Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
SHANK2Q9UPX8 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC4.76□□□□□ -1.65
SHANK2Q9UPX8 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.76□□□□□ -1.65
SHANK2Q9UPX8 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC4.75□□□□□ -1.65
SHANK2Q9UPX8 FTLP19-201ENST00000433300 394 ntBASIC4.75□□□□□ -1.65
SHANK2Q9UPX8 AC069540.1-201ENST00000446320 988 ntBASIC4.75□□□□□ -1.65
SHANK2Q9UPX8 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC4.75□□□□□ -1.65
SHANK2Q9UPX8 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC4.75□□□□□ -1.65
SHANK2Q9UPX8 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
SHANK2Q9UPX8 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC4.75□□□□□ -1.65
SHANK2Q9UPX8 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
SHANK2Q9UPX8 Z93242.1-201ENST00000427102 353 ntBASIC4.75□□□□□ -1.65
SHANK2Q9UPX8 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
SHANK2Q9UPX8 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC4.75□□□□□ -1.65
SHANK2Q9UPX8 AC009948.4-201ENST00000604692 675 ntBASIC4.75□□□□□ -1.65
SHANK2Q9UPX8 AC099654.11-201ENST00000638857 294 ntBASIC4.75□□□□□ -1.65
SHANK2Q9UPX8 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
SHANK2Q9UPX8 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
SHANK2Q9UPX8 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
SHANK2Q9UPX8 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC4.74□□□□□ -1.65
SHANK2Q9UPX8 USP33-201ENST00000357428 4155 ntTSL 5 BASIC4.74□□□□□ -1.65
SHANK2Q9UPX8 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC4.74□□□□□ -1.65
SHANK2Q9UPX8 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
SHANK2Q9UPX8 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC4.74□□□□□ -1.65
SHANK2Q9UPX8 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC4.74□□□□□ -1.65
SHANK2Q9UPX8 AC073069.1-201ENST00000428657 441 ntBASIC4.74□□□□□ -1.65
SHANK2Q9UPX8 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC4.74□□□□□ -1.65
SHANK2Q9UPX8 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC4.74□□□□□ -1.65
SHANK2Q9UPX8 SLC31A1P1-201ENST00000451221 567 ntBASIC4.74□□□□□ -1.65
SHANK2Q9UPX8 AC068724.1-201ENST00000487100 792 ntBASIC4.74□□□□□ -1.65
SHANK2Q9UPX8 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
SHANK2Q9UPX8 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC4.74□□□□□ -1.65
SHANK2Q9UPX8 NRBF2P5-201ENST00000603087 788 ntBASIC4.74□□□□□ -1.65
SHANK2Q9UPX8 RPL23AP92-201ENST00000603609 255 ntBASIC4.74□□□□□ -1.65
SHANK2Q9UPX8 AC018690.1-201ENST00000608144 626 ntBASIC4.74□□□□□ -1.65
SHANK2Q9UPX8 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC4.74□□□□□ -1.65
SHANK2Q9UPX8 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
SHANK2Q9UPX8 THAP12P8-201ENST00000447914 2115 ntBASIC4.74□□□□□ -1.65
SHANK2Q9UPX8 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
SHANK2Q9UPX8 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
SHANK2Q9UPX8 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.73□□□□□ -1.65
SHANK2Q9UPX8 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC4.73□□□□□ -1.65
SHANK2Q9UPX8 AC138393.1-206ENST00000540997 1886 ntBASIC4.73□□□□□ -1.65
SHANK2Q9UPX8 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC4.73□□□□□ -1.65
SHANK2Q9UPX8 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
SHANK2Q9UPX8 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
SHANK2Q9UPX8 RNA5SP31-201ENST00000411144 127 ntBASIC4.73□□□□□ -1.65
SHANK2Q9UPX8 AC002524.1-201ENST00000411687 547 ntBASIC4.73□□□□□ -1.65
SHANK2Q9UPX8 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC4.73□□□□□ -1.65
SHANK2Q9UPX8 KRTAP19-11P-201ENST00000439851 104 ntBASIC4.73□□□□□ -1.65
