Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 AL591516.1-201ENST00000611326 274 ntBASIC4.73□□□□□ -1.65
VPS8Q8N3P4 AC135507.2-201ENST00000612443 309 ntBASIC4.73□□□□□ -1.65
VPS8Q8N3P4 AC007318.2-201ENST00000620999 243 ntBASIC4.73□□□□□ -1.65
VPS8Q8N3P4 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC4.73□□□□□ -1.65
VPS8Q8N3P4 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC4.73□□□□□ -1.65
VPS8Q8N3P4 RIOK3P1-201ENST00000418778 1528 ntBASIC4.73□□□□□ -1.65
VPS8Q8N3P4 AL592494.2-201ENST00000425455 1548 ntBASIC4.73□□□□□ -1.65
VPS8Q8N3P4 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
VPS8Q8N3P4 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC4.73□□□□□ -1.65
VPS8Q8N3P4 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC4.73□□□□□ -1.65
VPS8Q8N3P4 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
VPS8Q8N3P4 OR10J6P-201ENST00000289731 930 ntBASIC4.72□□□□□ -1.65
VPS8Q8N3P4 OR5H2-201ENST00000355273 945 ntBASIC4.72□□□□□ -1.65
VPS8Q8N3P4 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
VPS8Q8N3P4 RNA5SP383-201ENST00000362934 120 ntBASIC4.72□□□□□ -1.65
VPS8Q8N3P4 Y_RNA.111-201ENST00000363248 100 ntBASIC4.72□□□□□ -1.65
VPS8Q8N3P4 MTCO1P45-201ENST00000431457 267 ntBASIC4.72□□□□□ -1.65
VPS8Q8N3P4 AC112653.1-201ENST00000443851 386 ntBASIC4.72□□□□□ -1.65
VPS8Q8N3P4 RPS3AP14-201ENST00000483907 780 ntBASIC4.72□□□□□ -1.65
VPS8Q8N3P4 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC4.72□□□□□ -1.65
VPS8Q8N3P4 AC009812.2-201ENST00000517657 457 ntBASIC4.72□□□□□ -1.65
VPS8Q8N3P4 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC4.72□□□□□ -1.65
VPS8Q8N3P4 HNRNPDLP4-201ENST00000605144 301 ntBASIC4.72□□□□□ -1.65
VPS8Q8N3P4 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC4.72□□□□□ -1.65
VPS8Q8N3P4 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
VPS8Q8N3P4 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
VPS8Q8N3P4 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
VPS8Q8N3P4 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
VPS8Q8N3P4 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC4.72□□□□□ -1.65
VPS8Q8N3P4 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
VPS8Q8N3P4 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.72□□□□□ -1.65
VPS8Q8N3P4 SNORA46-201ENST00000384762 135 ntBASIC4.72□□□□□ -1.65
VPS8Q8N3P4 RPL32P35-201ENST00000415214 394 ntBASIC4.72□□□□□ -1.65
VPS8Q8N3P4 AC105402.2-201ENST00000438503 358 ntBASIC4.72□□□□□ -1.65
VPS8Q8N3P4 AC091544.1-201ENST00000484702 348 ntBASIC4.72□□□□□ -1.65
VPS8Q8N3P4 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC4.72□□□□□ -1.65
VPS8Q8N3P4 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC4.72□□□□□ -1.65
VPS8Q8N3P4 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
VPS8Q8N3P4 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.65
VPS8Q8N3P4 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC4.71□□□□□ -1.65
VPS8Q8N3P4 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
VPS8Q8N3P4 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
VPS8Q8N3P4 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
VPS8Q8N3P4 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC4.71□□□□□ -1.66
VPS8Q8N3P4 AC107081.3-201ENST00000612715 2034 ntBASIC4.71□□□□□ -1.66
VPS8Q8N3P4 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
VPS8Q8N3P4 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
VPS8Q8N3P4 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
VPS8Q8N3P4 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.71□□□□□ -1.66
VPS8Q8N3P4 GNG5P1-201ENST00000255500 204 ntBASIC4.71□□□□□ -1.66
VPS8Q8N3P4 RNU6-805P-201ENST00000365643 106 ntBASIC4.71□□□□□ -1.66
VPS8Q8N3P4 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
VPS8Q8N3P4 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC4.71□□□□□ -1.66
VPS8Q8N3P4 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC4.71□□□□□ -1.66
VPS8Q8N3P4 APAF1-207ENST00000547743 651 ntTSL 3 BASIC4.71□□□□□ -1.66
VPS8Q8N3P4 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC4.71□□□□□ -1.66
VPS8Q8N3P4 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC4.71□□□□□ -1.66
VPS8Q8N3P4 LINC00901.1-201ENST00000617252 152 ntBASIC4.71□□□□□ -1.66
VPS8Q8N3P4 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
VPS8Q8N3P4 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
VPS8Q8N3P4 ZNF807-201ENST00000328088 1707 ntBASIC4.7□□□□□ -1.66
VPS8Q8N3P4 AL672296.1-201ENST00000427780 2158 ntBASIC4.7□□□□□ -1.66
VPS8Q8N3P4 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
VPS8Q8N3P4 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
VPS8Q8N3P4 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC4.7□□□□□ -1.66
VPS8Q8N3P4 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC4.7□□□□□ -1.66
VPS8Q8N3P4 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC4.7□□□□□ -1.66
VPS8Q8N3P4 RPL35AP12-201ENST00000425362 338 ntBASIC4.7□□□□□ -1.66
VPS8Q8N3P4 AC239809.1-201ENST00000450470 217 ntBASIC4.7□□□□□ -1.66
VPS8Q8N3P4 AP001486.1-201ENST00000463339 476 ntBASIC4.7□□□□□ -1.66
VPS8Q8N3P4 RPS4XP13-201ENST00000483219 789 ntBASIC4.7□□□□□ -1.66
VPS8Q8N3P4 OR5G4P-201ENST00000525251 760 ntBASIC4.7□□□□□ -1.66
VPS8Q8N3P4 H3F3AP1-201ENST00000559984 334 ntBASIC4.7□□□□□ -1.66
VPS8Q8N3P4 AC015871.2-201ENST00000603605 948 ntBASIC4.7□□□□□ -1.66
VPS8Q8N3P4 FAM35BP-202ENST00000497389 3337 ntBASIC4.7□□□□□ -1.66
VPS8Q8N3P4 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
VPS8Q8N3P4 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC4.69□□□□□ -1.66
VPS8Q8N3P4 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC4.69□□□□□ -1.66
VPS8Q8N3P4 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
VPS8Q8N3P4 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
VPS8Q8N3P4 MIR1289-1-201ENST00000408836 144 ntBASIC4.69□□□□□ -1.66
VPS8Q8N3P4 RPL7L1P1-201ENST00000448259 785 ntBASIC4.69□□□□□ -1.66
VPS8Q8N3P4 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC4.69□□□□□ -1.66
VPS8Q8N3P4 PRELID3BP6-201ENST00000503839 571 ntBASIC4.69□□□□□ -1.66
VPS8Q8N3P4 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC4.69□□□□□ -1.66
VPS8Q8N3P4 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC4.69□□□□□ -1.66
VPS8Q8N3P4 AL008729.2-201ENST00000606393 473 ntBASIC4.69□□□□□ -1.66
VPS8Q8N3P4 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC4.69□□□□□ -1.66
VPS8Q8N3P4 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
VPS8Q8N3P4 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.69□□□□□ -1.66
VPS8Q8N3P4 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC4.68□□□□□ -1.66
VPS8Q8N3P4 AL135938.1-201ENST00000443141 297 ntBASIC4.68□□□□□ -1.66
VPS8Q8N3P4 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC4.68□□□□□ -1.66
VPS8Q8N3P4 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC4.68□□□□□ -1.66
VPS8Q8N3P4 RPS17P11-201ENST00000474297 293 ntBASIC4.68□□□□□ -1.66
VPS8Q8N3P4 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC4.68□□□□□ -1.66
VPS8Q8N3P4 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC4.68□□□□□ -1.66
VPS8Q8N3P4 LINC02506-201ENST00000513211 734 ntTSL 3 BASIC4.68□□□□□ -1.66
VPS8Q8N3P4 AC011492.1-201ENST00000600023 315 ntBASIC4.68□□□□□ -1.66
VPS8Q8N3P4 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 127.9 ms