Protein–RNA interactions for Protein: P55344

LIM2, Lens fiber membrane intrinsic protein, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2P55344 RAC1P3-201ENST00000416129 580 ntBASIC3.54□□□□□ -1.84
LIM2P55344 TEX41-203ENST00000420472 765 ntTSL 3 BASIC3.54□□□□□ -1.84
LIM2P55344 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC3.54□□□□□ -1.84
LIM2P55344 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
LIM2P55344 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC3.54□□□□□ -1.84
LIM2P55344 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC3.54□□□□□ -1.84
LIM2P55344 SKP1P1-201ENST00000438081 489 ntBASIC3.54□□□□□ -1.84
LIM2P55344 SEPT14P24-201ENST00000447236 180 ntBASIC3.54□□□□□ -1.84
LIM2P55344 AL162388.1-201ENST00000450912 352 ntBASIC3.54□□□□□ -1.84
LIM2P55344 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC3.54□□□□□ -1.84
LIM2P55344 DNAJC19P8-201ENST00000452887 259 ntBASIC3.54□□□□□ -1.84
LIM2P55344 DNAJC19P1-201ENST00000455312 319 ntBASIC3.54□□□□□ -1.84
LIM2P55344 AL133162.1-201ENST00000463228 453 ntBASIC3.54□□□□□ -1.84
LIM2P55344 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
LIM2P55344 AC091959.2-201ENST00000477363 321 ntBASIC3.54□□□□□ -1.84
LIM2P55344 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
LIM2P55344 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC3.54□□□□□ -1.84
LIM2P55344 OR5H4P-201ENST00000510851 923 ntBASIC3.54□□□□□ -1.84
LIM2P55344 PRELID3BP4-201ENST00000515476 571 ntBASIC3.54□□□□□ -1.84
LIM2P55344 RN7SKP83-201ENST00000516512 178 ntBASIC3.54□□□□□ -1.84
LIM2P55344 RN7SKP96-201ENST00000516948 297 ntBASIC3.54□□□□□ -1.84
LIM2P55344 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC3.54□□□□□ -1.84
LIM2P55344 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
LIM2P55344 AC068339.2-201ENST00000534395 618 ntBASIC3.54□□□□□ -1.84
LIM2P55344 AC139103.1-201ENST00000534696 1030 ntBASIC3.54□□□□□ -1.84
LIM2P55344 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC3.54□□□□□ -1.84
LIM2P55344 AL442163.2-201ENST00000553912 710 ntBASIC3.54□□□□□ -1.84
LIM2P55344 AC006960.3-201ENST00000561845 705 ntBASIC3.54□□□□□ -1.84
LIM2P55344 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC3.54□□□□□ -1.84
LIM2P55344 AC126365.2-201ENST00000580630 379 ntBASIC3.54□□□□□ -1.84
LIM2P55344 MIR5187-201ENST00000583479 76 ntBASIC3.54□□□□□ -1.84
LIM2P55344 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC3.54□□□□□ -1.84
LIM2P55344 AL138955.1-201ENST00000622881 1040 ntBASIC3.54□□□□□ -1.84
LIM2P55344 AC244205.2-202ENST00000635781 342 ntBASIC3.54□□□□□ -1.84
LIM2P55344 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.54□□□□□ -1.84
LIM2P55344 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.54□□□□□ -1.84
LIM2P55344 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
LIM2P55344 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
LIM2P55344 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
LIM2P55344 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
LIM2P55344 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
LIM2P55344 AC012020.1-201ENST00000624541 1728 ntBASIC3.53□□□□□ -1.84
LIM2P55344 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.53□□□□□ -1.84
LIM2P55344 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
LIM2P55344 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.53□□□□□ -1.84
LIM2P55344 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
LIM2P55344 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC3.53□□□□□ -1.84
LIM2P55344 Y_RNA.126-201ENST00000363382 111 ntBASIC3.53□□□□□ -1.84
LIM2P55344 RNU1-64P-201ENST00000365443 163 ntBASIC3.53□□□□□ -1.84
LIM2P55344 AC234772.1-201ENST00000377927 937 ntBASIC3.53□□□□□ -1.84
LIM2P55344 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
LIM2P55344 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC3.53□□□□□ -1.84
LIM2P55344 RNU6-77P-201ENST00000410554 91 ntBASIC3.53□□□□□ -1.84
LIM2P55344 SNORA57.3-201ENST00000411095 141 ntBASIC3.53□□□□□ -1.84
LIM2P55344 AC114814.2-201ENST00000419195 485 ntBASIC3.53□□□□□ -1.84
LIM2P55344 TCEA1P2-201ENST00000420496 906 ntBASIC3.53□□□□□ -1.84
LIM2P55344 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC3.53□□□□□ -1.84
LIM2P55344 RPS7P2-201ENST00000435134 607 ntBASIC3.53□□□□□ -1.84
LIM2P55344 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.53□□□□□ -1.84
LIM2P55344 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC3.53□□□□□ -1.84
LIM2P55344 MTND1P33-201ENST00000446251 917 ntBASIC3.53□□□□□ -1.84
LIM2P55344 AL929288.2-201ENST00000446368 407 ntBASIC3.53□□□□□ -1.84
LIM2P55344 NANOGP10-201ENST00000453325 895 ntBASIC3.53□□□□□ -1.84
LIM2P55344 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC3.53□□□□□ -1.84
LIM2P55344 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC3.53□□□□□ -1.84
LIM2P55344 AC108043.1-201ENST00000512696 574 ntBASIC3.53□□□□□ -1.84
LIM2P55344 MTND4LP31-201ENST00000514859 294 ntBASIC3.53□□□□□ -1.84
LIM2P55344 RN7SKP209-201ENST00000516888 304 ntBASIC3.53□□□□□ -1.84
LIM2P55344 LY96-202ENST00000518893 430 ntTSL 3 BASIC3.53□□□□□ -1.84
LIM2P55344 IGLVIV-53-201ENST00000520107 367 ntBASIC3.53□□□□□ -1.84
LIM2P55344 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC3.53□□□□□ -1.84
LIM2P55344 RGS4-207ENST00000527809 817 ntTSL 4 BASIC3.53□□□□□ -1.84
LIM2P55344 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.53□□□□□ -1.84
LIM2P55344 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.53□□□□□ -1.84
LIM2P55344 RN7SL622P-201ENST00000585292 275 ntBASIC3.53□□□□□ -1.84
LIM2P55344 AC067852.4-201ENST00000590314 478 ntBASIC3.53□□□□□ -1.84
LIM2P55344 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.53□□□□□ -1.84
LIM2P55344 RNU1-30P-201ENST00000606575 163 ntBASIC3.53□□□□□ -1.84
LIM2P55344 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.53□□□□□ -1.84
LIM2P55344 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC3.53□□□□□ -1.84
LIM2P55344 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC3.53□□□□□ -1.84
LIM2P55344 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
LIM2P55344 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
LIM2P55344 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.53□□□□□ -1.84
LIM2P55344 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC3.53□□□□□ -1.84
LIM2P55344 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
LIM2P55344 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC3.52□□□□□ -1.85
LIM2P55344 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
LIM2P55344 OR10J6P-201ENST00000289731 930 ntBASIC3.52□□□□□ -1.85
LIM2P55344 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
LIM2P55344 AL445189.1-201ENST00000405722 338 ntBASIC3.52□□□□□ -1.85
LIM2P55344 RN7SKP159-201ENST00000410657 292 ntBASIC3.52□□□□□ -1.85
LIM2P55344 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC3.52□□□□□ -1.85
LIM2P55344 AC092017.2-201ENST00000427600 362 ntBASIC3.52□□□□□ -1.85
LIM2P55344 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC3.52□□□□□ -1.85
LIM2P55344 AC105402.2-201ENST00000438503 358 ntBASIC3.52□□□□□ -1.85
LIM2P55344 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC3.52□□□□□ -1.85
LIM2P55344 MTCO3P20-201ENST00000454926 688 ntBASIC3.52□□□□□ -1.85
LIM2P55344 CDC42P1-201ENST00000456658 548 ntBASIC3.52□□□□□ -1.85
LIM2P55344 AC022034.3-201ENST00000471393 478 ntBASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 133.7 ms