Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.34□□□□□ -1.87
RHBDD3Q9Y3P4 AL136164.4-201ENST00000625013 2135 ntBASIC3.34□□□□□ -1.87
RHBDD3Q9Y3P4 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
RHBDD3Q9Y3P4 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
RHBDD3Q9Y3P4 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.34□□□□□ -1.87
RHBDD3Q9Y3P4 MIR199A2-201ENST00000385289 110 ntBASIC3.34□□□□□ -1.87
RHBDD3Q9Y3P4 RNU6-837P-201ENST00000391056 108 ntBASIC3.34□□□□□ -1.87
RHBDD3Q9Y3P4 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
RHBDD3Q9Y3P4 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC3.34□□□□□ -1.87
RHBDD3Q9Y3P4 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
RHBDD3Q9Y3P4 DSTNP4-201ENST00000399472 474 ntBASIC3.34□□□□□ -1.87
RHBDD3Q9Y3P4 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC3.34□□□□□ -1.87
RHBDD3Q9Y3P4 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC3.34□□□□□ -1.87
RHBDD3Q9Y3P4 ZNF736P2Y-201ENST00000416040 1279 ntBASIC3.34□□□□□ -1.87
RHBDD3Q9Y3P4 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC3.34□□□□□ -1.87
RHBDD3Q9Y3P4 Z97055.1-201ENST00000419730 712 ntBASIC3.34□□□□□ -1.87
RHBDD3Q9Y3P4 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC3.34□□□□□ -1.87
RHBDD3Q9Y3P4 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC3.34□□□□□ -1.87
RHBDD3Q9Y3P4 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC3.34□□□□□ -1.87
RHBDD3Q9Y3P4 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC3.34□□□□□ -1.87
RHBDD3Q9Y3P4 SKP1P1-201ENST00000438081 489 ntBASIC3.34□□□□□ -1.87
RHBDD3Q9Y3P4 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC3.34□□□□□ -1.87
RHBDD3Q9Y3P4 AL034418.1-201ENST00000448675 860 ntBASIC3.34□□□□□ -1.87
RHBDD3Q9Y3P4 RPL23AP15-201ENST00000450202 459 ntBASIC3.34□□□□□ -1.87
RHBDD3Q9Y3P4 RPL21P11-201ENST00000461458 483 ntBASIC3.34□□□□□ -1.87
RHBDD3Q9Y3P4 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
RHBDD3Q9Y3P4 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC3.34□□□□□ -1.87
RHBDD3Q9Y3P4 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC3.34□□□□□ -1.87
RHBDD3Q9Y3P4 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC3.34□□□□□ -1.87
RHBDD3Q9Y3P4 SYF2P1-201ENST00000550658 413 ntBASIC3.34□□□□□ -1.87
RHBDD3Q9Y3P4 AL121576.1-201ENST00000556055 276 ntBASIC3.34□□□□□ -1.87
RHBDD3Q9Y3P4 AC067805.1-201ENST00000559344 470 ntBASIC3.34□□□□□ -1.87
RHBDD3Q9Y3P4 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC3.34□□□□□ -1.87
RHBDD3Q9Y3P4 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC3.34□□□□□ -1.87
RHBDD3Q9Y3P4 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC3.34□□□□□ -1.87
RHBDD3Q9Y3P4 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC3.34□□□□□ -1.87
RHBDD3Q9Y3P4 IGKV1OR2-118-201ENST00000603238 347 ntBASIC3.34□□□□□ -1.87
RHBDD3Q9Y3P4 AC091488.1-201ENST00000604239 660 ntBASIC3.34□□□□□ -1.87
RHBDD3Q9Y3P4 BRDTP1-201ENST00000605735 677 ntBASIC3.34□□□□□ -1.87
RHBDD3Q9Y3P4 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC3.34□□□□□ -1.87
RHBDD3Q9Y3P4 MIR8058-201ENST00000615737 89 ntBASIC3.34□□□□□ -1.87
RHBDD3Q9Y3P4 AC079684.1-201ENST00000621405 437 ntBASIC3.34□□□□□ -1.87
RHBDD3Q9Y3P4 PLCE1P1-201ENST00000622094 305 ntBASIC3.34□□□□□ -1.87
RHBDD3Q9Y3P4 AC073530.2-201ENST00000623987 261 ntBASIC3.34□□□□□ -1.87
RHBDD3Q9Y3P4 AC091905.1-201ENST00000624400 311 ntBASIC3.34□□□□□ -1.87
RHBDD3Q9Y3P4 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
RHBDD3Q9Y3P4 SEC63P2-201ENST00000503863 1939 ntBASIC3.34□□□□□ -1.88
RHBDD3Q9Y3P4 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.34□□□□□ -1.88
RHBDD3Q9Y3P4 AL672296.1-201ENST00000427780 2158 ntBASIC3.34□□□□□ -1.88
RHBDD3Q9Y3P4 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC3.33□□□□□ -1.88
RHBDD3Q9Y3P4 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
RHBDD3Q9Y3P4 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
RHBDD3Q9Y3P4 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
RHBDD3Q9Y3P4 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
RHBDD3Q9Y3P4 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
RHBDD3Q9Y3P4 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
RHBDD3Q9Y3P4 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.33□□□□□ -1.88
RHBDD3Q9Y3P4 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC3.33□□□□□ -1.88
RHBDD3Q9Y3P4 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC3.33□□□□□ -1.88
RHBDD3Q9Y3P4 AC068538.1-201ENST00000376856 336 ntBASIC3.33□□□□□ -1.88
RHBDD3Q9Y3P4 TANK-206ENST00000406287 875 ntTSL 5 BASIC3.33□□□□□ -1.88
RHBDD3Q9Y3P4 RHEBP3-201ENST00000411920 351 ntBASIC3.33□□□□□ -1.88
RHBDD3Q9Y3P4 TCEA1P2-201ENST00000420496 906 ntBASIC3.33□□□□□ -1.88
RHBDD3Q9Y3P4 COX6CP17-201ENST00000421389 185 ntBASIC3.33□□□□□ -1.88
RHBDD3Q9Y3P4 AL513174.1-201ENST00000423182 629 ntBASIC3.33□□□□□ -1.88
RHBDD3Q9Y3P4 MTND4P24-201ENST00000424002 397 ntBASIC3.33□□□□□ -1.88
RHBDD3Q9Y3P4 AL365396.1-201ENST00000430854 671 ntBASIC3.33□□□□□ -1.88
RHBDD3Q9Y3P4 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.33□□□□□ -1.88
RHBDD3Q9Y3P4 MTCO1P43-201ENST00000431831 488 ntBASIC3.33□□□□□ -1.88
RHBDD3Q9Y3P4 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.33□□□□□ -1.88
RHBDD3Q9Y3P4 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC3.33□□□□□ -1.88
RHBDD3Q9Y3P4 MTCYBP31-201ENST00000438855 1122 ntBASIC3.33□□□□□ -1.88
RHBDD3Q9Y3P4 AC114878.1-201ENST00000441166 358 ntBASIC3.33□□□□□ -1.88
RHBDD3Q9Y3P4 AC114755.5-201ENST00000447760 831 ntBASIC3.33□□□□□ -1.88
RHBDD3Q9Y3P4 RPL7P52-201ENST00000449200 742 ntBASIC3.33□□□□□ -1.88
RHBDD3Q9Y3P4 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC3.33□□□□□ -1.88
RHBDD3Q9Y3P4 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC3.33□□□□□ -1.88
RHBDD3Q9Y3P4 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.33□□□□□ -1.88
RHBDD3Q9Y3P4 RPL23AP55-201ENST00000498163 452 ntBASIC3.33□□□□□ -1.88
RHBDD3Q9Y3P4 HMGB3P15-201ENST00000507326 574 ntBASIC3.33□□□□□ -1.88
RHBDD3Q9Y3P4 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC3.33□□□□□ -1.88
RHBDD3Q9Y3P4 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC3.33□□□□□ -1.88
RHBDD3Q9Y3P4 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.33□□□□□ -1.88
RHBDD3Q9Y3P4 RNU6-488P-201ENST00000515918 99 ntBASIC3.33□□□□□ -1.88
RHBDD3Q9Y3P4 AP004371.1-201ENST00000525240 214 ntBASIC3.33□□□□□ -1.88
RHBDD3Q9Y3P4 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.33□□□□□ -1.88
RHBDD3Q9Y3P4 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.33□□□□□ -1.88
RHBDD3Q9Y3P4 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC3.33□□□□□ -1.88
RHBDD3Q9Y3P4 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC3.33□□□□□ -1.88
RHBDD3Q9Y3P4 AC120057.2-201ENST00000571520 271 ntBASIC3.33□□□□□ -1.88
RHBDD3Q9Y3P4 MIR4504-201ENST00000577413 92 ntBASIC3.33□□□□□ -1.88
RHBDD3Q9Y3P4 MIR5047-201ENST00000579212 100 ntBASIC3.33□□□□□ -1.88
RHBDD3Q9Y3P4 AC017100.2-201ENST00000584628 355 ntBASIC3.33□□□□□ -1.88
RHBDD3Q9Y3P4 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.33□□□□□ -1.88
RHBDD3Q9Y3P4 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC3.33□□□□□ -1.88
RHBDD3Q9Y3P4 AC006254.3-201ENST00000603353 884 ntBASIC3.33□□□□□ -1.88
RHBDD3Q9Y3P4 AL034351.1-201ENST00000605288 668 ntBASIC3.33□□□□□ -1.88
RHBDD3Q9Y3P4 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC3.33□□□□□ -1.88
RHBDD3Q9Y3P4 MIR6500-201ENST00000622700 86 ntBASIC3.33□□□□□ -1.88
RHBDD3Q9Y3P4 MTND4P8-201ENST00000514997 1362 ntBASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms