Protein–RNA interactions for Protein: Q12947

FOXF2, Forkhead box protein F2, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXF2Q12947 TRAV15-201ENST00000556680 249 ntBASIC4.42□□□□□ -1.7
FOXF2Q12947 AC022884.2-201ENST00000578535 580 ntBASIC4.42□□□□□ -1.7
FOXF2Q12947 MIR4737-201ENST00000583979 81 ntBASIC4.42□□□□□ -1.7
FOXF2Q12947 AC008536.2-201ENST00000607284 349 ntBASIC4.42□□□□□ -1.7
FOXF2Q12947 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC4.42□□□□□ -1.7
FOXF2Q12947 AP001521.2-201ENST00000608772 546 ntBASIC4.42□□□□□ -1.7
FOXF2Q12947 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC4.42□□□□□ -1.7
FOXF2Q12947 uc_338.18-201ENST00000615451 175 ntBASIC4.42□□□□□ -1.7
FOXF2Q12947 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC4.42□□□□□ -1.7
FOXF2Q12947 FRG1KP-201ENST00000623592 341 ntBASIC4.42□□□□□ -1.7
FOXF2Q12947 ATE1-AS1-202ENST00000636460 506 ntBASIC4.42□□□□□ -1.7
FOXF2Q12947 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
FOXF2Q12947 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC4.42□□□□□ -1.7
FOXF2Q12947 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC4.42□□□□□ -1.7
FOXF2Q12947 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
FOXF2Q12947 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC4.41□□□□□ -1.7
FOXF2Q12947 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
FOXF2Q12947 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
FOXF2Q12947 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
FOXF2Q12947 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC4.41□□□□□ -1.7
FOXF2Q12947 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
FOXF2Q12947 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
FOXF2Q12947 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC4.41□□□□□ -1.7
FOXF2Q12947 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
FOXF2Q12947 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
FOXF2Q12947 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
FOXF2Q12947 FHIT-201ENST00000341848 174 ntTSL 3 BASIC4.41□□□□□ -1.7
FOXF2Q12947 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
FOXF2Q12947 SNORD116-23-201ENST00000384645 92 ntBASIC4.41□□□□□ -1.7
FOXF2Q12947 HMGB3P7-201ENST00000400214 611 ntBASIC4.41□□□□□ -1.7
FOXF2Q12947 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
FOXF2Q12947 RNU6-248P-201ENST00000410720 107 ntBASIC4.41□□□□□ -1.7
FOXF2Q12947 RPS20P15-201ENST00000412792 311 ntBASIC4.41□□□□□ -1.7
FOXF2Q12947 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC4.41□□□□□ -1.7
FOXF2Q12947 AL136133.1-201ENST00000413694 376 ntBASIC4.41□□□□□ -1.7
FOXF2Q12947 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC4.41□□□□□ -1.7
FOXF2Q12947 IGKV1OR9-1-201ENST00000424370 284 ntBASIC4.41□□□□□ -1.7
FOXF2Q12947 ELOCP14-201ENST00000428070 331 ntBASIC4.41□□□□□ -1.7
FOXF2Q12947 RPL7P4-203ENST00000430239 730 ntBASIC4.41□□□□□ -1.7
FOXF2Q12947 ZYG11AP1-201ENST00000430329 837 ntBASIC4.41□□□□□ -1.7
FOXF2Q12947 AC093414.1-201ENST00000434712 514 ntBASIC4.41□□□□□ -1.7
FOXF2Q12947 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC4.41□□□□□ -1.7
FOXF2Q12947 ELOCP7-201ENST00000439968 331 ntBASIC4.41□□□□□ -1.7
FOXF2Q12947 RPS29P9-201ENST00000440360 171 ntBASIC4.41□□□□□ -1.7
FOXF2Q12947 CEACAMP9-201ENST00000442990 513 ntBASIC4.41□□□□□ -1.7
FOXF2Q12947 H2AFZP6-201ENST00000444403 394 ntBASIC4.41□□□□□ -1.7
FOXF2Q12947 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC4.41□□□□□ -1.7
FOXF2Q12947 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC4.41□□□□□ -1.7
FOXF2Q12947 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC4.41□□□□□ -1.7
FOXF2Q12947 HMGB1P4-201ENST00000455362 567 ntBASIC4.41□□□□□ -1.7
