Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC3.43□□□□□ -1.86
HMGCS1Q01581 AL513321.1-201ENST00000441175 761 ntBASIC3.43□□□□□ -1.86
HMGCS1Q01581 AC007000.2-201ENST00000442564 487 ntBASIC3.43□□□□□ -1.86
HMGCS1Q01581 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC3.43□□□□□ -1.86
HMGCS1Q01581 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC3.43□□□□□ -1.86
HMGCS1Q01581 RPL34P26-201ENST00000445636 354 ntBASIC3.43□□□□□ -1.86
HMGCS1Q01581 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.43□□□□□ -1.86
HMGCS1Q01581 CEACAMP4-201ENST00000457676 421 ntBASIC3.43□□□□□ -1.86
HMGCS1Q01581 U8.18-201ENST00000459285 133 ntBASIC3.43□□□□□ -1.86
HMGCS1Q01581 NFU1-207ENST00000462320 558 ntTSL 4 BASIC3.43□□□□□ -1.86
HMGCS1Q01581 ACTG1P13-201ENST00000486987 1043 ntBASIC3.43□□□□□ -1.86
HMGCS1Q01581 PDLIM1P4-201ENST00000504327 1006 ntBASIC3.43□□□□□ -1.86
HMGCS1Q01581 PCBP2P3-201ENST00000509726 843 ntBASIC3.43□□□□□ -1.86
HMGCS1Q01581 COL6A4P2-205ENST00000509855 506 ntBASIC3.43□□□□□ -1.86
HMGCS1Q01581 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC3.43□□□□□ -1.86
HMGCS1Q01581 AC010285.3-201ENST00000511668 676 ntBASIC3.43□□□□□ -1.86
HMGCS1Q01581 USP9YP5-201ENST00000511770 630 ntBASIC3.43□□□□□ -1.86
HMGCS1Q01581 RNU6-579P-201ENST00000516879 102 ntBASIC3.43□□□□□ -1.86
HMGCS1Q01581 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC3.43□□□□□ -1.86
HMGCS1Q01581 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC3.43□□□□□ -1.86
HMGCS1Q01581 MTCO1P49-201ENST00000523429 802 ntBASIC3.43□□□□□ -1.86
HMGCS1Q01581 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.43□□□□□ -1.86
HMGCS1Q01581 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.43□□□□□ -1.86
HMGCS1Q01581 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.43□□□□□ -1.86
HMGCS1Q01581 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC3.43□□□□□ -1.86
HMGCS1Q01581 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC3.43□□□□□ -1.86
HMGCS1Q01581 LINC00557-201ENST00000563184 1279 ntBASIC3.43□□□□□ -1.86
HMGCS1Q01581 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC3.43□□□□□ -1.86
HMGCS1Q01581 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC3.43□□□□□ -1.86
HMGCS1Q01581 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC3.43□□□□□ -1.86
HMGCS1Q01581 BNIP3P38-201ENST00000601117 544 ntBASIC3.43□□□□□ -1.86
HMGCS1Q01581 AC110792.4-201ENST00000609843 298 ntBASIC3.43□□□□□ -1.86
HMGCS1Q01581 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC3.43□□□□□ -1.86
HMGCS1Q01581 AL161637.1-201ENST00000622380 412 ntBASIC3.43□□□□□ -1.86
HMGCS1Q01581 AP006248.3-201ENST00000623580 594 ntBASIC3.43□□□□□ -1.86
HMGCS1Q01581 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
HMGCS1Q01581 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
HMGCS1Q01581 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.43□□□□□ -1.86
HMGCS1Q01581 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
HMGCS1Q01581 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
HMGCS1Q01581 POMP-202ENST00000460403 1428 ntTSL 3 BASIC3.43□□□□□ -1.86
HMGCS1Q01581 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
HMGCS1Q01581 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
HMGCS1Q01581 SNORD6-201ENST00000365444 73 ntBASIC3.42□□□□□ -1.86
HMGCS1Q01581 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
HMGCS1Q01581 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
HMGCS1Q01581 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC3.42□□□□□ -1.86
HMGCS1Q01581 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC3.42□□□□□ -1.86
HMGCS1Q01581 MIR554-201ENST00000384874 96 ntBASIC3.42□□□□□ -1.86
HMGCS1Q01581 AL138878.1-201ENST00000405131 347 ntBASIC3.42□□□□□ -1.86
