Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 NMD3P1-201ENST00000439704 1488 ntBASIC3.6□□□□□ -1.83
ECHDC3Q96DC8 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
ECHDC3Q96DC8 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
ECHDC3Q96DC8 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
ECHDC3Q96DC8 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
ECHDC3Q96DC8 AL049781.1-201ENST00000623195 3585 ntBASIC3.59□□□□□ -1.83
ECHDC3Q96DC8 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.59□□□□□ -1.83
ECHDC3Q96DC8 AC090337.1-201ENST00000579651 2074 ntBASIC3.59□□□□□ -1.83
ECHDC3Q96DC8 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
ECHDC3Q96DC8 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
ECHDC3Q96DC8 AL365440.1-201ENST00000436135 2167 ntBASIC3.59□□□□□ -1.83
ECHDC3Q96DC8 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
ECHDC3Q96DC8 AC007656.2-201ENST00000624902 4547 ntBASIC3.59□□□□□ -1.83
ECHDC3Q96DC8 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
ECHDC3Q96DC8 SNORA71.3-201ENST00000362582 128 ntBASIC3.59□□□□□ -1.83
ECHDC3Q96DC8 RNA5SP119-201ENST00000362715 117 ntBASIC3.59□□□□□ -1.83
ECHDC3Q96DC8 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.59□□□□□ -1.83
ECHDC3Q96DC8 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
ECHDC3Q96DC8 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.59□□□□□ -1.83
ECHDC3Q96DC8 RNU2-6P-201ENST00000411404 190 ntBASIC3.59□□□□□ -1.83
ECHDC3Q96DC8 LINC01881-201ENST00000416103 412 ntBASIC3.59□□□□□ -1.83
ECHDC3Q96DC8 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.59□□□□□ -1.83
ECHDC3Q96DC8 AL389915.1-201ENST00000422463 466 ntBASIC3.59□□□□□ -1.83
ECHDC3Q96DC8 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.59□□□□□ -1.83
ECHDC3Q96DC8 AC008065.1-201ENST00000428525 348 ntBASIC3.59□□□□□ -1.83
ECHDC3Q96DC8 AL050321.1-201ENST00000432363 400 ntBASIC3.59□□□□□ -1.83
ECHDC3Q96DC8 AC092641.1-201ENST00000440229 772 ntBASIC3.59□□□□□ -1.83
ECHDC3Q96DC8 RPS15AP29-201ENST00000445539 400 ntBASIC3.59□□□□□ -1.83
ECHDC3Q96DC8 RSL24D1P2-201ENST00000445584 366 ntBASIC3.59□□□□□ -1.83
ECHDC3Q96DC8 PDSS1P2-201ENST00000449397 678 ntBASIC3.59□□□□□ -1.83
ECHDC3Q96DC8 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC3.59□□□□□ -1.83
ECHDC3Q96DC8 AL136097.1-201ENST00000456945 913 ntBASIC3.59□□□□□ -1.83
ECHDC3Q96DC8 NPM1P17-201ENST00000479221 602 ntBASIC3.59□□□□□ -1.83
ECHDC3Q96DC8 AC092451.1-201ENST00000480211 153 ntBASIC3.59□□□□□ -1.83
ECHDC3Q96DC8 SSR3-208ENST00000496050 579 ntTSL 4 BASIC3.59□□□□□ -1.83
ECHDC3Q96DC8 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC3.59□□□□□ -1.83
ECHDC3Q96DC8 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC3.59□□□□□ -1.83
ECHDC3Q96DC8 HAUS1P3-201ENST00000523909 662 ntBASIC3.59□□□□□ -1.83
ECHDC3Q96DC8 AP000926.4-201ENST00000527351 454 ntBASIC3.59□□□□□ -1.83
ECHDC3Q96DC8 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC3.59□□□□□ -1.83
ECHDC3Q96DC8 AC103843.2-201ENST00000530523 682 ntBASIC3.59□□□□□ -1.83
ECHDC3Q96DC8 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.59□□□□□ -1.83
ECHDC3Q96DC8 CBX3P2-202ENST00000583365 535 ntBASIC3.59□□□□□ -1.83
ECHDC3Q96DC8 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC3.59□□□□□ -1.83
ECHDC3Q96DC8 MIR3922-201ENST00000585192 84 ntBASIC3.59□□□□□ -1.83
ECHDC3Q96DC8 AC006116.10-201ENST00000591836 581 ntBASIC3.59□□□□□ -1.83
ECHDC3Q96DC8 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.59□□□□□ -1.83
ECHDC3Q96DC8 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC3.59□□□□□ -1.83
ECHDC3Q96DC8 AC012531.5-201ENST00000611375 151 ntBASIC3.59□□□□□ -1.83
ECHDC3Q96DC8 AC243312.2-201ENST00000623340 601 ntBASIC3.59□□□□□ -1.83
ECHDC3Q96DC8 AP003355.3-201ENST00000623465 114 ntBASIC3.59□□□□□ -1.83
ECHDC3Q96DC8 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC3.59□□□□□ -1.83
ECHDC3Q96DC8 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
ECHDC3Q96DC8 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
ECHDC3Q96DC8 AC022031.1-201ENST00000585985 2593 ntBASIC3.59□□□□□ -1.83
ECHDC3Q96DC8 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
ECHDC3Q96DC8 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
ECHDC3Q96DC8 DDX6P1-205ENST00000441966 1436 ntBASIC3.59□□□□□ -1.84
ECHDC3Q96DC8 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
ECHDC3Q96DC8 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.84
ECHDC3Q96DC8 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC3.59□□□□□ -1.84
ECHDC3Q96DC8 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
ECHDC3Q96DC8 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
ECHDC3Q96DC8 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
ECHDC3Q96DC8 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
ECHDC3Q96DC8 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
ECHDC3Q96DC8 RNU6-283P-201ENST00000364788 107 ntBASIC3.58□□□□□ -1.84
ECHDC3Q96DC8 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
ECHDC3Q96DC8 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
ECHDC3Q96DC8 RNU6-98P-201ENST00000384173 107 ntBASIC3.58□□□□□ -1.84
ECHDC3Q96DC8 DBIP2-201ENST00000419076 262 ntBASIC3.58□□□□□ -1.84
ECHDC3Q96DC8 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.58□□□□□ -1.84
ECHDC3Q96DC8 AC006989.1-201ENST00000427212 131 ntBASIC3.58□□□□□ -1.84
ECHDC3Q96DC8 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC3.58□□□□□ -1.84
ECHDC3Q96DC8 ATP5JP1-201ENST00000431631 322 ntBASIC3.58□□□□□ -1.84
ECHDC3Q96DC8 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.58□□□□□ -1.84
ECHDC3Q96DC8 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC3.58□□□□□ -1.84
ECHDC3Q96DC8 RPL6P5-201ENST00000445678 828 ntBASIC3.58□□□□□ -1.84
ECHDC3Q96DC8 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.58□□□□□ -1.84
ECHDC3Q96DC8 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC3.58□□□□□ -1.84
ECHDC3Q96DC8 MTCO3P20-201ENST00000454926 688 ntBASIC3.58□□□□□ -1.84
ECHDC3Q96DC8 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC3.58□□□□□ -1.84
ECHDC3Q96DC8 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC3.58□□□□□ -1.84
ECHDC3Q96DC8 RNU7-170P-201ENST00000459303 61 ntBASIC3.58□□□□□ -1.84
ECHDC3Q96DC8 RPL37P6-202ENST00000464216 403 ntBASIC3.58□□□□□ -1.84
ECHDC3Q96DC8 RPL7L1P8-201ENST00000469911 741 ntBASIC3.58□□□□□ -1.84
ECHDC3Q96DC8 TMED11P-201ENST00000479478 690 ntBASIC3.58□□□□□ -1.84
ECHDC3Q96DC8 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.58□□□□□ -1.84
ECHDC3Q96DC8 MTCO1P30-201ENST00000515244 580 ntBASIC3.58□□□□□ -1.84
ECHDC3Q96DC8 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC3.58□□□□□ -1.84
ECHDC3Q96DC8 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC3.58□□□□□ -1.84
ECHDC3Q96DC8 NOP56P3-201ENST00000549457 385 ntBASIC3.58□□□□□ -1.84
ECHDC3Q96DC8 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
ECHDC3Q96DC8 AC006270.2-201ENST00000578523 652 ntBASIC3.58□□□□□ -1.84
ECHDC3Q96DC8 AP000919.1-202ENST00000581139 1264 ntBASIC3.58□□□□□ -1.84
ECHDC3Q96DC8 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.58□□□□□ -1.84
ECHDC3Q96DC8 SUMO2P14-201ENST00000604488 293 ntBASIC3.58□□□□□ -1.84
ECHDC3Q96DC8 AL034351.1-201ENST00000605288 668 ntBASIC3.58□□□□□ -1.84
ECHDC3Q96DC8 BX322635.1-201ENST00000605804 496 ntBASIC3.58□□□□□ -1.84
ECHDC3Q96DC8 AC015802.5-201ENST00000607478 399 ntBASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 109.7 ms