Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC3.96□□□□□ -1.78
CCDC65Q8IXS2 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC3.96□□□□□ -1.78
CCDC65Q8IXS2 AL035246.1-201ENST00000433554 1255 ntBASIC3.96□□□□□ -1.78
CCDC65Q8IXS2 RSL24D1P8-201ENST00000434442 492 ntBASIC3.96□□□□□ -1.78
CCDC65Q8IXS2 HSD52-202ENST00000436225 772 ntTSL 3 BASIC3.96□□□□□ -1.78
CCDC65Q8IXS2 RPS29P31-201ENST00000446147 164 ntBASIC3.96□□□□□ -1.78
CCDC65Q8IXS2 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC3.96□□□□□ -1.78
CCDC65Q8IXS2 HMGB3P8-201ENST00000449709 577 ntBASIC3.96□□□□□ -1.78
CCDC65Q8IXS2 SUN3-208ENST00000453192 801 ntTSL 5 BASIC3.96□□□□□ -1.78
CCDC65Q8IXS2 TPRKBP1-201ENST00000456243 481 ntBASIC3.96□□□□□ -1.78
CCDC65Q8IXS2 AC023598.1-201ENST00000472521 361 ntBASIC3.96□□□□□ -1.78
CCDC65Q8IXS2 AC084357.1-201ENST00000473404 255 ntBASIC3.96□□□□□ -1.78
CCDC65Q8IXS2 ACTR3P3-201ENST00000480448 893 ntBASIC3.96□□□□□ -1.78
CCDC65Q8IXS2 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC3.96□□□□□ -1.78
CCDC65Q8IXS2 TBCA-206ENST00000518338 551 ntTSL 2 BASIC3.96□□□□□ -1.78
CCDC65Q8IXS2 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC3.96□□□□□ -1.78
CCDC65Q8IXS2 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC3.96□□□□□ -1.78
CCDC65Q8IXS2 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC3.96□□□□□ -1.78
CCDC65Q8IXS2 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.96□□□□□ -1.78
CCDC65Q8IXS2 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC3.96□□□□□ -1.78
CCDC65Q8IXS2 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC3.96□□□□□ -1.78
CCDC65Q8IXS2 AL049870.4-201ENST00000555741 486 ntBASIC3.96□□□□□ -1.78
CCDC65Q8IXS2 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.96□□□□□ -1.78
CCDC65Q8IXS2 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC3.96□□□□□ -1.78
CCDC65Q8IXS2 MIR4738-201ENST00000579134 87 ntBASIC3.96□□□□□ -1.78
CCDC65Q8IXS2 MIR548Y-201ENST00000582739 110 ntBASIC3.96□□□□□ -1.78
CCDC65Q8IXS2 AC093227.2-201ENST00000589357 285 ntBASIC3.96□□□□□ -1.78
CCDC65Q8IXS2 MIR7973-1-201ENST00000614683 76 ntBASIC3.96□□□□□ -1.78
CCDC65Q8IXS2 AC025016.1-201ENST00000616746 682 ntBASIC3.96□□□□□ -1.78
CCDC65Q8IXS2 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.96□□□□□ -1.78
CCDC65Q8IXS2 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CCDC65Q8IXS2 AC007823.1-201ENST00000569932 1566 ntBASIC3.96□□□□□ -1.78
CCDC65Q8IXS2 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.96□□□□□ -1.78
CCDC65Q8IXS2 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CCDC65Q8IXS2 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
CCDC65Q8IXS2 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
CCDC65Q8IXS2 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CCDC65Q8IXS2 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CCDC65Q8IXS2 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CCDC65Q8IXS2 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC3.95□□□□□ -1.78
CCDC65Q8IXS2 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
CCDC65Q8IXS2 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CCDC65Q8IXS2 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CCDC65Q8IXS2 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CCDC65Q8IXS2 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC3.95□□□□□ -1.78
CCDC65Q8IXS2 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC3.95□□□□□ -1.78
CCDC65Q8IXS2 RNU6ATAC-201ENST00000408749 126 ntBASIC3.95□□□□□ -1.78
CCDC65Q8IXS2 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.95□□□□□ -1.78
CCDC65Q8IXS2 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC3.95□□□□□ -1.78
CCDC65Q8IXS2 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.95□□□□□ -1.78
CCDC65Q8IXS2 AC002075.2-201ENST00000425207 252 ntBASIC3.95□□□□□ -1.78
CCDC65Q8IXS2 OSTCP5-201ENST00000425293 453 ntBASIC3.95□□□□□ -1.78
CCDC65Q8IXS2 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC3.95□□□□□ -1.78
CCDC65Q8IXS2 ELOCP6-201ENST00000429066 328 ntBASIC3.95□□□□□ -1.78
CCDC65Q8IXS2 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CCDC65Q8IXS2 MTND2P21-201ENST00000436242 1042 ntBASIC3.95□□□□□ -1.78
CCDC65Q8IXS2 RRM2P4-201ENST00000441721 562 ntBASIC3.95□□□□□ -1.78
CCDC65Q8IXS2 RPS15AP29-201ENST00000445539 400 ntBASIC3.95□□□□□ -1.78
CCDC65Q8IXS2 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.95□□□□□ -1.78
CCDC65Q8IXS2 ELOCP12-201ENST00000458706 328 ntBASIC3.95□□□□□ -1.78
CCDC65Q8IXS2 SNORD105B-201ENST00000458770 79 ntBASIC3.95□□□□□ -1.78
CCDC65Q8IXS2 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC3.95□□□□□ -1.78
CCDC65Q8IXS2 HESX1-202ENST00000473921 757 ntTSL 5 BASIC3.95□□□□□ -1.78
CCDC65Q8IXS2 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC3.95□□□□□ -1.78
CCDC65Q8IXS2 RN7SKP18-201ENST00000516005 275 ntBASIC3.95□□□□□ -1.78
CCDC65Q8IXS2 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC3.95□□□□□ -1.78
CCDC65Q8IXS2 AC020914.6-201ENST00000594327 272 ntBASIC3.95□□□□□ -1.78
CCDC65Q8IXS2 AC010591.1-201ENST00000603941 649 ntBASIC3.95□□□□□ -1.78
CCDC65Q8IXS2 AC112230.1-201ENST00000604342 547 ntBASIC3.95□□□□□ -1.78
CCDC65Q8IXS2 AC090525.3-201ENST00000605601 189 ntBASIC3.95□□□□□ -1.78
CCDC65Q8IXS2 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.95□□□□□ -1.78
CCDC65Q8IXS2 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.95□□□□□ -1.78
CCDC65Q8IXS2 ZNF542P-204ENST00000482727 1305 ntBASIC3.95□□□□□ -1.78
CCDC65Q8IXS2 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CCDC65Q8IXS2 AC090337.1-201ENST00000579651 2074 ntBASIC3.94□□□□□ -1.78
CCDC65Q8IXS2 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
CCDC65Q8IXS2 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CCDC65Q8IXS2 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CCDC65Q8IXS2 RPL30P2-201ENST00000414021 291 ntBASIC3.94□□□□□ -1.78
CCDC65Q8IXS2 AC007389.2-201ENST00000434630 306 ntBASIC3.94□□□□□ -1.78
CCDC65Q8IXS2 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CCDC65Q8IXS2 ELOCP3-201ENST00000439303 348 ntBASIC3.94□□□□□ -1.78
CCDC65Q8IXS2 RPS7P5-201ENST00000441482 581 ntBASIC3.94□□□□□ -1.78
CCDC65Q8IXS2 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC3.94□□□□□ -1.78
CCDC65Q8IXS2 NAT2-202ENST00000520116 716 ntTSL 3 BASIC3.94□□□□□ -1.78
CCDC65Q8IXS2 AC093331.1-201ENST00000521474 169 ntBASIC3.94□□□□□ -1.78
CCDC65Q8IXS2 IGHV3-76-201ENST00000522465 295 ntBASIC3.94□□□□□ -1.78
CCDC65Q8IXS2 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.94□□□□□ -1.78
CCDC65Q8IXS2 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC3.94□□□□□ -1.78
CCDC65Q8IXS2 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.94□□□□□ -1.78
CCDC65Q8IXS2 DUXAP6-201ENST00000553858 601 ntBASIC3.94□□□□□ -1.78
CCDC65Q8IXS2 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC3.94□□□□□ -1.78
CCDC65Q8IXS2 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.94□□□□□ -1.78
CCDC65Q8IXS2 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC3.94□□□□□ -1.78
CCDC65Q8IXS2 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC3.94□□□□□ -1.78
CCDC65Q8IXS2 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC3.94□□□□□ -1.78
CCDC65Q8IXS2 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.94□□□□□ -1.78
CCDC65Q8IXS2 BNIP3P38-201ENST00000601117 544 ntBASIC3.94□□□□□ -1.78
CCDC65Q8IXS2 AL121772.2-201ENST00000614331 297 ntBASIC3.94□□□□□ -1.78
CCDC65Q8IXS2 AC104307.1-201ENST00000616142 196 ntBASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 122.2 ms