Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 AP003730.1-201ENST00000524605 285 ntBASIC4.26□□□□□ -1.73
CLCNKAP51800 MTND2P26-201ENST00000528255 1029 ntBASIC4.26□□□□□ -1.73
CLCNKAP51800 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC4.26□□□□□ -1.73
CLCNKAP51800 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.26□□□□□ -1.73
CLCNKAP51800 AC004217.3-201ENST00000551552 878 ntBASIC4.26□□□□□ -1.73
CLCNKAP51800 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC4.26□□□□□ -1.73
CLCNKAP51800 PARP1P2-201ENST00000556806 195 ntBASIC4.26□□□□□ -1.73
CLCNKAP51800 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC4.26□□□□□ -1.73
CLCNKAP51800 ATP5J2P6-201ENST00000565203 266 ntBASIC4.26□□□□□ -1.73
CLCNKAP51800 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CLCNKAP51800 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC4.26□□□□□ -1.73
CLCNKAP51800 AC023575.1-201ENST00000580510 358 ntBASIC4.26□□□□□ -1.73
CLCNKAP51800 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC4.26□□□□□ -1.73
CLCNKAP51800 AL390816.3-201ENST00000604527 1066 ntBASIC4.26□□□□□ -1.73
CLCNKAP51800 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.26□□□□□ -1.73
CLCNKAP51800 AC097478.2-201ENST00000610572 514 ntBASIC4.26□□□□□ -1.73
CLCNKAP51800 FAM27D1-201ENST00000612308 341 ntBASIC4.26□□□□□ -1.73
CLCNKAP51800 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC4.26□□□□□ -1.73
CLCNKAP51800 AL445567.2-201ENST00000618935 498 ntBASIC4.26□□□□□ -1.73
CLCNKAP51800 AC022509.4-201ENST00000621404 572 ntBASIC4.26□□□□□ -1.73
CLCNKAP51800 AC131159.1-201ENST00000621854 213 ntBASIC4.26□□□□□ -1.73
CLCNKAP51800 FP325313.1-201ENST00000638228 703 ntBASIC4.26□□□□□ -1.73
CLCNKAP51800 OR52H1-202ENST00000641796 1061 ntBASIC4.26□□□□□ -1.73
CLCNKAP51800 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
CLCNKAP51800 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
CLCNKAP51800 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
CLCNKAP51800 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CLCNKAP51800 AC012321.1-201ENST00000561622 1588 ntBASIC4.26□□□□□ -1.73
CLCNKAP51800 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CLCNKAP51800 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CLCNKAP51800 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CLCNKAP51800 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.26□□□□□ -1.73
CLCNKAP51800 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CLCNKAP51800 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
CLCNKAP51800 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CLCNKAP51800 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
CLCNKAP51800 RNA5SP175-201ENST00000364275 119 ntBASIC4.25□□□□□ -1.73
CLCNKAP51800 CASP3-203ENST00000393588 677 ntTSL 4 BASIC4.25□□□□□ -1.73
CLCNKAP51800 AL583835.1-201ENST00000399570 407 ntBASIC4.25□□□□□ -1.73
CLCNKAP51800 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.25□□□□□ -1.73
CLCNKAP51800 AMMECR1LP1-201ENST00000415152 841 ntBASIC4.25□□□□□ -1.73
CLCNKAP51800 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC4.25□□□□□ -1.73
CLCNKAP51800 PDSS1P1-201ENST00000422953 1114 ntBASIC4.25□□□□□ -1.73
CLCNKAP51800 EIF1P3-201ENST00000423841 334 ntBASIC4.25□□□□□ -1.73
CLCNKAP51800 DPRXP1-201ENST00000426312 460 ntBASIC4.25□□□□□ -1.73
CLCNKAP51800 RSL24D1P6-201ENST00000426934 401 ntBASIC4.25□□□□□ -1.73
CLCNKAP51800 MTCO1P54-201ENST00000430139 712 ntBASIC4.25□□□□□ -1.73
CLCNKAP51800 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC4.25□□□□□ -1.73
CLCNKAP51800 AC093155.1-201ENST00000440164 826 ntBASIC4.25□□□□□ -1.73
CLCNKAP51800 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CLCNKAP51800 RPL37P3-201ENST00000456825 293 ntBASIC4.25□□□□□ -1.73
CLCNKAP51800 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC4.25□□□□□ -1.73
CLCNKAP51800 UQCRHP4-201ENST00000471686 272 ntBASIC4.25□□□□□ -1.73
CLCNKAP51800 AC090013.1-201ENST00000485147 480 ntBASIC4.25□□□□□ -1.73
CLCNKAP51800 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.25□□□□□ -1.73
CLCNKAP51800 RPL5P23-201ENST00000496040 868 ntBASIC4.25□□□□□ -1.73
CLCNKAP51800 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CLCNKAP51800 AC011352.3-201ENST00000505162 593 ntBASIC4.25□□□□□ -1.73
CLCNKAP51800 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC4.25□□□□□ -1.73
CLCNKAP51800 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CLCNKAP51800 AP001317.1-201ENST00000531194 960 ntBASIC4.25□□□□□ -1.73
CLCNKAP51800 ERP27-202ENST00000540097 993 ntTSL 2 BASIC4.25□□□□□ -1.73
CLCNKAP51800 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC4.25□□□□□ -1.73
CLCNKAP51800 NBEAP1-201ENST00000554452 979 ntBASIC4.25□□□□□ -1.73
CLCNKAP51800 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.25□□□□□ -1.73
CLCNKAP51800 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC4.25□□□□□ -1.73
CLCNKAP51800 AGGF1P6-201ENST00000569213 976 ntBASIC4.25□□□□□ -1.73
CLCNKAP51800 AC008088.1-201ENST00000580993 280 ntBASIC4.25□□□□□ -1.73
CLCNKAP51800 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC4.25□□□□□ -1.73
CLCNKAP51800 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.25□□□□□ -1.73
CLCNKAP51800 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC4.25□□□□□ -1.73
CLCNKAP51800 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC4.25□□□□□ -1.73
CLCNKAP51800 AL133507.1-201ENST00000605269 557 ntBASIC4.25□□□□□ -1.73
CLCNKAP51800 ARF4P1-201ENST00000605447 541 ntBASIC4.25□□□□□ -1.73
CLCNKAP51800 AC069545.1-201ENST00000605671 358 ntBASIC4.25□□□□□ -1.73
CLCNKAP51800 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC4.25□□□□□ -1.73
CLCNKAP51800 AC078883.4-201ENST00000623218 367 ntBASIC4.25□□□□□ -1.73
CLCNKAP51800 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC4.25□□□□□ -1.73
CLCNKAP51800 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.25□□□□□ -1.73
CLCNKAP51800 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
CLCNKAP51800 AC027290.2-201ENST00000623210 18662 ntBASIC4.25□□□□□ -1.73
CLCNKAP51800 AC134882.1-201ENST00000603738 1676 ntBASIC4.25□□□□□ -1.73
CLCNKAP51800 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC4.25□□□□□ -1.73
CLCNKAP51800 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC4.25□□□□□ -1.73
CLCNKAP51800 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.25□□□□□ -1.73
CLCNKAP51800 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
CLCNKAP51800 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CLCNKAP51800 API5-210ENST00000534600 1760 ntTSL 5 BASIC4.25□□□□□ -1.73
CLCNKAP51800 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CLCNKAP51800 AL158163.1-201ENST00000603915 1649 ntBASIC4.24□□□□□ -1.73
CLCNKAP51800 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
CLCNKAP51800 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CLCNKAP51800 OR11H5P-202ENST00000641612 1325 ntBASIC4.24□□□□□ -1.73
CLCNKAP51800 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.24□□□□□ -1.73
CLCNKAP51800 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.24□□□□□ -1.73
CLCNKAP51800 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.24□□□□□ -1.73
CLCNKAP51800 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.24□□□□□ -1.73
CLCNKAP51800 USP44-208ENST00000552440 1818 ntTSL 5 BASIC4.24□□□□□ -1.73
CLCNKAP51800 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CLCNKAP51800 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 141.1 ms