Protein–RNA interactions for Protein: Q9BY43

CHMP4A, Charged multivesicular body protein 4a, humanhuman

Predictions only

Length 222 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4AQ9BY43 AC099522.1-202ENST00000514718 367 ntBASIC5.51□□□□□ -1.53
CHMP4AQ9BY43 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC5.51□□□□□ -1.53
CHMP4AQ9BY43 OR4A12P-201ENST00000530847 918 ntBASIC5.51□□□□□ -1.53
CHMP4AQ9BY43 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC5.51□□□□□ -1.53
CHMP4AQ9BY43 CYB5AP5-201ENST00000549779 389 ntBASIC5.51□□□□□ -1.53
CHMP4AQ9BY43 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC5.51□□□□□ -1.53
CHMP4AQ9BY43 AC126365.2-201ENST00000580630 379 ntBASIC5.51□□□□□ -1.53
CHMP4AQ9BY43 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC5.51□□□□□ -1.53
CHMP4AQ9BY43 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC5.51□□□□□ -1.53
CHMP4AQ9BY43 SLC25A36P1-201ENST00000590111 465 ntBASIC5.51□□□□□ -1.53
CHMP4AQ9BY43 AL160290.3-201ENST00000604869 165 ntBASIC5.51□□□□□ -1.53
CHMP4AQ9BY43 AL590392.1-201ENST00000604960 446 ntBASIC5.51□□□□□ -1.53
CHMP4AQ9BY43 AC128687.1-201ENST00000605304 619 ntBASIC5.51□□□□□ -1.53
CHMP4AQ9BY43 AC099676.1-201ENST00000608886 657 ntBASIC5.51□□□□□ -1.53
CHMP4AQ9BY43 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC5.51□□□□□ -1.53
CHMP4AQ9BY43 AL138721.1-201ENST00000616756 179 ntBASIC5.51□□□□□ -1.53
CHMP4AQ9BY43 MIR6758-201ENST00000620653 63 ntBASIC5.51□□□□□ -1.53
CHMP4AQ9BY43 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CHMP4AQ9BY43 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC5.51□□□□□ -1.53
CHMP4AQ9BY43 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC5.51□□□□□ -1.53
CHMP4AQ9BY43 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CHMP4AQ9BY43 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
CHMP4AQ9BY43 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
CHMP4AQ9BY43 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CHMP4AQ9BY43 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CHMP4AQ9BY43 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
CHMP4AQ9BY43 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CHMP4AQ9BY43 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
CHMP4AQ9BY43 SNORD116-23-201ENST00000384645 92 ntBASIC5.5□□□□□ -1.53
CHMP4AQ9BY43 AL024474.1-201ENST00000404655 591 ntBASIC5.5□□□□□ -1.53
CHMP4AQ9BY43 AL583834.1-201ENST00000406943 343 ntBASIC5.5□□□□□ -1.53
CHMP4AQ9BY43 RN7SKP235-201ENST00000410662 305 ntBASIC5.5□□□□□ -1.53
CHMP4AQ9BY43 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC5.5□□□□□ -1.53
CHMP4AQ9BY43 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC5.5□□□□□ -1.53
CHMP4AQ9BY43 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CHMP4AQ9BY43 UBE2V1P6-201ENST00000430840 422 ntBASIC5.5□□□□□ -1.53
CHMP4AQ9BY43 SETP5-201ENST00000437270 562 ntBASIC5.5□□□□□ -1.53
CHMP4AQ9BY43 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC5.5□□□□□ -1.53
CHMP4AQ9BY43 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC5.5□□□□□ -1.53
CHMP4AQ9BY43 BNIP3P41-201ENST00000503774 571 ntBASIC5.5□□□□□ -1.53
CHMP4AQ9BY43 AC108475.1-201ENST00000507880 950 ntBASIC5.5□□□□□ -1.53
CHMP4AQ9BY43 MTCO3P44-201ENST00000510977 541 ntBASIC5.5□□□□□ -1.53
CHMP4AQ9BY43 USP9YP5-201ENST00000511770 630 ntBASIC5.5□□□□□ -1.53
CHMP4AQ9BY43 RNA5SP468-201ENST00000516782 93 ntBASIC5.5□□□□□ -1.53
CHMP4AQ9BY43 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC5.5□□□□□ -1.53
CHMP4AQ9BY43 TRAV8-5-201ENST00000537369 341 ntBASIC5.5□□□□□ -1.53
CHMP4AQ9BY43 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC5.5□□□□□ -1.53
CHMP4AQ9BY43 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC5.5□□□□□ -1.53
CHMP4AQ9BY43 KPNA2P3-201ENST00000584190 848 ntBASIC5.5□□□□□ -1.53
CHMP4AQ9BY43 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CHMP4AQ9BY43 VN1R7P-201ENST00000619242 903 ntBASIC5.5□□□□□ -1.53
CHMP4AQ9BY43 MTND2P41-201ENST00000637599 773 ntBASIC5.5□□□□□ -1.53
CHMP4AQ9BY43 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
CHMP4AQ9BY43 HSP90AA4P-202ENST00000506915 2228 ntBASIC5.5□□□□□ -1.53
CHMP4AQ9BY43 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CHMP4AQ9BY43 GDI2P1-201ENST00000429312 1336 ntBASIC5.49□□□□□ -1.53
CHMP4AQ9BY43 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CHMP4AQ9BY43 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC5.49□□□□□ -1.53
CHMP4AQ9BY43 RNU6-50P-201ENST00000362356 103 ntBASIC5.49□□□□□ -1.53
CHMP4AQ9BY43 RNA5SP372-201ENST00000390836 115 ntBASIC5.49□□□□□ -1.53
CHMP4AQ9BY43 AC097374.1-203ENST00000400783 485 ntBASIC5.49□□□□□ -1.53
CHMP4AQ9BY43 RN7SKP182-201ENST00000410772 298 ntBASIC5.49□□□□□ -1.53
CHMP4AQ9BY43 MIR1911-201ENST00000410783 80 ntBASIC5.49□□□□□ -1.53
CHMP4AQ9BY43 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CHMP4AQ9BY43 RAD23BP2-201ENST00000416003 1207 ntBASIC5.49□□□□□ -1.53
CHMP4AQ9BY43 RPL23AP38-201ENST00000423801 469 ntBASIC5.49□□□□□ -1.53
CHMP4AQ9BY43 AC073335.1-201ENST00000427776 363 ntBASIC5.49□□□□□ -1.53
CHMP4AQ9BY43 BLOC1S2P1-201ENST00000428431 301 ntBASIC5.49□□□□□ -1.53
CHMP4AQ9BY43 AC091390.1-201ENST00000433904 331 ntBASIC5.49□□□□□ -1.53
CHMP4AQ9BY43 ABCF2P2-201ENST00000450549 296 ntBASIC5.49□□□□□ -1.53
CHMP4AQ9BY43 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC5.49□□□□□ -1.53
CHMP4AQ9BY43 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC5.49□□□□□ -1.53
CHMP4AQ9BY43 RPL23AP62-201ENST00000463396 453 ntBASIC5.49□□□□□ -1.53
CHMP4AQ9BY43 RPL21P18-201ENST00000469899 480 ntBASIC5.49□□□□□ -1.53
CHMP4AQ9BY43 RN7SL817P-201ENST00000480777 288 ntBASIC5.49□□□□□ -1.53
CHMP4AQ9BY43 AC041039.1-201ENST00000485656 536 ntBASIC5.49□□□□□ -1.53
CHMP4AQ9BY43 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC5.49□□□□□ -1.53
CHMP4AQ9BY43 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC5.49□□□□□ -1.53
CHMP4AQ9BY43 AP000790.1-201ENST00000528891 737 ntBASIC5.49□□□□□ -1.53
CHMP4AQ9BY43 TVP23BP1-201ENST00000557500 617 ntBASIC5.49□□□□□ -1.53
CHMP4AQ9BY43 AL158211.2-201ENST00000607282 395 ntBASIC5.49□□□□□ -1.53
CHMP4AQ9BY43 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CHMP4AQ9BY43 MIR492-201ENST00000638676 116 ntBASIC5.49□□□□□ -1.53
CHMP4AQ9BY43 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC5.49□□□□□ -1.53
CHMP4AQ9BY43 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC5.49□□□□□ -1.53
CHMP4AQ9BY43 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC5.49□□□□□ -1.53
CHMP4AQ9BY43 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
CHMP4AQ9BY43 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC5.49□□□□□ -1.53
CHMP4AQ9BY43 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CHMP4AQ9BY43 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CHMP4AQ9BY43 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
CHMP4AQ9BY43 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CHMP4AQ9BY43 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC5.48□□□□□ -1.53
CHMP4AQ9BY43 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CHMP4AQ9BY43 RNU6-582P-201ENST00000362989 107 ntBASIC5.48□□□□□ -1.53
CHMP4AQ9BY43 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CHMP4AQ9BY43 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
CHMP4AQ9BY43 AP000567.1-201ENST00000406413 156 ntBASIC5.48□□□□□ -1.53
CHMP4AQ9BY43 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC5.48□□□□□ -1.53
CHMP4AQ9BY43 RPL21P108-201ENST00000413857 481 ntBASIC5.48□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms