Protein–RNA interactions for Protein: Q92547

TOPBP1, DNA topoisomerase 2-binding protein 1, humanhuman

Predictions only

Length 1,522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1Q92547 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC5.12□□□□□ -1.59
TOPBP1Q92547 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
TOPBP1Q92547 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
TOPBP1Q92547 AL353692.2-201ENST00000407054 335 ntBASIC5.12□□□□□ -1.59
TOPBP1Q92547 RNA5SP39-201ENST00000411245 120 ntBASIC5.12□□□□□ -1.59
TOPBP1Q92547 AC063976.3-201ENST00000426849 329 ntBASIC5.12□□□□□ -1.59
TOPBP1Q92547 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC5.12□□□□□ -1.59
TOPBP1Q92547 PRDX3P4-201ENST00000470828 747 ntBASIC5.12□□□□□ -1.59
TOPBP1Q92547 AC015813.4-201ENST00000610469 179 ntBASIC5.12□□□□□ -1.59
TOPBP1Q92547 AC068722.2-201ENST00000618734 544 ntBASIC5.12□□□□□ -1.59
TOPBP1Q92547 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC5.12□□□□□ -1.59
TOPBP1Q92547 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
TOPBP1Q92547 NFIB-202ENST00000380924 840 ntTSL 5 BASIC5.11□□□□□ -1.59
TOPBP1Q92547 OR2X1P-201ENST00000421144 687 ntBASIC5.11□□□□□ -1.59
TOPBP1Q92547 AC073508.1-201ENST00000428866 656 ntBASIC5.11□□□□□ -1.59
TOPBP1Q92547 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC5.11□□□□□ -1.59
TOPBP1Q92547 AC112653.1-201ENST00000443851 386 ntBASIC5.11□□□□□ -1.59
TOPBP1Q92547 EIF4A2P3-201ENST00000525903 1055 ntBASIC5.11□□□□□ -1.59
TOPBP1Q92547 OR4C2P-201ENST00000530855 1064 ntBASIC5.11□□□□□ -1.59
TOPBP1Q92547 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC5.11□□□□□ -1.59
TOPBP1Q92547 AC106734.1-201ENST00000568646 663 ntBASIC5.11□□□□□ -1.59
TOPBP1Q92547 AC138761.3-201ENST00000579993 334 ntBASIC5.11□□□□□ -1.59
TOPBP1Q92547 AC124856.1-201ENST00000600819 896 ntBASIC5.11□□□□□ -1.59
TOPBP1Q92547 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC5.11□□□□□ -1.59
TOPBP1Q92547 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.1□□□□□ -1.59
TOPBP1Q92547 USP33-201ENST00000357428 4155 ntTSL 5 BASIC5.1□□□□□ -1.59
TOPBP1Q92547 ASNSP1-201ENST00000518311 1939 ntBASIC5.1□□□□□ -1.59
TOPBP1Q92547 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC5.1□□□□□ -1.59
TOPBP1Q92547 CRP-202ENST00000368110 667 ntTSL 3 BASIC5.1□□□□□ -1.59
TOPBP1Q92547 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
TOPBP1Q92547 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
TOPBP1Q92547 CST9LP2-201ENST00000437612 320 ntBASIC5.1□□□□□ -1.59
TOPBP1Q92547 FTH1P1-201ENST00000437933 532 ntBASIC5.1□□□□□ -1.59
TOPBP1Q92547 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
TOPBP1Q92547 RPS3P1-201ENST00000456781 192 ntBASIC5.1□□□□□ -1.59
TOPBP1Q92547 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC5.1□□□□□ -1.59
TOPBP1Q92547 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC5.1□□□□□ -1.59
TOPBP1Q92547 IGHVII-62-1-201ENST00000519283 235 ntBASIC5.1□□□□□ -1.59
TOPBP1Q92547 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
TOPBP1Q92547 AC099489.2-201ENST00000574976 260 ntBASIC5.1□□□□□ -1.59
TOPBP1Q92547 AP005262.1-201ENST00000582646 997 ntBASIC5.1□□□□□ -1.59
TOPBP1Q92547 AL583832.1-201ENST00000603227 784 ntBASIC5.1□□□□□ -1.59
TOPBP1Q92547 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
TOPBP1Q92547 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC5.09□□□□□ -1.59
TOPBP1Q92547 AL672167.1-206ENST00000356293 943 ntBASIC5.09□□□□□ -1.59
TOPBP1Q92547 MIR34A-201ENST00000385130 110 ntBASIC5.09□□□□□ -1.59
TOPBP1Q92547 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC5.09□□□□□ -1.59
TOPBP1Q92547 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC5.09□□□□□ -1.59
TOPBP1Q92547 MYL8P-204ENST00000431574 518 ntBASIC5.09□□□□□ -1.59
TOPBP1Q92547 MRPS31P2-201ENST00000451581 518 ntBASIC5.09□□□□□ -1.59
TOPBP1Q92547 METTL15P1-201ENST00000481421 1045 ntBASIC5.09□□□□□ -1.59
TOPBP1Q92547 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC5.09□□□□□ -1.59
TOPBP1Q92547 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC5.09□□□□□ -1.59
TOPBP1Q92547 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC5.09□□□□□ -1.59
TOPBP1Q92547 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC5.09□□□□□ -1.59
TOPBP1Q92547 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC5.09□□□□□ -1.59
TOPBP1Q92547 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC5.09□□□□□ -1.59
TOPBP1Q92547 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
TOPBP1Q92547 AC087190.4-201ENST00000574616 8334 ntBASIC5.09□□□□□ -1.59
TOPBP1Q92547 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC5.09□□□□□ -1.59
TOPBP1Q92547 IDE-202ENST00000371581 4480 ntTSL 2 BASIC5.09□□□□□ -1.59
TOPBP1Q92547 SCN1A-220ENST00000641603 12506 ntBASIC5.09□□□□□ -1.59
TOPBP1Q92547 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
TOPBP1Q92547 SNORA67.4-201ENST00000384688 142 ntBASIC5.08□□□□□ -1.6
TOPBP1Q92547 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC5.08□□□□□ -1.6
TOPBP1Q92547 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC5.08□□□□□ -1.6
TOPBP1Q92547 MIR4738-201ENST00000579134 87 ntBASIC5.08□□□□□ -1.6
TOPBP1Q92547 ALG13-230ENST00000623189 458 ntTSL 3 BASIC5.08□□□□□ -1.6
TOPBP1Q92547 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC5.08□□□□□ -1.6
TOPBP1Q92547 AP003122.5-201ENST00000527668 3766 ntBASIC5.08□□□□□ -1.6
TOPBP1Q92547 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
TOPBP1Q92547 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC5.08□□□□□ -1.6
TOPBP1Q92547 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
TOPBP1Q92547 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
TOPBP1Q92547 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC5.08□□□□□ -1.6
TOPBP1Q92547 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
TOPBP1Q92547 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
TOPBP1Q92547 AL592148.1-201ENST00000413568 445 ntBASIC5.07□□□□□ -1.6
TOPBP1Q92547 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC5.07□□□□□ -1.6
TOPBP1Q92547 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC5.07□□□□□ -1.6
TOPBP1Q92547 AHI1-217ENST00000534469 680 ntTSL 3 BASIC5.07□□□□□ -1.6
TOPBP1Q92547 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC5.07□□□□□ -1.6
TOPBP1Q92547 AC233702.9-201ENST00000581528 203 ntBASIC5.07□□□□□ -1.6
TOPBP1Q92547 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC5.07□□□□□ -1.6
TOPBP1Q92547 AC074276.2-201ENST00000619891 348 ntBASIC5.07□□□□□ -1.6
TOPBP1Q92547 TOPORSLP1-201ENST00000467693 2102 ntBASIC5.07□□□□□ -1.6
TOPBP1Q92547 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC5.07□□□□□ -1.6
TOPBP1Q92547 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC5.07□□□□□ -1.6
TOPBP1Q92547 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC5.07□□□□□ -1.6
TOPBP1Q92547 ANKRD36BP1-201ENST00000358576 1779 ntBASIC5.07□□□□□ -1.6
TOPBP1Q92547 YWHAEP5-201ENST00000431545 765 ntBASIC5.07□□□□□ -1.6
TOPBP1Q92547 AC010307.1-201ENST00000467206 836 ntBASIC5.07□□□□□ -1.6
TOPBP1Q92547 LINC02374-201ENST00000503637 743 ntTSL 3 BASIC5.07□□□□□ -1.6
TOPBP1Q92547 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC5.07□□□□□ -1.6
TOPBP1Q92547 MIR2276-201ENST00000516886 89 ntBASIC5.07□□□□□ -1.6
TOPBP1Q92547 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC5.07□□□□□ -1.6
TOPBP1Q92547 AL049874.4-201ENST00000557593 255 ntBASIC5.07□□□□□ -1.6
TOPBP1Q92547 MIR5047-201ENST00000579212 100 ntBASIC5.07□□□□□ -1.6
TOPBP1Q92547 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC5.07□□□□□ -1.6
TOPBP1Q92547 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 121.9 ms