Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC4.85□□□□□ -1.63
COPAP53621 AL512347.1-201ENST00000566420 503 ntBASIC4.85□□□□□ -1.63
COPAP53621 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC4.85□□□□□ -1.63
COPAP53621 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC4.85□□□□□ -1.63
COPAP53621 AC067852.4-201ENST00000590314 478 ntBASIC4.85□□□□□ -1.63
COPAP53621 AL590229.1-201ENST00000603497 542 ntBASIC4.85□□□□□ -1.63
COPAP53621 AC233280.2-201ENST00000603917 1070 ntBASIC4.85□□□□□ -1.63
COPAP53621 AL121932.1-201ENST00000605542 214 ntBASIC4.85□□□□□ -1.63
COPAP53621 HSPE1P14-201ENST00000605812 302 ntBASIC4.85□□□□□ -1.63
COPAP53621 AC091946.2-201ENST00000606105 291 ntBASIC4.85□□□□□ -1.63
COPAP53621 OR2AS2P-201ENST00000606902 342 ntBASIC4.85□□□□□ -1.63
COPAP53621 AC072039.2-201ENST00000608883 439 ntBASIC4.85□□□□□ -1.63
COPAP53621 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC4.85□□□□□ -1.63
COPAP53621 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC4.85□□□□□ -1.63
COPAP53621 AC245297.2-201ENST00000610119 565 ntBASIC4.85□□□□□ -1.63
COPAP53621 AL731566.2-201ENST00000618971 317 ntBASIC4.85□□□□□ -1.63
COPAP53621 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC4.85□□□□□ -1.63
COPAP53621 AF246928.1-201ENST00000623768 87 ntBASIC4.85□□□□□ -1.63
COPAP53621 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
COPAP53621 EED-206ENST00000527888 1422 ntTSL 2 BASIC4.85□□□□□ -1.63
COPAP53621 AC021755.1-201ENST00000559747 1447 ntBASIC4.85□□□□□ -1.63
COPAP53621 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC4.85□□□□□ -1.63
COPAP53621 AC087359.1-201ENST00000508335 1740 ntBASIC4.85□□□□□ -1.63
COPAP53621 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
COPAP53621 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
COPAP53621 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
COPAP53621 AC092435.4-201ENST00000623012 4159 ntBASIC4.84□□□□□ -1.63
COPAP53621 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.84□□□□□ -1.63
COPAP53621 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.84□□□□□ -1.63
COPAP53621 OFD1P5Y-201ENST00000447585 2590 ntBASIC4.84□□□□□ -1.63
COPAP53621 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.84□□□□□ -1.63
COPAP53621 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
COPAP53621 SNORA4.1-201ENST00000364263 144 ntBASIC4.84□□□□□ -1.63
COPAP53621 RNU6-1293P-201ENST00000384077 107 ntBASIC4.84□□□□□ -1.63
COPAP53621 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.63
COPAP53621 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC4.84□□□□□ -1.63
COPAP53621 LINC00993-201ENST00000420453 540 ntBASIC4.84□□□□□ -1.63
COPAP53621 AC062016.2-201ENST00000420950 676 ntBASIC4.84□□□□□ -1.63
COPAP53621 COX6CP17-201ENST00000421389 185 ntBASIC4.84□□□□□ -1.63
COPAP53621 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC4.84□□□□□ -1.63
COPAP53621 AC009480.2-201ENST00000422916 432 ntBASIC4.84□□□□□ -1.63
COPAP53621 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
COPAP53621 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC4.84□□□□□ -1.63
COPAP53621 VN1R108P-201ENST00000431580 830 ntBASIC4.84□□□□□ -1.63
COPAP53621 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC4.84□□□□□ -1.63
COPAP53621 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC4.84□□□□□ -1.63
COPAP53621 OR4G11P-201ENST00000492842 939 ntBASIC4.84□□□□□ -1.63
COPAP53621 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC4.84□□□□□ -1.63
COPAP53621 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC4.84□□□□□ -1.63
COPAP53621 AK3P4-201ENST00000504283 583 ntBASIC4.84□□□□□ -1.63
