Protein–RNA interactions for Protein: Q96RL7

VPS13A, Vacuolar protein sorting-associated protein 13A, humanhuman

Predictions only

Length 3,174 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13AQ96RL7 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC2.97□□□□□ -1.93
VPS13AQ96RL7 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC2.97□□□□□ -1.93
VPS13AQ96RL7 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC2.97□□□□□ -1.93
VPS13AQ96RL7 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
VPS13AQ96RL7 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC2.97□□□□□ -1.93
VPS13AQ96RL7 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
VPS13AQ96RL7 AL450338.1-201ENST00000407987 512 ntBASIC2.96□□□□□ -1.94
VPS13AQ96RL7 AL645937.1-202ENST00000421799 937 ntBASIC2.96□□□□□ -1.94
VPS13AQ96RL7 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC2.96□□□□□ -1.94
VPS13AQ96RL7 AC022149.2-201ENST00000621061 203 ntBASIC2.96□□□□□ -1.94
VPS13AQ96RL7 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
VPS13AQ96RL7 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
VPS13AQ96RL7 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC2.96□□□□□ -1.94
VPS13AQ96RL7 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC2.96□□□□□ -1.94
VPS13AQ96RL7 HSPA8P4-201ENST00000511877 1920 ntBASIC2.96□□□□□ -1.94
VPS13AQ96RL7 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC2.96□□□□□ -1.94
VPS13AQ96RL7 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC2.96□□□□□ -1.94
VPS13AQ96RL7 SEPT14P1-201ENST00000458703 648 ntBASIC2.96□□□□□ -1.94
VPS13AQ96RL7 RPS20P22-201ENST00000473700 357 ntBASIC2.96□□□□□ -1.94
VPS13AQ96RL7 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC2.96□□□□□ -1.94
VPS13AQ96RL7 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC2.96□□□□□ -1.94
VPS13AQ96RL7 AC099489.2-201ENST00000574976 260 ntBASIC2.96□□□□□ -1.94
VPS13AQ96RL7 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC2.96□□□□□ -1.94
VPS13AQ96RL7 AC026790.2-201ENST00000606282 430 ntBASIC2.96□□□□□ -1.94
VPS13AQ96RL7 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC2.96□□□□□ -1.94
VPS13AQ96RL7 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC2.96□□□□□ -1.94
VPS13AQ96RL7 AC125336.1-201ENST00000508893 2827 ntBASIC2.96□□□□□ -1.94
VPS13AQ96RL7 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
VPS13AQ96RL7 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC2.96□□□□□ -1.94
VPS13AQ96RL7 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC2.96□□□□□ -1.94
VPS13AQ96RL7 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
VPS13AQ96RL7 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC2.96□□□□□ -1.94
VPS13AQ96RL7 U8.2-201ENST00000363156 134 ntBASIC2.96□□□□□ -1.94
VPS13AQ96RL7 U3.42-201ENST00000408746 214 ntBASIC2.96□□□□□ -1.94
VPS13AQ96RL7 IFNNP1-201ENST00000429219 553 ntBASIC2.96□□□□□ -1.94
VPS13AQ96RL7 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
VPS13AQ96RL7 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC2.96□□□□□ -1.94
VPS13AQ96RL7 AC018797.3-201ENST00000513388 1241 ntBASIC2.96□□□□□ -1.94
VPS13AQ96RL7 RNU1-143P-201ENST00000516296 146 ntBASIC2.96□□□□□ -1.94
VPS13AQ96RL7 IGKV2-36-201ENST00000519999 223 ntBASIC2.96□□□□□ -1.94
VPS13AQ96RL7 AL358913.1-201ENST00000554342 121 ntBASIC2.96□□□□□ -1.94
VPS13AQ96RL7 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC2.96□□□□□ -1.94
VPS13AQ96RL7 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC2.96□□□□□ -1.94
VPS13AQ96RL7 U1.23-201ENST00000610293 146 ntBASIC2.96□□□□□ -1.94
VPS13AQ96RL7 RNU1-68P-201ENST00000615382 146 ntBASIC2.96□□□□□ -1.94
VPS13AQ96RL7 MIR6817-201ENST00000615588 66 ntBASIC2.96□□□□□ -1.94
VPS13AQ96RL7 U1.39-201ENST00000621562 146 ntBASIC2.96□□□□□ -1.94
VPS13AQ96RL7 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC2.96□□□□□ -1.94
VPS13AQ96RL7 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
VPS13AQ96RL7 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC2.95□□□□□ -1.94
VPS13AQ96RL7 SCN2A-215ENST00000637266 8610 ntAPPRIS ALT1 TSL 5 BASIC2.95□□□□□ -1.94
VPS13AQ96RL7 CEP170P1-201ENST00000502249 4587 ntBASIC2.95□□□□□ -1.94
VPS13AQ96RL7 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC2.95□□□□□ -1.94
VPS13AQ96RL7 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
VPS13AQ96RL7 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
VPS13AQ96RL7 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC2.95□□□□□ -1.94
VPS13AQ96RL7 RPS12P18-201ENST00000442381 270 ntBASIC2.95□□□□□ -1.94
VPS13AQ96RL7 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC2.95□□□□□ -1.94
VPS13AQ96RL7 SNRPGP5-201ENST00000456003 220 ntBASIC2.95□□□□□ -1.94
VPS13AQ96RL7 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC2.95□□□□□ -1.94
VPS13AQ96RL7 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC2.95□□□□□ -1.94
VPS13AQ96RL7 GMCL1P2-201ENST00000605230 823 ntBASIC2.95□□□□□ -1.94
VPS13AQ96RL7 AC092184.1-201ENST00000625042 715 ntBASIC2.95□□□□□ -1.94
VPS13AQ96RL7 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC2.95□□□□□ -1.94
VPS13AQ96RL7 ELF2P3-201ENST00000445099 1506 ntBASIC2.95□□□□□ -1.94
VPS13AQ96RL7 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC2.95□□□□□ -1.94
VPS13AQ96RL7 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC2.95□□□□□ -1.94
VPS13AQ96RL7 AC004972.1-201ENST00000623934 2209 ntBASIC2.95□□□□□ -1.94
VPS13AQ96RL7 RNU1-112P-201ENST00000364401 164 ntBASIC2.95□□□□□ -1.94
VPS13AQ96RL7 MIR513A2-201ENST00000385249 127 ntBASIC2.95□□□□□ -1.94
VPS13AQ96RL7 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC2.95□□□□□ -1.94
VPS13AQ96RL7 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC2.95□□□□□ -1.94
VPS13AQ96RL7 YWHAQP9-201ENST00000445891 512 ntBASIC2.95□□□□□ -1.94
VPS13AQ96RL7 AC021205.2-201ENST00000480069 347 ntBASIC2.95□□□□□ -1.94
VPS13AQ96RL7 RPS4XP22-201ENST00000480755 780 ntBASIC2.95□□□□□ -1.94
VPS13AQ96RL7 RPL23AP73-201ENST00000492507 471 ntBASIC2.95□□□□□ -1.94
VPS13AQ96RL7 SERPINE4P-201ENST00000554978 281 ntBASIC2.95□□□□□ -1.94
VPS13AQ96RL7 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC2.95□□□□□ -1.94
VPS13AQ96RL7 MAPK10-362ENST00000641864 4484 ntBASIC2.95□□□□□ -1.94
VPS13AQ96RL7 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC2.95□□□□□ -1.94
VPS13AQ96RL7 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC2.94□□□□□ -1.94
VPS13AQ96RL7 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC2.94□□□□□ -1.94
VPS13AQ96RL7 MIR184-201ENST00000384962 84 ntBASIC2.94□□□□□ -1.94
VPS13AQ96RL7 RPS4XP7-201ENST00000406274 780 ntBASIC2.94□□□□□ -1.94
VPS13AQ96RL7 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC2.94□□□□□ -1.94
VPS13AQ96RL7 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
VPS13AQ96RL7 LINC02374-201ENST00000503637 743 ntTSL 3 BASIC2.94□□□□□ -1.94
VPS13AQ96RL7 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC2.94□□□□□ -1.94
VPS13AQ96RL7 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC2.94□□□□□ -1.94
VPS13AQ96RL7 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
VPS13AQ96RL7 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
VPS13AQ96RL7 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
VPS13AQ96RL7 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
VPS13AQ96RL7 Y_RNA.40-201ENST00000362645 93 ntBASIC2.94□□□□□ -1.94
VPS13AQ96RL7 SNORA3.2-201ENST00000408221 125 ntBASIC2.94□□□□□ -1.94
VPS13AQ96RL7 RNU2-52P-201ENST00000410680 190 ntBASIC2.94□□□□□ -1.94
VPS13AQ96RL7 AL356968.1-201ENST00000416622 474 ntBASIC2.94□□□□□ -1.94
VPS13AQ96RL7 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC2.94□□□□□ -1.94
VPS13AQ96RL7 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC2.94□□□□□ -1.94
VPS13AQ96RL7 AC007336.1-201ENST00000576365 3828 ntBASIC2.94□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 140.2 ms