SHANK2Q9UPX8 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC4.73□□□□□ -1.65
SHANK2Q9UPX8 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC4.73□□□□□ -1.65
SHANK2Q9UPX8 RPS6P4-201ENST00000494693 758 ntBASIC4.73□□□□□ -1.65
SHANK2Q9UPX8 MIR2276-201ENST00000516886 89 ntBASIC4.73□□□□□ -1.65
SHANK2Q9UPX8 LYZ-203ENST00000549690 669 ntTSL 2 BASIC4.73□□□□□ -1.65
SHANK2Q9UPX8 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC4.73□□□□□ -1.65
SHANK2Q9UPX8 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC4.73□□□□□ -1.65
SHANK2Q9UPX8 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC4.73□□□□□ -1.65
SHANK2Q9UPX8 IGHVIII-44-202ENST00000636235 289 ntBASIC4.73□□□□□ -1.65
SHANK2Q9UPX8 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC4.73□□□□□ -1.65
SHANK2Q9UPX8 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
SHANK2Q9UPX8 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
SHANK2Q9UPX8 AC007390.2-201ENST00000606229 3803 ntBASIC4.73□□□□□ -1.65
SHANK2Q9UPX8 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
SHANK2Q9UPX8 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
SHANK2Q9UPX8 AC007496.3-201ENST00000624987 3443 ntBASIC4.72□□□□□ -1.65
SHANK2Q9UPX8 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
SHANK2Q9UPX8 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.72□□□□□ -1.65
SHANK2Q9UPX8 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
SHANK2Q9UPX8 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC4.72□□□□□ -1.65
SHANK2Q9UPX8 AC016696.1-201ENST00000446949 318 ntBASIC4.72□□□□□ -1.65
SHANK2Q9UPX8 AC133473.1-201ENST00000455173 299 ntBASIC4.72□□□□□ -1.65
SHANK2Q9UPX8 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC4.72□□□□□ -1.65
SHANK2Q9UPX8 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC4.72□□□□□ -1.65
SHANK2Q9UPX8 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC4.72□□□□□ -1.65
SHANK2Q9UPX8 AC091544.4-201ENST00000555268 342 ntBASIC4.72□□□□□ -1.65
SHANK2Q9UPX8 AC067852.4-201ENST00000590314 478 ntBASIC4.72□□□□□ -1.65
SHANK2Q9UPX8 uc_338.1-201ENST00000612113 180 ntBASIC4.72□□□□□ -1.65
SHANK2Q9UPX8 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
SHANK2Q9UPX8 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
SHANK2Q9UPX8 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
SHANK2Q9UPX8 OR5BR1P-201ENST00000524992 1330 ntBASIC4.72□□□□□ -1.65
SHANK2Q9UPX8 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC4.72□□□□□ -1.65
SHANK2Q9UPX8 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC4.72□□□□□ -1.65
SHANK2Q9UPX8 AC096644.4-201ENST00000563417 2912 ntBASIC4.71□□□□□ -1.65
SHANK2Q9UPX8 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.65
SHANK2Q9UPX8 RNU6-55P-201ENST00000411092 107 ntBASIC4.71□□□□□ -1.66
SHANK2Q9UPX8 RNU6-954P-201ENST00000411355 107 ntBASIC4.71□□□□□ -1.66
SHANK2Q9UPX8 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.71□□□□□ -1.66
SHANK2Q9UPX8 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC4.71□□□□□ -1.66
SHANK2Q9UPX8 AL591623.2-201ENST00000449978 222 ntBASIC4.71□□□□□ -1.66
SHANK2Q9UPX8 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC4.71□□□□□ -1.66
SHANK2Q9UPX8 MIR4769-201ENST00000584126 77 ntBASIC4.71□□□□□ -1.66
SHANK2Q9UPX8 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.71□□□□□ -1.66
SHANK2Q9UPX8 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC4.71□□□□□ -1.66
SHANK2Q9UPX8 AC087241.4-201ENST00000612441 480 ntBASIC4.71□□□□□ -1.66
SHANK2Q9UPX8 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.71□□□□□ -1.66
SHANK2Q9UPX8 AC010149.2-201ENST00000637608 315 ntBASIC4.71□□□□□ -1.66
SHANK2Q9UPX8 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
SHANK2Q9UPX8 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC4.71□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 88.1 ms