HMGCS1Q01581 RNU6ATAC-201ENST00000408749 126 ntBASIC3.42□□□□□ -1.86
HMGCS1Q01581 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.42□□□□□ -1.86
HMGCS1Q01581 MTCO3P4-201ENST00000419236 787 ntBASIC3.42□□□□□ -1.86
HMGCS1Q01581 RPL31P45-201ENST00000419532 356 ntBASIC3.42□□□□□ -1.86
HMGCS1Q01581 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.42□□□□□ -1.86
HMGCS1Q01581 PTP4A1P5-201ENST00000420305 455 ntBASIC3.42□□□□□ -1.86
HMGCS1Q01581 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC3.42□□□□□ -1.86
HMGCS1Q01581 MTND4P15-201ENST00000437913 1033 ntBASIC3.42□□□□□ -1.86
HMGCS1Q01581 MED6P1-201ENST00000439659 713 ntBASIC3.42□□□□□ -1.86
HMGCS1Q01581 CDC27P1-201ENST00000445384 715 ntBASIC3.42□□□□□ -1.86
HMGCS1Q01581 MRPS31P2-201ENST00000451581 518 ntBASIC3.42□□□□□ -1.86
HMGCS1Q01581 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC3.42□□□□□ -1.86
HMGCS1Q01581 NIPA2P2-201ENST00000496376 1083 ntBASIC3.42□□□□□ -1.86
HMGCS1Q01581 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC3.42□□□□□ -1.86
HMGCS1Q01581 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.42□□□□□ -1.86
HMGCS1Q01581 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC3.42□□□□□ -1.86
HMGCS1Q01581 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.42□□□□□ -1.86
HMGCS1Q01581 RNU2-27P-201ENST00000516185 142 ntBASIC3.42□□□□□ -1.86
HMGCS1Q01581 RNU1-45P-201ENST00000517191 141 ntBASIC3.42□□□□□ -1.86
HMGCS1Q01581 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.42□□□□□ -1.86
HMGCS1Q01581 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC3.42□□□□□ -1.86
HMGCS1Q01581 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
HMGCS1Q01581 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.42□□□□□ -1.86
HMGCS1Q01581 AC091515.1-201ENST00000548110 679 ntBASIC3.42□□□□□ -1.86
HMGCS1Q01581 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.42□□□□□ -1.86
HMGCS1Q01581 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC3.42□□□□□ -1.86
HMGCS1Q01581 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC3.42□□□□□ -1.86
HMGCS1Q01581 AC233266.2-201ENST00000567067 528 ntBASIC3.42□□□□□ -1.86
HMGCS1Q01581 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC3.42□□□□□ -1.86
HMGCS1Q01581 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC3.42□□□□□ -1.86
HMGCS1Q01581 Z82195.1-201ENST00000604558 398 ntBASIC3.42□□□□□ -1.86
HMGCS1Q01581 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC3.42□□□□□ -1.86
HMGCS1Q01581 RNVU1-4-201ENST00000612985 164 ntBASIC3.42□□□□□ -1.86
HMGCS1Q01581 MIR1264-201ENST00000616374 69 ntBASIC3.42□□□□□ -1.86
HMGCS1Q01581 AC022149.2-201ENST00000621061 203 ntBASIC3.42□□□□□ -1.86
HMGCS1Q01581 AL356863.1-201ENST00000623378 1080 ntBASIC3.42□□□□□ -1.86
HMGCS1Q01581 AC073592.7-201ENST00000623659 507 ntBASIC3.42□□□□□ -1.86
HMGCS1Q01581 AC091948.2-201ENST00000636510 279 ntBASIC3.42□□□□□ -1.86
HMGCS1Q01581 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
HMGCS1Q01581 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
HMGCS1Q01581 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.42□□□□□ -1.86
HMGCS1Q01581 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
HMGCS1Q01581 AC007823.1-201ENST00000569932 1566 ntBASIC3.42□□□□□ -1.86
HMGCS1Q01581 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.41□□□□□ -1.86
HMGCS1Q01581 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
HMGCS1Q01581 MTND4P10-201ENST00000446199 1363 ntBASIC3.41□□□□□ -1.86
HMGCS1Q01581 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
HMGCS1Q01581 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
HMGCS1Q01581 RNA5SP51-201ENST00000364750 119 ntBASIC3.41□□□□□ -1.86
HMGCS1Q01581 AC007066.1-201ENST00000392902 381 ntBASIC3.41□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 114 ms