Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 AC025423.2-201ENST00000537570 439 ntBASIC3.65□□□□□ -1.83
TRIM4Q9C037 TGIF1P1-201ENST00000558095 802 ntBASIC3.65□□□□□ -1.83
TRIM4Q9C037 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC3.65□□□□□ -1.83
TRIM4Q9C037 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC3.65□□□□□ -1.83
TRIM4Q9C037 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.65□□□□□ -1.83
TRIM4Q9C037 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.83
TRIM4Q9C037 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC3.65□□□□□ -1.83
TRIM4Q9C037 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.65□□□□□ -1.83
TRIM4Q9C037 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
TRIM4Q9C037 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.65□□□□□ -1.83
TRIM4Q9C037 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
TRIM4Q9C037 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
TRIM4Q9C037 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.64□□□□□ -1.83
TRIM4Q9C037 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
TRIM4Q9C037 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
TRIM4Q9C037 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
TRIM4Q9C037 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
TRIM4Q9C037 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
TRIM4Q9C037 RNU6-805P-201ENST00000365643 106 ntBASIC3.64□□□□□ -1.83
TRIM4Q9C037 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC3.64□□□□□ -1.83
TRIM4Q9C037 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC3.64□□□□□ -1.83
TRIM4Q9C037 AP002088.1-201ENST00000382740 395 ntBASIC3.64□□□□□ -1.83
TRIM4Q9C037 RNU6-55P-201ENST00000411092 107 ntBASIC3.64□□□□□ -1.83
TRIM4Q9C037 RNU6-954P-201ENST00000411355 107 ntBASIC3.64□□□□□ -1.83
TRIM4Q9C037 RPS7P13-201ENST00000413955 498 ntBASIC3.64□□□□□ -1.83
TRIM4Q9C037 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
TRIM4Q9C037 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC3.64□□□□□ -1.83
TRIM4Q9C037 AC073069.1-201ENST00000428657 441 ntBASIC3.64□□□□□ -1.83
TRIM4Q9C037 AC006994.1-201ENST00000438212 839 ntBASIC3.64□□□□□ -1.83
TRIM4Q9C037 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC3.64□□□□□ -1.83
TRIM4Q9C037 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC3.64□□□□□ -1.83
TRIM4Q9C037 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC3.64□□□□□ -1.83
TRIM4Q9C037 VN1R96P-201ENST00000446052 858 ntBASIC3.64□□□□□ -1.83
TRIM4Q9C037 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC3.64□□□□□ -1.83
TRIM4Q9C037 FTH1P24-201ENST00000503502 462 ntBASIC3.64□□□□□ -1.83
TRIM4Q9C037 RNU6-347P-201ENST00000516658 105 ntBASIC3.64□□□□□ -1.83
TRIM4Q9C037 TBCA-203ENST00000517679 545 ntTSL 3 BASIC3.64□□□□□ -1.83
TRIM4Q9C037 OR5AP1P-201ENST00000529730 940 ntBASIC3.64□□□□□ -1.83
TRIM4Q9C037 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC3.64□□□□□ -1.83
TRIM4Q9C037 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.64□□□□□ -1.83
TRIM4Q9C037 AC068714.1-201ENST00000559623 800 ntBASIC3.64□□□□□ -1.83
TRIM4Q9C037 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC3.64□□□□□ -1.83
TRIM4Q9C037 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC3.64□□□□□ -1.83
TRIM4Q9C037 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.64□□□□□ -1.83
TRIM4Q9C037 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.64□□□□□ -1.83
TRIM4Q9C037 AC048347.1-201ENST00000624621 427 ntBASIC3.64□□□□□ -1.83
TRIM4Q9C037 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.64□□□□□ -1.83
TRIM4Q9C037 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
TRIM4Q9C037 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
TRIM4Q9C037 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
TRIM4Q9C037 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
TRIM4Q9C037 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
TRIM4Q9C037 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
TRIM4Q9C037 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
TRIM4Q9C037 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
TRIM4Q9C037 RNU6-283P-201ENST00000364788 107 ntBASIC3.63□□□□□ -1.83
TRIM4Q9C037 RNA5SP267-201ENST00000364893 126 ntBASIC3.63□□□□□ -1.83
TRIM4Q9C037 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC3.63□□□□□ -1.83
TRIM4Q9C037 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC3.63□□□□□ -1.83
TRIM4Q9C037 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC3.63□□□□□ -1.83
TRIM4Q9C037 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
TRIM4Q9C037 AL158156.1-201ENST00000422509 473 ntBASIC3.63□□□□□ -1.83
TRIM4Q9C037 TRIAP1P1-201ENST00000427062 225 ntBASIC3.63□□□□□ -1.83
TRIM4Q9C037 RPL23AP4-201ENST00000427757 463 ntBASIC3.63□□□□□ -1.83
TRIM4Q9C037 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.63□□□□□ -1.83
TRIM4Q9C037 AL831737.1-201ENST00000441288 271 ntBASIC3.63□□□□□ -1.83
TRIM4Q9C037 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
TRIM4Q9C037 AC125238.1-201ENST00000448842 249 ntBASIC3.63□□□□□ -1.83
TRIM4Q9C037 PTGES3P5-201ENST00000455109 434 ntBASIC3.63□□□□□ -1.83
TRIM4Q9C037 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC3.63□□□□□ -1.83
TRIM4Q9C037 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC3.63□□□□□ -1.83
TRIM4Q9C037 TRBV12-2-201ENST00000489763 344 ntBASIC3.63□□□□□ -1.83
TRIM4Q9C037 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC3.63□□□□□ -1.83
TRIM4Q9C037 RAC1P2-201ENST00000511164 579 ntBASIC3.63□□□□□ -1.83
TRIM4Q9C037 RNA5SP208-201ENST00000516156 78 ntBASIC3.63□□□□□ -1.83
TRIM4Q9C037 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC3.63□□□□□ -1.83
TRIM4Q9C037 AC007991.1-201ENST00000522680 631 ntBASIC3.63□□□□□ -1.83
TRIM4Q9C037 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC3.63□□□□□ -1.83
TRIM4Q9C037 NPM1P35-201ENST00000533043 868 ntBASIC3.63□□□□□ -1.83
TRIM4Q9C037 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.63□□□□□ -1.83
TRIM4Q9C037 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.63□□□□□ -1.83
TRIM4Q9C037 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.63□□□□□ -1.83
TRIM4Q9C037 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC3.63□□□□□ -1.83
TRIM4Q9C037 AC006270.2-201ENST00000578523 652 ntBASIC3.63□□□□□ -1.83
TRIM4Q9C037 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC3.63□□□□□ -1.83
TRIM4Q9C037 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.63□□□□□ -1.83
TRIM4Q9C037 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC3.63□□□□□ -1.83
TRIM4Q9C037 AP003072.5-201ENST00000623872 773 ntBASIC3.63□□□□□ -1.83
TRIM4Q9C037 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC3.63□□□□□ -1.83
TRIM4Q9C037 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
TRIM4Q9C037 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.63□□□□□ -1.83
TRIM4Q9C037 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
TRIM4Q9C037 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.62□□□□□ -1.83
TRIM4Q9C037 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.62□□□□□ -1.83
TRIM4Q9C037 MAPK10-362ENST00000641864 4484 ntBASIC3.62□□□□□ -1.83
TRIM4Q9C037 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC3.62□□□□□ -1.83
TRIM4Q9C037 MIR591-201ENST00000385290 95 ntBASIC3.62□□□□□ -1.83
TRIM4Q9C037 AC007066.1-201ENST00000392902 381 ntBASIC3.62□□□□□ -1.83
TRIM4Q9C037 SOD2P1-201ENST00000396543 562 ntBASIC3.62□□□□□ -1.83
TRIM4Q9C037 RNA5SP293-201ENST00000410527 113 ntBASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 107.8 ms