COPAP53621 HMGB1P28-201ENST00000507778 552 ntBASIC4.84□□□□□ -1.63
COPAP53621 AC091868.1-201ENST00000508746 304 ntBASIC4.84□□□□□ -1.63
COPAP53621 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC4.84□□□□□ -1.63
COPAP53621 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC4.84□□□□□ -1.63
COPAP53621 SLC2A13P1-201ENST00000531560 322 ntBASIC4.84□□□□□ -1.63
COPAP53621 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC4.84□□□□□ -1.63
COPAP53621 LYZ-203ENST00000549690 669 ntTSL 2 BASIC4.84□□□□□ -1.63
COPAP53621 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC4.84□□□□□ -1.63
COPAP53621 AC084824.1-201ENST00000550917 1005 ntBASIC4.84□□□□□ -1.63
COPAP53621 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
COPAP53621 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC4.84□□□□□ -1.63
COPAP53621 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC4.84□□□□□ -1.63
COPAP53621 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC4.84□□□□□ -1.63
COPAP53621 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC4.84□□□□□ -1.63
COPAP53621 VN1R90P-201ENST00000595717 726 ntBASIC4.84□□□□□ -1.63
COPAP53621 RPL26P30-202ENST00000602923 645 ntBASIC4.84□□□□□ -1.63
COPAP53621 AC010738.1-201ENST00000604970 987 ntBASIC4.84□□□□□ -1.63
COPAP53621 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC4.84□□□□□ -1.63
COPAP53621 AC005962.2-201ENST00000611427 652 ntBASIC4.84□□□□□ -1.63
COPAP53621 AC011939.3-201ENST00000613686 466 ntBASIC4.84□□□□□ -1.63
COPAP53621 AC083809.1-201ENST00000615051 472 ntBASIC4.84□□□□□ -1.63
COPAP53621 RNU6-156P-201ENST00000621869 107 ntBASIC4.84□□□□□ -1.63
COPAP53621 AC098679.5-201ENST00000624394 571 ntBASIC4.84□□□□□ -1.63
COPAP53621 AC120349.2-201ENST00000625002 298 ntBASIC4.84□□□□□ -1.63
COPAP53621 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC4.84□□□□□ -1.63
COPAP53621 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.84□□□□□ -1.64
COPAP53621 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.64
COPAP53621 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.84□□□□□ -1.64
COPAP53621 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.83□□□□□ -1.64
COPAP53621 AL442639.1-201ENST00000625030 1899 ntBASIC4.83□□□□□ -1.64
COPAP53621 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
COPAP53621 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.83□□□□□ -1.64
COPAP53621 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
COPAP53621 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
COPAP53621 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
COPAP53621 KARSP3-201ENST00000571212 1504 ntBASIC4.83□□□□□ -1.64
COPAP53621 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
COPAP53621 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.83□□□□□ -1.64
COPAP53621 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
COPAP53621 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
COPAP53621 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.83□□□□□ -1.64
COPAP53621 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.83□□□□□ -1.64
COPAP53621 HSP90AA5P-201ENST00000438353 2192 ntBASIC4.83□□□□□ -1.64
COPAP53621 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
COPAP53621 SNORD113.2-201ENST00000364166 89 ntBASIC4.83□□□□□ -1.64
COPAP53621 Y_RNA.318-201ENST00000365131 97 ntBASIC4.83□□□□□ -1.64
COPAP53621 SNORA62-201ENST00000365493 153 ntBASIC4.83□□□□□ -1.64
COPAP53621 RNU6-1122P-201ENST00000384449 107 ntBASIC4.83□□□□□ -1.64
COPAP53621 MIR1284-201ENST00000408337 120 ntBASIC4.83□□□□□ -1.64
COPAP53621 RNU2-28P-201ENST00000410457 189 ntBASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms