Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
YBX1P67809 AC108467.2-201ENST00000617640 1597 ntBASIC5.32□□□□□ -1.56
YBX1P67809 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
YBX1P67809 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
YBX1P67809 OFD1P5Y-201ENST00000447585 2590 ntBASIC5.32□□□□□ -1.56
YBX1P67809 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
YBX1P67809 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
YBX1P67809 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
YBX1P67809 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
YBX1P67809 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
YBX1P67809 AC024560.2-201ENST00000507981 1497 ntBASIC5.32□□□□□ -1.56
YBX1P67809 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC5.32□□□□□ -1.56
YBX1P67809 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
YBX1P67809 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
YBX1P67809 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
YBX1P67809 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
YBX1P67809 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.31□□□□□ -1.56
YBX1P67809 AFP-201ENST00000226359 1914 ntTSL 5 BASIC5.31□□□□□ -1.56
YBX1P67809 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC5.31□□□□□ -1.56
YBX1P67809 OR11H5P-202ENST00000641612 1325 ntBASIC5.31□□□□□ -1.56
YBX1P67809 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
YBX1P67809 Y_RNA.132-201ENST00000363421 102 ntBASIC5.31□□□□□ -1.56
YBX1P67809 Y_RNA.157-201ENST00000363638 102 ntBASIC5.31□□□□□ -1.56
YBX1P67809 Y_RNA.381-201ENST00000365666 102 ntBASIC5.31□□□□□ -1.56
YBX1P67809 RNU6-769P-201ENST00000384407 104 ntBASIC5.31□□□□□ -1.56
YBX1P67809 MIR606-201ENST00000384851 96 ntBASIC5.31□□□□□ -1.56
YBX1P67809 AL391361.1-201ENST00000405580 489 ntBASIC5.31□□□□□ -1.56
YBX1P67809 RNU6-272P-201ENST00000411028 104 ntBASIC5.31□□□□□ -1.56
YBX1P67809 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC5.31□□□□□ -1.56
YBX1P67809 RNF10P1-201ENST00000418589 369 ntBASIC5.31□□□□□ -1.56
YBX1P67809 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC5.31□□□□□ -1.56
YBX1P67809 AL592293.2-201ENST00000422292 996 ntBASIC5.31□□□□□ -1.56
YBX1P67809 MTCO2P5-201ENST00000422621 426 ntBASIC5.31□□□□□ -1.56
YBX1P67809 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC5.31□□□□□ -1.56
YBX1P67809 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC5.31□□□□□ -1.56
YBX1P67809 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.31□□□□□ -1.56
YBX1P67809 RPS27P18-201ENST00000431701 247 ntBASIC5.31□□□□□ -1.56
YBX1P67809 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC5.31□□□□□ -1.56
YBX1P67809 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC5.31□□□□□ -1.56
YBX1P67809 CBWD4P-201ENST00000445695 655 ntBASIC5.31□□□□□ -1.56
YBX1P67809 MRPL50P4-201ENST00000446432 475 ntBASIC5.31□□□□□ -1.56
YBX1P67809 RPL7P12-201ENST00000446719 750 ntBASIC5.31□□□□□ -1.56
YBX1P67809 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC5.31□□□□□ -1.56
YBX1P67809 HIGD1AP6-201ENST00000521833 279 ntBASIC5.31□□□□□ -1.56
YBX1P67809 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC5.31□□□□□ -1.56
YBX1P67809 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC5.31□□□□□ -1.56
YBX1P67809 PHBP17-201ENST00000528576 541 ntBASIC5.31□□□□□ -1.56
YBX1P67809 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC5.31□□□□□ -1.56
YBX1P67809 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC5.31□□□□□ -1.56
YBX1P67809 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC5.31□□□□□ -1.56
YBX1P67809 BCRP9-201ENST00000605312 388 ntBASIC5.31□□□□□ -1.56
YBX1P67809 AC116312.1-201ENST00000606841 314 ntBASIC5.31□□□□□ -1.56
YBX1P67809 AL139124.1-201ENST00000609123 421 ntBASIC5.31□□□□□ -1.56
YBX1P67809 AP001521.1-201ENST00000609150 300 ntBASIC5.31□□□□□ -1.56
YBX1P67809 AL603758.1-201ENST00000618654 241 ntBASIC5.31□□□□□ -1.56
YBX1P67809 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC5.31□□□□□ -1.56
YBX1P67809 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC5.31□□□□□ -1.56
YBX1P67809 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC5.31□□□□□ -1.56
YBX1P67809 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
YBX1P67809 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
YBX1P67809 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
YBX1P67809 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
YBX1P67809 AL034549.2-201ENST00000618285 3373 ntBASIC5.31□□□□□ -1.56
YBX1P67809 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.31□□□□□ -1.56
YBX1P67809 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC5.31□□□□□ -1.56
YBX1P67809 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC5.31□□□□□ -1.56
YBX1P67809 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC5.31□□□□□ -1.56
YBX1P67809 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
YBX1P67809 ADAM5-202ENST00000399789 1942 ntBASIC5.31□□□□□ -1.56
YBX1P67809 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
YBX1P67809 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
YBX1P67809 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC5.3□□□□□ -1.56
YBX1P67809 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
YBX1P67809 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.3□□□□□ -1.56
YBX1P67809 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
YBX1P67809 CKAP2P1-201ENST00000555477 2049 ntBASIC5.3□□□□□ -1.56
YBX1P67809 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
YBX1P67809 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
YBX1P67809 RNF6P1-201ENST00000444889 1784 ntBASIC5.3□□□□□ -1.56
YBX1P67809 AC090017.1-201ENST00000548612 1779 ntBASIC5.3□□□□□ -1.56
YBX1P67809 MTCO1P7-201ENST00000419523 1542 ntBASIC5.3□□□□□ -1.56
YBX1P67809 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
YBX1P67809 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
YBX1P67809 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
YBX1P67809 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
YBX1P67809 Y_RNA.159-201ENST00000363674 87 ntBASIC5.3□□□□□ -1.56
YBX1P67809 RN7SKP6-201ENST00000364795 319 ntBASIC5.3□□□□□ -1.56
YBX1P67809 AL354719.1-201ENST00000406535 843 ntBASIC5.3□□□□□ -1.56
YBX1P67809 AC127391.1-201ENST00000411737 98 ntBASIC5.3□□□□□ -1.56
YBX1P67809 RPL35AP24-201ENST00000413846 330 ntBASIC5.3□□□□□ -1.56
YBX1P67809 RBMY2KP-201ENST00000418221 992 ntBASIC5.3□□□□□ -1.56
YBX1P67809 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC5.3□□□□□ -1.56
YBX1P67809 AL353678.1-201ENST00000422735 741 ntBASIC5.3□□□□□ -1.56
YBX1P67809 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC5.3□□□□□ -1.56
YBX1P67809 RIMKLBP2-201ENST00000424737 654 ntBASIC5.3□□□□□ -1.56
YBX1P67809 RPL35AP12-201ENST00000425362 338 ntBASIC5.3□□□□□ -1.56
YBX1P67809 FTLP19-201ENST00000433300 394 ntBASIC5.3□□□□□ -1.56
YBX1P67809 BRK1P2-201ENST00000442875 223 ntBASIC5.3□□□□□ -1.56
YBX1P67809 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC5.3□□□□□ -1.56
YBX1P67809 BX842559.2-201ENST00000451418 605 ntBASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 152.4 ms