FOXF2Q12947 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC4.41□□□□□ -1.7
FOXF2Q12947 RPS20P24-201ENST00000457473 361 ntBASIC4.41□□□□□ -1.7
FOXF2Q12947 AP000797.1-201ENST00000478870 387 ntBASIC4.41□□□□□ -1.7
FOXF2Q12947 AC008897.1-201ENST00000494006 347 ntBASIC4.41□□□□□ -1.7
FOXF2Q12947 RNF138P1-201ENST00000502765 546 ntBASIC4.41□□□□□ -1.7
FOXF2Q12947 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC4.41□□□□□ -1.7
FOXF2Q12947 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC4.41□□□□□ -1.7
FOXF2Q12947 AC016559.2-201ENST00000510759 359 ntBASIC4.41□□□□□ -1.7
FOXF2Q12947 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC4.41□□□□□ -1.7
FOXF2Q12947 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC4.41□□□□□ -1.7
FOXF2Q12947 AC087276.1-201ENST00000529659 480 ntBASIC4.41□□□□□ -1.7
FOXF2Q12947 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
FOXF2Q12947 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC4.41□□□□□ -1.7
FOXF2Q12947 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC4.41□□□□□ -1.7
FOXF2Q12947 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC4.41□□□□□ -1.7
FOXF2Q12947 NELL2-211ENST00000548826 559 ntTSL 2 BASIC4.41□□□□□ -1.7
FOXF2Q12947 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC4.41□□□□□ -1.7
FOXF2Q12947 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC4.41□□□□□ -1.7
FOXF2Q12947 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC4.41□□□□□ -1.7
FOXF2Q12947 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC4.41□□□□□ -1.7
FOXF2Q12947 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC4.41□□□□□ -1.7
FOXF2Q12947 AC233280.2-201ENST00000603917 1070 ntBASIC4.41□□□□□ -1.7
FOXF2Q12947 AP001836.1-201ENST00000604675 523 ntBASIC4.41□□□□□ -1.7
FOXF2Q12947 AC055876.5-201ENST00000605667 259 ntBASIC4.41□□□□□ -1.7
FOXF2Q12947 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC4.41□□□□□ -1.7
FOXF2Q12947 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC4.41□□□□□ -1.7
FOXF2Q12947 AC018926.3-201ENST00000618841 406 ntBASIC4.41□□□□□ -1.7
FOXF2Q12947 AC092650.2-201ENST00000619984 902 ntBASIC4.41□□□□□ -1.7
FOXF2Q12947 AP000648.2-201ENST00000624182 404 ntBASIC4.41□□□□□ -1.7
FOXF2Q12947 MIR6863-201ENST00000636112 90 ntBASIC4.41□□□□□ -1.7
FOXF2Q12947 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC4.41□□□□□ -1.7
FOXF2Q12947 MAPK10-328ENST00000641553 4009 ntBASIC4.41□□□□□ -1.7
FOXF2Q12947 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
FOXF2Q12947 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC4.41□□□□□ -1.7
FOXF2Q12947 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC4.41□□□□□ -1.7
FOXF2Q12947 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
FOXF2Q12947 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
FOXF2Q12947 OR5BR1P-201ENST00000524992 1330 ntBASIC4.41□□□□□ -1.7
FOXF2Q12947 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
FOXF2Q12947 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
FOXF2Q12947 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
FOXF2Q12947 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC4.4□□□□□ -1.7
FOXF2Q12947 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC4.4□□□□□ -1.7
FOXF2Q12947 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.7
FOXF2Q12947 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
FOXF2Q12947 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
FOXF2Q12947 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC4.4□□□□□ -1.7
FOXF2Q12947 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.7
FOXF2Q12947 RNU6-492P-201ENST00000363035 104 ntBASIC4.4□□□□□ -1.71
FOXF2Q12947 Y_RNA.160-201ENST00000363677 92 ntBASIC4.4□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms