Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC4.65□□□□□ -1.67
AMBRA1Q9C0C7 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC4.65□□□□□ -1.67
AMBRA1Q9C0C7 AC095031.1-201ENST00000623685 672 ntBASIC4.65□□□□□ -1.67
AMBRA1Q9C0C7 AL672167.1-203ENST00000641299 2975 ntBASIC4.65□□□□□ -1.67
AMBRA1Q9C0C7 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
AMBRA1Q9C0C7 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
AMBRA1Q9C0C7 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
AMBRA1Q9C0C7 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
AMBRA1Q9C0C7 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.67
AMBRA1Q9C0C7 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC4.65□□□□□ -1.67
AMBRA1Q9C0C7 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC4.65□□□□□ -1.67
AMBRA1Q9C0C7 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
AMBRA1Q9C0C7 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
AMBRA1Q9C0C7 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
AMBRA1Q9C0C7 USP9YP4-201ENST00000424401 1745 ntBASIC4.64□□□□□ -1.67
AMBRA1Q9C0C7 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
AMBRA1Q9C0C7 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
AMBRA1Q9C0C7 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
AMBRA1Q9C0C7 RNA5SP305-201ENST00000362665 119 ntBASIC4.64□□□□□ -1.67
AMBRA1Q9C0C7 RNU5E-5P-201ENST00000365379 116 ntBASIC4.64□□□□□ -1.67
AMBRA1Q9C0C7 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
AMBRA1Q9C0C7 RNU6-444P-201ENST00000383988 108 ntBASIC4.64□□□□□ -1.67
AMBRA1Q9C0C7 PRELID3BP11-201ENST00000414230 479 ntBASIC4.64□□□□□ -1.67
AMBRA1Q9C0C7 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC4.64□□□□□ -1.67
AMBRA1Q9C0C7 AC008280.1-201ENST00000418851 412 ntBASIC4.64□□□□□ -1.67
AMBRA1Q9C0C7 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC4.64□□□□□ -1.67
AMBRA1Q9C0C7 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.64□□□□□ -1.67
AMBRA1Q9C0C7 RPS27AP14-201ENST00000422868 454 ntBASIC4.64□□□□□ -1.67
AMBRA1Q9C0C7 EIF4HP2-201ENST00000424380 563 ntBASIC4.64□□□□□ -1.67
AMBRA1Q9C0C7 AL158073.1-201ENST00000426848 1104 ntBASIC4.64□□□□□ -1.67
AMBRA1Q9C0C7 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC4.64□□□□□ -1.67
AMBRA1Q9C0C7 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC4.64□□□□□ -1.67
AMBRA1Q9C0C7 ZDHHC20P1-204ENST00000435787 423 ntBASIC4.64□□□□□ -1.67
AMBRA1Q9C0C7 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC4.64□□□□□ -1.67
AMBRA1Q9C0C7 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC4.64□□□□□ -1.67
AMBRA1Q9C0C7 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC4.64□□□□□ -1.67
AMBRA1Q9C0C7 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC4.64□□□□□ -1.67
AMBRA1Q9C0C7 MTCO1P48-201ENST00000448024 1096 ntBASIC4.64□□□□□ -1.67
AMBRA1Q9C0C7 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC4.64□□□□□ -1.67
AMBRA1Q9C0C7 AL389915.2-201ENST00000454576 441 ntBASIC4.64□□□□□ -1.67
AMBRA1Q9C0C7 SNORD42A-201ENST00000459584 64 ntBASIC4.64□□□□□ -1.67
AMBRA1Q9C0C7 RPS7P7-201ENST00000463499 571 ntBASIC4.64□□□□□ -1.67
AMBRA1Q9C0C7 AC010301.1-201ENST00000473936 355 ntBASIC4.64□□□□□ -1.67
AMBRA1Q9C0C7 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC4.64□□□□□ -1.67
AMBRA1Q9C0C7 AC007686.1-201ENST00000488511 463 ntBASIC4.64□□□□□ -1.67
AMBRA1Q9C0C7 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC4.64□□□□□ -1.67
AMBRA1Q9C0C7 AP000790.1-201ENST00000528891 737 ntBASIC4.64□□□□□ -1.67
AMBRA1Q9C0C7 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
AMBRA1Q9C0C7 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC4.64□□□□□ -1.67
AMBRA1Q9C0C7 AP002453.2-201ENST00000533503 320 ntBASIC4.64□□□□□ -1.67
AMBRA1Q9C0C7 AC024940.3-201ENST00000538551 316 ntBASIC4.64□□□□□ -1.67
AMBRA1Q9C0C7 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC4.64□□□□□ -1.67
AMBRA1Q9C0C7 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC4.64□□□□□ -1.67
AMBRA1Q9C0C7 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC4.64□□□□□ -1.67
AMBRA1Q9C0C7 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC4.64□□□□□ -1.67
AMBRA1Q9C0C7 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC4.64□□□□□ -1.67
AMBRA1Q9C0C7 AC018552.1-201ENST00000562099 811 ntBASIC4.64□□□□□ -1.67
AMBRA1Q9C0C7 AC009063.1-201ENST00000563342 702 ntBASIC4.64□□□□□ -1.67
AMBRA1Q9C0C7 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC4.64□□□□□ -1.67
AMBRA1Q9C0C7 SNORD39.3-201ENST00000584451 71 ntBASIC4.64□□□□□ -1.67
AMBRA1Q9C0C7 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC4.64□□□□□ -1.67
AMBRA1Q9C0C7 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC4.64□□□□□ -1.67
AMBRA1Q9C0C7 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC4.64□□□□□ -1.67
AMBRA1Q9C0C7 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC4.64□□□□□ -1.67
AMBRA1Q9C0C7 AC093765.1-201ENST00000603758 881 ntBASIC4.64□□□□□ -1.67
AMBRA1Q9C0C7 AP002360.4-201ENST00000606980 481 ntBASIC4.64□□□□□ -1.67
AMBRA1Q9C0C7 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
AMBRA1Q9C0C7 WWOX-217ENST00000620008 450 ntTSL 2 BASIC4.64□□□□□ -1.67
AMBRA1Q9C0C7 AC073534.2-201ENST00000620377 381 ntBASIC4.64□□□□□ -1.67
AMBRA1Q9C0C7 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC4.64□□□□□ -1.67
AMBRA1Q9C0C7 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC4.64□□□□□ -1.67
AMBRA1Q9C0C7 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC4.64□□□□□ -1.67
AMBRA1Q9C0C7 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.64□□□□□ -1.67
AMBRA1Q9C0C7 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.64□□□□□ -1.67
AMBRA1Q9C0C7 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
AMBRA1Q9C0C7 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
AMBRA1Q9C0C7 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC4.64□□□□□ -1.67
AMBRA1Q9C0C7 MAPK10-263ENST00000641052 4307 ntBASIC4.64□□□□□ -1.67
AMBRA1Q9C0C7 AC011493.1-201ENST00000596753 1632 ntBASIC4.64□□□□□ -1.67
AMBRA1Q9C0C7 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
AMBRA1Q9C0C7 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
AMBRA1Q9C0C7 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.64□□□□□ -1.67
AMBRA1Q9C0C7 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
AMBRA1Q9C0C7 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC4.64□□□□□ -1.67
AMBRA1Q9C0C7 OR4G11P-202ENST00000642116 1414 ntBASIC4.63□□□□□ -1.67
AMBRA1Q9C0C7 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
AMBRA1Q9C0C7 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC4.63□□□□□ -1.67
AMBRA1Q9C0C7 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
AMBRA1Q9C0C7 DHX9P1-201ENST00000436565 3076 ntBASIC4.63□□□□□ -1.67
AMBRA1Q9C0C7 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.63□□□□□ -1.67
AMBRA1Q9C0C7 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
AMBRA1Q9C0C7 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
AMBRA1Q9C0C7 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
AMBRA1Q9C0C7 SNORA17.1-201ENST00000362945 126 ntBASIC4.63□□□□□ -1.67
AMBRA1Q9C0C7 RNU6-657P-201ENST00000383904 107 ntBASIC4.63□□□□□ -1.67
AMBRA1Q9C0C7 SNORA66-201ENST00000384792 133 ntBASIC4.63□□□□□ -1.67
AMBRA1Q9C0C7 MIR92A2-201ENST00000385299 75 ntBASIC4.63□□□□□ -1.67
AMBRA1Q9C0C7 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
AMBRA1Q9C0C7 DUTP5-201ENST00000406790 469 ntBASIC4.63□□□□□ -1.67
AMBRA1Q9C0C7 VN1R8P-201ENST00000407739 893 ntBASIC4.63□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 90.4 ms