Protein–RNA interactions for Protein: Q9P035

HACD3, Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HACD3Q9P035 SAGE2P-201ENST00000420011 2126 ntBASIC4.03□□□□□ -1.76
HACD3Q9P035 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC4.03□□□□□ -1.77
HACD3Q9P035 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.77
HACD3Q9P035 MTCO1P6-201ENST00000481192 1384 ntBASIC4.02□□□□□ -1.77
HACD3Q9P035 LINC00561-201ENST00000565815 2738 ntBASIC4.02□□□□□ -1.77
HACD3Q9P035 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
HACD3Q9P035 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
HACD3Q9P035 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC4.02□□□□□ -1.77
HACD3Q9P035 RNU6-236P-201ENST00000363886 106 ntBASIC4.02□□□□□ -1.77
HACD3Q9P035 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC4.02□□□□□ -1.77
HACD3Q9P035 OR8G2P-201ENST00000412796 908 ntBASIC4.02□□□□□ -1.77
HACD3Q9P035 TAF13P2-201ENST00000416876 286 ntBASIC4.02□□□□□ -1.77
HACD3Q9P035 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC4.02□□□□□ -1.77
HACD3Q9P035 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC4.02□□□□□ -1.77
HACD3Q9P035 TRAPPC2P9-201ENST00000434556 343 ntBASIC4.02□□□□□ -1.77
HACD3Q9P035 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC4.02□□□□□ -1.77
HACD3Q9P035 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC4.02□□□□□ -1.77
HACD3Q9P035 ELOCP11-201ENST00000436690 332 ntBASIC4.02□□□□□ -1.77
HACD3Q9P035 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.02□□□□□ -1.77
HACD3Q9P035 ELOCP16-201ENST00000444494 332 ntBASIC4.02□□□□□ -1.77
HACD3Q9P035 RPL5P32-201ENST00000454085 879 ntBASIC4.02□□□□□ -1.77
HACD3Q9P035 AC010307.1-201ENST00000467206 836 ntBASIC4.02□□□□□ -1.77
HACD3Q9P035 GTF2IP9-201ENST00000502460 301 ntBASIC4.02□□□□□ -1.77
HACD3Q9P035 FTH1P24-201ENST00000503502 462 ntBASIC4.02□□□□□ -1.77
HACD3Q9P035 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC4.02□□□□□ -1.77
HACD3Q9P035 MTATP6P22-201ENST00000507369 598 ntBASIC4.02□□□□□ -1.77
HACD3Q9P035 AC010342.1-201ENST00000514047 877 ntBASIC4.02□□□□□ -1.77
HACD3Q9P035 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC4.02□□□□□ -1.77
HACD3Q9P035 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
HACD3Q9P035 RNU6-276P-201ENST00000516114 96 ntBASIC4.02□□□□□ -1.77
HACD3Q9P035 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.02□□□□□ -1.77
HACD3Q9P035 AC008562.1-201ENST00000521763 330 ntBASIC4.02□□□□□ -1.77
HACD3Q9P035 AC022790.1-201ENST00000522872 204 ntBASIC4.02□□□□□ -1.77
HACD3Q9P035 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
HACD3Q9P035 AC139103.1-201ENST00000534696 1030 ntBASIC4.02□□□□□ -1.77
HACD3Q9P035 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC4.02□□□□□ -1.77
HACD3Q9P035 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC4.02□□□□□ -1.77
HACD3Q9P035 AC087897.1-201ENST00000550134 156 ntBASIC4.02□□□□□ -1.77
HACD3Q9P035 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC4.02□□□□□ -1.77
HACD3Q9P035 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
HACD3Q9P035 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
HACD3Q9P035 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC4.02□□□□□ -1.77
HACD3Q9P035 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC4.02□□□□□ -1.77
HACD3Q9P035 MTCO1P40-201ENST00000574371 625 ntBASIC4.02□□□□□ -1.77
HACD3Q9P035 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC4.02□□□□□ -1.77
HACD3Q9P035 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC4.02□□□□□ -1.77
HACD3Q9P035 NTAN1P1-201ENST00000603150 646 ntBASIC4.02□□□□□ -1.77
HACD3Q9P035 AC027449.1-201ENST00000608890 407 ntBASIC4.02□□□□□ -1.77
HACD3Q9P035 AP000255.1-201ENST00000610276 676 ntBASIC4.02□□□□□ -1.77
