Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 ZNF415P1-201ENST00000582279 1166 ntBASIC4.43□□□□□ -1.7
RAE1P78406 MIR4637-201ENST00000582405 84 ntBASIC4.43□□□□□ -1.7
RAE1P78406 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC4.43□□□□□ -1.7
RAE1P78406 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC4.43□□□□□ -1.7
RAE1P78406 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC4.43□□□□□ -1.7
RAE1P78406 DEFB131E-202ENST00000602581 683 ntBASIC4.43□□□□□ -1.7
RAE1P78406 AL391358.1-201ENST00000605342 190 ntBASIC4.43□□□□□ -1.7
RAE1P78406 AC068276.1-201ENST00000605793 379 ntBASIC4.43□□□□□ -1.7
RAE1P78406 AC092354.2-201ENST00000607786 514 ntBASIC4.43□□□□□ -1.7
RAE1P78406 AC078899.5-201ENST00000612475 178 ntBASIC4.43□□□□□ -1.7
RAE1P78406 AC100793.4-201ENST00000613683 429 ntBASIC4.43□□□□□ -1.7
RAE1P78406 MIR7155-201ENST00000615925 56 ntBASIC4.43□□□□□ -1.7
RAE1P78406 AC090510.2-201ENST00000617465 629 ntBASIC4.43□□□□□ -1.7
RAE1P78406 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC4.43□□□□□ -1.7
RAE1P78406 AL356596.1-201ENST00000624230 379 ntBASIC4.43□□□□□ -1.7
RAE1P78406 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC4.43□□□□□ -1.7
RAE1P78406 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC4.43□□□□□ -1.7
RAE1P78406 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC4.43□□□□□ -1.7
RAE1P78406 AL136164.3-201ENST00000624429 3978 ntBASIC4.43□□□□□ -1.7
RAE1P78406 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
RAE1P78406 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
RAE1P78406 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
RAE1P78406 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC4.43□□□□□ -1.7
RAE1P78406 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC4.43□□□□□ -1.7
RAE1P78406 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.43□□□□□ -1.7
RAE1P78406 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
RAE1P78406 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.43□□□□□ -1.7
RAE1P78406 AC108751.5-201ENST00000492880 1336 ntBASIC4.43□□□□□ -1.7
RAE1P78406 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
RAE1P78406 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
RAE1P78406 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
RAE1P78406 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
RAE1P78406 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
RAE1P78406 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
RAE1P78406 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
RAE1P78406 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
RAE1P78406 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
RAE1P78406 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC4.42□□□□□ -1.7
RAE1P78406 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
RAE1P78406 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
RAE1P78406 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
RAE1P78406 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
RAE1P78406 FGF7P2-201ENST00000332473 296 ntBASIC4.42□□□□□ -1.7
RAE1P78406 RNA5SP391-201ENST00000363456 119 ntBASIC4.42□□□□□ -1.7
RAE1P78406 RNU1-85P-201ENST00000364127 164 ntBASIC4.42□□□□□ -1.7
RAE1P78406 RNA5SP151-201ENST00000365632 117 ntBASIC4.42□□□□□ -1.7
RAE1P78406 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
RAE1P78406 HMGB1P17-201ENST00000403495 628 ntBASIC4.42□□□□□ -1.7
RAE1P78406 Y_RNA.599-201ENST00000410489 109 ntBASIC4.42□□□□□ -1.7
RAE1P78406 AL133384.1-201ENST00000412744 351 ntBASIC4.42□□□□□ -1.7
RAE1P78406 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC4.42□□□□□ -1.7
RAE1P78406 CDK8P2-201ENST00000415020 547 ntBASIC4.42□□□□□ -1.7
RAE1P78406 AC140479.3-201ENST00000418944 1126 ntBASIC4.42□□□□□ -1.7
RAE1P78406 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.42□□□□□ -1.7
RAE1P78406 AC096632.1-201ENST00000427395 310 ntBASIC4.42□□□□□ -1.7
RAE1P78406 AL365184.2-201ENST00000431139 435 ntBASIC4.42□□□□□ -1.7
RAE1P78406 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC4.42□□□□□ -1.7
RAE1P78406 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC4.42□□□□□ -1.7
RAE1P78406 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC4.42□□□□□ -1.7
RAE1P78406 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC4.42□□□□□ -1.7
RAE1P78406 RPL23AP16-201ENST00000441715 421 ntBASIC4.42□□□□□ -1.7
RAE1P78406 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC4.42□□□□□ -1.7
RAE1P78406 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC4.42□□□□□ -1.7
RAE1P78406 H2AFZP5-201ENST00000446960 382 ntBASIC4.42□□□□□ -1.7
RAE1P78406 EEF1E1P1-201ENST00000446998 430 ntBASIC4.42□□□□□ -1.7
RAE1P78406 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC4.42□□□□□ -1.7
RAE1P78406 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC4.42□□□□□ -1.7
RAE1P78406 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
RAE1P78406 RNA5SP269-201ENST00000459032 137 ntBASIC4.42□□□□□ -1.7
RAE1P78406 TSACC-207ENST00000470342 601 ntTSL 2 BASIC4.42□□□□□ -1.7
RAE1P78406 RPS15AP17-201ENST00000470598 390 ntBASIC4.42□□□□□ -1.7
RAE1P78406 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC4.42□□□□□ -1.7
RAE1P78406 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC4.42□□□□□ -1.7
RAE1P78406 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC4.42□□□□□ -1.7
RAE1P78406 AC109458.1-201ENST00000508858 316 ntBASIC4.42□□□□□ -1.7
RAE1P78406 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC4.42□□□□□ -1.7
RAE1P78406 AC026412.2-201ENST00000512270 1075 ntBASIC4.42□□□□□ -1.7
RAE1P78406 RNA5SP228-201ENST00000516232 133 ntBASIC4.42□□□□□ -1.7
RAE1P78406 RN7SKP276-201ENST00000516242 268 ntBASIC4.42□□□□□ -1.7
RAE1P78406 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC4.42□□□□□ -1.7
RAE1P78406 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
RAE1P78406 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC4.42□□□□□ -1.7
RAE1P78406 AL110118.1-201ENST00000553543 400 ntBASIC4.42□□□□□ -1.7
RAE1P78406 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC4.42□□□□□ -1.7
RAE1P78406 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC4.42□□□□□ -1.7
RAE1P78406 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC4.42□□□□□ -1.7
RAE1P78406 OR1F2P-201ENST00000570470 933 ntBASIC4.42□□□□□ -1.7
RAE1P78406 MIR4646-201ENST00000580775 63 ntBASIC4.42□□□□□ -1.7
RAE1P78406 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.42□□□□□ -1.7
RAE1P78406 AC073091.2-201ENST00000603205 907 ntBASIC4.42□□□□□ -1.7
RAE1P78406 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC4.42□□□□□ -1.7
RAE1P78406 HSPE1P14-201ENST00000605812 302 ntBASIC4.42□□□□□ -1.7
RAE1P78406 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC4.42□□□□□ -1.7
RAE1P78406 AC239868.4-201ENST00000608318 671 ntBASIC4.42□□□□□ -1.7
RAE1P78406 AL359535.1-201ENST00000612100 1087 ntBASIC4.42□□□□□ -1.7
RAE1P78406 AC010678.1-201ENST00000614118 713 ntBASIC4.42□□□□□ -1.7
RAE1P78406 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC4.42□□□□□ -1.7
RAE1P78406 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.42□□□□□ -1.7
RAE1P78406 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC4.42□□□□□ -1.7
RAE1P78406 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms