Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 IL31RA-202ENST00000354961 2658 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
CUEDC1Q9NWM3 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC6.3□□□□□ -1.4
CUEDC1Q9NWM3 ADH1B-205ENST00000625860 4059 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CUEDC1Q9NWM3 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC6.29□□□□□ -1.4
CUEDC1Q9NWM3 AC025809.2-201ENST00000625085 1802 ntBASIC6.29□□□□□ -1.4
CUEDC1Q9NWM3 RAB9B-201ENST00000243298 3748 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
CUEDC1Q9NWM3 NCOR1-204ENST00000395851 7950 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
CUEDC1Q9NWM3 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC6.29□□□□□ -1.4
CUEDC1Q9NWM3 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
CUEDC1Q9NWM3 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
CUEDC1Q9NWM3 AC005592.1-201ENST00000566527 1640 ntBASIC6.29□□□□□ -1.4
CUEDC1Q9NWM3 CDC27P3-201ENST00000635418 1910 ntBASIC6.29□□□□□ -1.4
CUEDC1Q9NWM3 ZBTB8B-201ENST00000609129 12834 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
CUEDC1Q9NWM3 ZNF211-205ENST00000391703 2239 ntTSL 2 BASIC6.29□□□□□ -1.4
CUEDC1Q9NWM3 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC6.29□□□□□ -1.4
CUEDC1Q9NWM3 ZMYM2-210ENST00000610343 10200 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
CUEDC1Q9NWM3 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC6.29□□□□□ -1.4
CUEDC1Q9NWM3 AL139276.1-201ENST00000311910 1001 ntBASIC6.29□□□□□ -1.4
CUEDC1Q9NWM3 RNA5SP433-201ENST00000364491 114 ntBASIC6.29□□□□□ -1.4
CUEDC1Q9NWM3 AL360182.1-201ENST00000397433 468 ntBASIC6.29□□□□□ -1.4
CUEDC1Q9NWM3 OR6E1P-201ENST00000414424 923 ntBASIC6.29□□□□□ -1.4
CUEDC1Q9NWM3 RPL12P46-201ENST00000436610 195 ntBASIC6.29□□□□□ -1.4
CUEDC1Q9NWM3 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC6.29□□□□□ -1.4
CUEDC1Q9NWM3 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC6.29□□□□□ -1.4
CUEDC1Q9NWM3 AL121871.1-201ENST00000443413 436 ntBASIC6.29□□□□□ -1.4
CUEDC1Q9NWM3 HMGN1P2-201ENST00000445197 310 ntBASIC6.29□□□□□ -1.4
CUEDC1Q9NWM3 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC6.29□□□□□ -1.4
CUEDC1Q9NWM3 MTND1P17-201ENST00000448961 204 ntBASIC6.29□□□□□ -1.4
CUEDC1Q9NWM3 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC6.29□□□□□ -1.4
CUEDC1Q9NWM3 AP1S2P1-201ENST00000457344 379 ntBASIC6.29□□□□□ -1.4
CUEDC1Q9NWM3 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC6.29□□□□□ -1.4
CUEDC1Q9NWM3 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
CUEDC1Q9NWM3 ALDH7A1P3-201ENST00000492517 345 ntBASIC6.29□□□□□ -1.4
CUEDC1Q9NWM3 GZMAP1-201ENST00000503054 631 ntBASIC6.29□□□□□ -1.4
CUEDC1Q9NWM3 FTH1P24-201ENST00000503502 462 ntBASIC6.29□□□□□ -1.4
CUEDC1Q9NWM3 AC010350.1-201ENST00000504908 231 ntBASIC6.29□□□□□ -1.4
CUEDC1Q9NWM3 AC113367.2-201ENST00000505749 160 ntBASIC6.29□□□□□ -1.4
CUEDC1Q9NWM3 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC6.29□□□□□ -1.4
CUEDC1Q9NWM3 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC6.29□□□□□ -1.4
CUEDC1Q9NWM3 MYL12AP1-201ENST00000518490 515 ntBASIC6.29□□□□□ -1.4
CUEDC1Q9NWM3 AC022360.1-201ENST00000521058 340 ntBASIC6.29□□□□□ -1.4
CUEDC1Q9NWM3 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC6.29□□□□□ -1.4
CUEDC1Q9NWM3 AC084121.1-201ENST00000533882 835 ntBASIC6.29□□□□□ -1.4
CUEDC1Q9NWM3 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC6.29□□□□□ -1.4
CUEDC1Q9NWM3 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC6.29□□□□□ -1.4
CUEDC1Q9NWM3 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC6.29□□□□□ -1.4
CUEDC1Q9NWM3 AC124068.1-201ENST00000563131 678 ntBASIC6.29□□□□□ -1.4
CUEDC1Q9NWM3 RN7SL208P-201ENST00000577964 296 ntBASIC6.29□□□□□ -1.4
CUEDC1Q9NWM3 AC105224.1-201ENST00000587055 421 ntBASIC6.29□□□□□ -1.4
CUEDC1Q9NWM3 BNIP3P25-201ENST00000596023 559 ntBASIC6.29□□□□□ -1.4
CUEDC1Q9NWM3 AC011626.1-201ENST00000604710 562 ntBASIC6.29□□□□□ -1.4
CUEDC1Q9NWM3 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC6.29□□□□□ -1.4
CUEDC1Q9NWM3 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC6.29□□□□□ -1.4
CUEDC1Q9NWM3 U1.41-201ENST00000617626 165 ntBASIC6.29□□□□□ -1.4
CUEDC1Q9NWM3 MIR8062-201ENST00000621515 85 ntBASIC6.29□□□□□ -1.4
CUEDC1Q9NWM3 AC089999.3-201ENST00000622440 577 ntBASIC6.29□□□□□ -1.4
CUEDC1Q9NWM3 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC6.29□□□□□ -1.4
CUEDC1Q9NWM3 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
CUEDC1Q9NWM3 AC092125.1-201ENST00000562568 1995 ntBASIC6.29□□□□□ -1.4
CUEDC1Q9NWM3 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
CUEDC1Q9NWM3 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
CUEDC1Q9NWM3 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC6.29□□□□□ -1.4
CUEDC1Q9NWM3 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
CUEDC1Q9NWM3 PRLR-216ENST00000542609 1764 ntTSL 5 BASIC6.29□□□□□ -1.4
CUEDC1Q9NWM3 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC6.29□□□□□ -1.4
CUEDC1Q9NWM3 ATP5A1P4-201ENST00000556888 1605 ntBASIC6.28□□□□□ -1.4
CUEDC1Q9NWM3 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
CUEDC1Q9NWM3 THUMPD3P1-201ENST00000506556 1480 ntBASIC6.28□□□□□ -1.4
CUEDC1Q9NWM3 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
CUEDC1Q9NWM3 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
CUEDC1Q9NWM3 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
CUEDC1Q9NWM3 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
CUEDC1Q9NWM3 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC6.28□□□□□ -1.4
CUEDC1Q9NWM3 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC6.28□□□□□ -1.4
CUEDC1Q9NWM3 AC022905.1-201ENST00000503430 3048 ntBASIC6.28□□□□□ -1.4
CUEDC1Q9NWM3 RNU6-552P-201ENST00000362869 119 ntBASIC6.28□□□□□ -1.4
CUEDC1Q9NWM3 Y_RNA.152-201ENST00000363578 100 ntBASIC6.28□□□□□ -1.4
CUEDC1Q9NWM3 Y_RNA.367-201ENST00000365544 101 ntBASIC6.28□□□□□ -1.4
CUEDC1Q9NWM3 MRPS6P2-201ENST00000381143 370 ntBASIC6.28□□□□□ -1.4
CUEDC1Q9NWM3 Y_RNA.389-201ENST00000383924 113 ntBASIC6.28□□□□□ -1.4
CUEDC1Q9NWM3 Y_RNA.396-201ENST00000383949 103 ntBASIC6.28□□□□□ -1.4
CUEDC1Q9NWM3 MIR454-201ENST00000390180 115 ntBASIC6.28□□□□□ -1.4
CUEDC1Q9NWM3 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
CUEDC1Q9NWM3 Y_RNA.645-201ENST00000391229 102 ntBASIC6.28□□□□□ -1.4
CUEDC1Q9NWM3 RNU6-903P-201ENST00000391270 109 ntBASIC6.28□□□□□ -1.4
CUEDC1Q9NWM3 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
CUEDC1Q9NWM3 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC6.28□□□□□ -1.4
CUEDC1Q9NWM3 PGBD4P6-201ENST00000421501 610 ntBASIC6.28□□□□□ -1.4
CUEDC1Q9NWM3 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC6.28□□□□□ -1.4
CUEDC1Q9NWM3 AC105402.2-201ENST00000438503 358 ntBASIC6.28□□□□□ -1.4
CUEDC1Q9NWM3 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC6.28□□□□□ -1.4
CUEDC1Q9NWM3 MED28P3-201ENST00000444288 531 ntBASIC6.28□□□□□ -1.4
CUEDC1Q9NWM3 PPIAP20-201ENST00000449839 135 ntBASIC6.28□□□□□ -1.4
CUEDC1Q9NWM3 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC6.28□□□□□ -1.4
CUEDC1Q9NWM3 AC094085.1-201ENST00000468914 584 ntBASIC6.28□□□□□ -1.4
CUEDC1Q9NWM3 AC128716.1-201ENST00000475129 166 ntBASIC6.28□□□□□ -1.4
CUEDC1Q9NWM3 MED28P2-201ENST00000475771 317 ntBASIC6.28□□□□□ -1.4
CUEDC1Q9NWM3 RPL38P3-201ENST00000484463 213 ntBASIC6.28□□□□□ -1.4
CUEDC1Q9NWM3 AK3P4-201ENST00000504283 583 ntBASIC6.28□□□□□ -1.4
CUEDC1Q9NWM3 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 73.9 ms