD2BA6NFA1 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.78□□□□□ -1.8
TRABD2BA6NFA1 SPATA31D2P-201ENST00000429999 4388 ntBASIC3.78□□□□□ -1.8
TRABD2BA6NFA1 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
TRABD2BA6NFA1 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
TRABD2BA6NFA1 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
TRABD2BA6NFA1 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
TRABD2BA6NFA1 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
TRABD2BA6NFA1 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.78□□□□□ -1.8
TRABD2BA6NFA1 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
TRABD2BA6NFA1 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC3.78□□□□□ -1.8
TRABD2BA6NFA1 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC3.78□□□□□ -1.81
TRABD2BA6NFA1 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
TRABD2BA6NFA1 PRO1804-201ENST00000623780 2050 ntBASIC3.77□□□□□ -1.81
TRABD2BA6NFA1 ERCC6-202ENST00000374127 1782 ntBASIC3.77□□□□□ -1.81
TRABD2BA6NFA1 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC3.77□□□□□ -1.81
TRABD2BA6NFA1 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 90.6 ms