HACD3Q9P035 CYCSP41-201ENST00000616920 296 ntBASIC4.02□□□□□ -1.77
HACD3Q9P035 AC023510.2-201ENST00000622162 746 ntBASIC4.02□□□□□ -1.77
HACD3Q9P035 PDCD6IPP1-202ENST00000622242 1064 ntBASIC4.02□□□□□ -1.77
HACD3Q9P035 AC017104.5-201ENST00000637647 639 ntBASIC4.02□□□□□ -1.77
HACD3Q9P035 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC4.02□□□□□ -1.77
HACD3Q9P035 BX649567.1-201ENST00000642071 1134 ntBASIC4.02□□□□□ -1.77
HACD3Q9P035 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
HACD3Q9P035 NCAPGP1-201ENST00000505112 1814 ntBASIC4.02□□□□□ -1.77
HACD3Q9P035 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
HACD3Q9P035 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
HACD3Q9P035 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.02□□□□□ -1.77
HACD3Q9P035 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4.02□□□□□ -1.77
HACD3Q9P035 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
HACD3Q9P035 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
HACD3Q9P035 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC4.01□□□□□ -1.77
HACD3Q9P035 UBE2Q2P1-202ENST00000354771 883 ntBASIC4.01□□□□□ -1.77
HACD3Q9P035 SNORA72.3-201ENST00000365074 132 ntBASIC4.01□□□□□ -1.77
HACD3Q9P035 RPL7P27-201ENST00000403775 720 ntBASIC4.01□□□□□ -1.77
HACD3Q9P035 Z98941.1-201ENST00000407764 100 ntBASIC4.01□□□□□ -1.77
HACD3Q9P035 AC234782.4-201ENST00000417646 1048 ntBASIC4.01□□□□□ -1.77
HACD3Q9P035 AC106883.1-201ENST00000418805 562 ntBASIC4.01□□□□□ -1.77
HACD3Q9P035 RPS12P23-201ENST00000419579 400 ntBASIC4.01□□□□□ -1.77
HACD3Q9P035 SLC4A1APP1-201ENST00000419995 602 ntBASIC4.01□□□□□ -1.77
HACD3Q9P035 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC4.01□□□□□ -1.77
HACD3Q9P035 MTCO2P23-201ENST00000425216 680 ntBASIC4.01□□□□□ -1.77
HACD3Q9P035 AC092634.2-201ENST00000428146 1010 ntBASIC4.01□□□□□ -1.77
HACD3Q9P035 IFNNP1-201ENST00000429219 553 ntBASIC4.01□□□□□ -1.77
HACD3Q9P035 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC4.01□□□□□ -1.77
HACD3Q9P035 AC002542.1-201ENST00000440683 193 ntBASIC4.01□□□□□ -1.77
HACD3Q9P035 VN1R25P-201ENST00000443385 738 ntBASIC4.01□□□□□ -1.77
HACD3Q9P035 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC4.01□□□□□ -1.77
HACD3Q9P035 MRPL35P4-201ENST00000453682 566 ntBASIC4.01□□□□□ -1.77
HACD3Q9P035 AC244505.3-201ENST00000454598 187 ntBASIC4.01□□□□□ -1.77
HACD3Q9P035 VN1R40P-201ENST00000455196 941 ntBASIC4.01□□□□□ -1.77
HACD3Q9P035 RPL37P3-201ENST00000456825 293 ntBASIC4.01□□□□□ -1.77
HACD3Q9P035 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC4.01□□□□□ -1.77
HACD3Q9P035 TRAV31-201ENST00000502780 342 ntBASIC4.01□□□□□ -1.77
HACD3Q9P035 UBE2V1P12-201ENST00000503954 474 ntBASIC4.01□□□□□ -1.77
HACD3Q9P035 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC4.01□□□□□ -1.77
HACD3Q9P035 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC4.01□□□□□ -1.77
HACD3Q9P035 USP9YP5-201ENST00000511770 630 ntBASIC4.01□□□□□ -1.77
HACD3Q9P035 AC093752.1-206ENST00000511823 336 ntBASIC4.01□□□□□ -1.77
HACD3Q9P035 AC119751.1-201ENST00000513357 765 ntBASIC4.01□□□□□ -1.77
HACD3Q9P035 RNA5SP143-201ENST00000516936 115 ntBASIC4.01□□□□□ -1.77
HACD3Q9P035 RN7SKP283-201ENST00000517197 270 ntBASIC4.01□□□□□ -1.77
HACD3Q9P035 AC091163.3-201ENST00000518269 1144 ntBASIC4.01□□□□□ -1.77
HACD3Q9P035 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC4.01□□□□□ -1.77
HACD3Q9P035 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC4.01□□□□□ -1.77
HACD3Q9P035 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC4.01□□□□□ -1.77
HACD3Q9P035 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC4.01□□□□□ -1.77
HACD3Q9P035 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms