Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC3.53□□□□□ -1.84
C9orf40Q8IXQ3 AC011492.1-201ENST00000600023 315 ntBASIC3.53□□□□□ -1.84
C9orf40Q8IXQ3 AL034351.1-201ENST00000605288 668 ntBASIC3.53□□□□□ -1.84
C9orf40Q8IXQ3 AC092953.2-201ENST00000608000 699 ntBASIC3.53□□□□□ -1.84
C9orf40Q8IXQ3 AC018926.3-201ENST00000618841 406 ntBASIC3.53□□□□□ -1.84
C9orf40Q8IXQ3 AC022079.2-201ENST00000619739 566 ntBASIC3.53□□□□□ -1.84
C9orf40Q8IXQ3 AC079684.1-201ENST00000621405 437 ntBASIC3.53□□□□□ -1.84
C9orf40Q8IXQ3 AL161637.1-201ENST00000622380 412 ntBASIC3.53□□□□□ -1.84
C9orf40Q8IXQ3 AL590396.4-201ENST00000636779 956 ntBASIC3.53□□□□□ -1.84
C9orf40Q8IXQ3 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.53□□□□□ -1.84
C9orf40Q8IXQ3 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
C9orf40Q8IXQ3 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC3.53□□□□□ -1.85
C9orf40Q8IXQ3 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.85
C9orf40Q8IXQ3 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.52□□□□□ -1.85
C9orf40Q8IXQ3 ASNSP1-204ENST00000641977 1664 ntBASIC3.52□□□□□ -1.85
C9orf40Q8IXQ3 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC3.52□□□□□ -1.85
C9orf40Q8IXQ3 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
C9orf40Q8IXQ3 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
C9orf40Q8IXQ3 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
C9orf40Q8IXQ3 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
C9orf40Q8IXQ3 RNU6-1257P-201ENST00000384625 110 ntBASIC3.52□□□□□ -1.85
C9orf40Q8IXQ3 MIR134-201ENST00000385258 73 ntBASIC3.52□□□□□ -1.85
C9orf40Q8IXQ3 MTND2P15-201ENST00000418575 892 ntBASIC3.52□□□□□ -1.85
C9orf40Q8IXQ3 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC3.52□□□□□ -1.85
C9orf40Q8IXQ3 RPS6P14-201ENST00000425165 719 ntBASIC3.52□□□□□ -1.85
C9orf40Q8IXQ3 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC3.52□□□□□ -1.85
C9orf40Q8IXQ3 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC3.52□□□□□ -1.85
C9orf40Q8IXQ3 AL591419.1-201ENST00000427423 339 ntBASIC3.52□□□□□ -1.85
C9orf40Q8IXQ3 NPM1P34-201ENST00000428821 893 ntBASIC3.52□□□□□ -1.85
C9orf40Q8IXQ3 TRBV26OR9-2-201ENST00000432077 293 ntBASIC3.52□□□□□ -1.85
C9orf40Q8IXQ3 HMGB1P45-201ENST00000435986 653 ntBASIC3.52□□□□□ -1.85
C9orf40Q8IXQ3 SNORA71B-202ENST00000439232 272 ntBASIC3.52□□□□□ -1.85
C9orf40Q8IXQ3 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC3.52□□□□□ -1.85
C9orf40Q8IXQ3 AL929288.2-201ENST00000446368 407 ntBASIC3.52□□□□□ -1.85
C9orf40Q8IXQ3 AC096992.1-201ENST00000459808 709 ntBASIC3.52□□□□□ -1.85
C9orf40Q8IXQ3 AC011037.1-201ENST00000483964 558 ntBASIC3.52□□□□□ -1.85
C9orf40Q8IXQ3 FTH1P24-201ENST00000503502 462 ntBASIC3.52□□□□□ -1.85
C9orf40Q8IXQ3 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC3.52□□□□□ -1.85
C9orf40Q8IXQ3 AC008802.1-201ENST00000519121 791 ntBASIC3.52□□□□□ -1.85
C9orf40Q8IXQ3 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC3.52□□□□□ -1.85
C9orf40Q8IXQ3 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC3.52□□□□□ -1.85
C9orf40Q8IXQ3 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.52□□□□□ -1.85
C9orf40Q8IXQ3 AC092851.1-201ENST00000535964 478 ntBASIC3.52□□□□□ -1.85
C9orf40Q8IXQ3 AL442163.2-201ENST00000553912 710 ntBASIC3.52□□□□□ -1.85
C9orf40Q8IXQ3 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC3.52□□□□□ -1.85
C9orf40Q8IXQ3 MIR4512-201ENST00000583257 77 ntBASIC3.52□□□□□ -1.85
C9orf40Q8IXQ3 AC006130.2-201ENST00000586202 326 ntBASIC3.52□□□□□ -1.85
C9orf40Q8IXQ3 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC3.52□□□□□ -1.85
C9orf40Q8IXQ3 VN1R88P-201ENST00000596787 292 ntBASIC3.52□□□□□ -1.85
C9orf40Q8IXQ3 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC3.52□□□□□ -1.85
C9orf40Q8IXQ3 AC069304.3-201ENST00000603938 1084 ntBASIC3.52□□□□□ -1.85
C9orf40Q8IXQ3 AC099785.1-201ENST00000605697 437 ntBASIC3.52□□□□□ -1.85
C9orf40Q8IXQ3 AP003392.5-201ENST00000607857 415 ntBASIC3.52□□□□□ -1.85
C9orf40Q8IXQ3 AL354760.1-201ENST00000608357 643 ntBASIC3.52□□□□□ -1.85
C9orf40Q8IXQ3 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.52□□□□□ -1.85
C9orf40Q8IXQ3 AL512427.1-201ENST00000618593 349 ntBASIC3.52□□□□□ -1.85
C9orf40Q8IXQ3 AC126544.2-201ENST00000625174 749 ntBASIC3.52□□□□□ -1.85
C9orf40Q8IXQ3 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
C9orf40Q8IXQ3 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
C9orf40Q8IXQ3 BDP1P-201ENST00000582658 1990 ntBASIC3.52□□□□□ -1.85
C9orf40Q8IXQ3 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC3.52□□□□□ -1.85
C9orf40Q8IXQ3 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.52□□□□□ -1.85
C9orf40Q8IXQ3 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
C9orf40Q8IXQ3 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC3.52□□□□□ -1.85
C9orf40Q8IXQ3 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.51□□□□□ -1.85
C9orf40Q8IXQ3 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.51□□□□□ -1.85
C9orf40Q8IXQ3 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
C9orf40Q8IXQ3 MTND4P9-201ENST00000507819 1346 ntBASIC3.51□□□□□ -1.85
C9orf40Q8IXQ3 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
C9orf40Q8IXQ3 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.51□□□□□ -1.85
C9orf40Q8IXQ3 U8.11-201ENST00000384699 133 ntBASIC3.51□□□□□ -1.85
C9orf40Q8IXQ3 U8.12-201ENST00000384701 133 ntBASIC3.51□□□□□ -1.85
C9orf40Q8IXQ3 MIR620-201ENST00000385232 95 ntBASIC3.51□□□□□ -1.85
C9orf40Q8IXQ3 RNU6-1000P-201ENST00000391066 106 ntBASIC3.51□□□□□ -1.85
C9orf40Q8IXQ3 RN7SKP202-201ENST00000410439 330 ntBASIC3.51□□□□□ -1.85
C9orf40Q8IXQ3 RNU6-77P-201ENST00000410554 91 ntBASIC3.51□□□□□ -1.85
C9orf40Q8IXQ3 SNORA57.3-201ENST00000411095 141 ntBASIC3.51□□□□□ -1.85
C9orf40Q8IXQ3 TRIM60P5Y-201ENST00000413946 574 ntBASIC3.51□□□□□ -1.85
C9orf40Q8IXQ3 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC3.51□□□□□ -1.85
C9orf40Q8IXQ3 AL139247.1-201ENST00000422768 325 ntBASIC3.51□□□□□ -1.85
C9orf40Q8IXQ3 TRIM60P3Y-201ENST00000432201 673 ntBASIC3.51□□□□□ -1.85
C9orf40Q8IXQ3 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.51□□□□□ -1.85
C9orf40Q8IXQ3 AC011242.1-201ENST00000433596 1158 ntBASIC3.51□□□□□ -1.85
C9orf40Q8IXQ3 RPS26P40-201ENST00000435209 294 ntBASIC3.51□□□□□ -1.85
C9orf40Q8IXQ3 AC002542.1-201ENST00000440683 193 ntBASIC3.51□□□□□ -1.85
C9orf40Q8IXQ3 RRM2P4-201ENST00000441721 562 ntBASIC3.51□□□□□ -1.85
C9orf40Q8IXQ3 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC3.51□□□□□ -1.85
C9orf40Q8IXQ3 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC3.51□□□□□ -1.85
C9orf40Q8IXQ3 SEPT14P24-201ENST00000447236 180 ntBASIC3.51□□□□□ -1.85
C9orf40Q8IXQ3 HMGB3P21-201ENST00000452483 547 ntBASIC3.51□□□□□ -1.85
C9orf40Q8IXQ3 NANOGP10-201ENST00000453325 895 ntBASIC3.51□□□□□ -1.85
C9orf40Q8IXQ3 BX248409.1-201ENST00000455497 255 ntBASIC3.51□□□□□ -1.85
C9orf40Q8IXQ3 NDUFAF4P3-201ENST00000456468 525 ntBASIC3.51□□□□□ -1.85
C9orf40Q8IXQ3 CDC42P1-201ENST00000456658 548 ntBASIC3.51□□□□□ -1.85
C9orf40Q8IXQ3 U8.18-201ENST00000459285 133 ntBASIC3.51□□□□□ -1.85
C9orf40Q8IXQ3 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC3.51□□□□□ -1.85
C9orf40Q8IXQ3 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC3.51□□□□□ -1.85
C9orf40Q8IXQ3 AC108941.1-201ENST00000502853 530 ntBASIC3.51□□□□□ -1.85
C9orf40Q8IXQ3 PRELID3BP7-201ENST00000503606 469 ntBASIC3.51□□□□□ -1.85
C9orf40Q8IXQ3 RNA5SP164-201ENST00000516533 110 ntBASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 152.6 ms