Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 FAM133DP-201ENST00000464802 691 ntBASIC3.08□□□□□ -1.92
SRP9P49458 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC3.08□□□□□ -1.92
SRP9P49458 RNU1-95P-201ENST00000516357 160 ntBASIC3.08□□□□□ -1.92
SRP9P49458 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.08□□□□□ -1.92
SRP9P49458 RNU1-128P-201ENST00000516704 160 ntBASIC3.08□□□□□ -1.92
SRP9P49458 SOD1P3-201ENST00000518682 454 ntBASIC3.08□□□□□ -1.92
SRP9P49458 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC3.08□□□□□ -1.92
SRP9P49458 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.08□□□□□ -1.92
SRP9P49458 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
SRP9P49458 AC026333.2-201ENST00000542164 106 ntBASIC3.08□□□□□ -1.92
SRP9P49458 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC3.08□□□□□ -1.92
SRP9P49458 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.08□□□□□ -1.92
SRP9P49458 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.08□□□□□ -1.92
SRP9P49458 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC3.08□□□□□ -1.92
SRP9P49458 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC3.08□□□□□ -1.92
SRP9P49458 AC006077.1-201ENST00000604746 343 ntBASIC3.08□□□□□ -1.92
SRP9P49458 RNA5SP108-201ENST00000605921 117 ntBASIC3.08□□□□□ -1.92
SRP9P49458 AL451074.6-201ENST00000608512 729 ntBASIC3.08□□□□□ -1.92
SRP9P49458 AC105429.2-201ENST00000610567 517 ntBASIC3.08□□□□□ -1.92
SRP9P49458 MIR7851-201ENST00000610611 160 ntBASIC3.08□□□□□ -1.92
SRP9P49458 AL121772.2-201ENST00000614331 297 ntBASIC3.08□□□□□ -1.92
SRP9P49458 AC092184.1-201ENST00000625042 715 ntBASIC3.08□□□□□ -1.92
SRP9P49458 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
SRP9P49458 NMD3P1-201ENST00000439704 1488 ntBASIC3.08□□□□□ -1.92
SRP9P49458 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.08□□□□□ -1.92
SRP9P49458 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
SRP9P49458 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
SRP9P49458 ZNF285B-201ENST00000561698 1767 ntBASIC3.07□□□□□ -1.92
SRP9P49458 RNU6-805P-201ENST00000365643 106 ntBASIC3.07□□□□□ -1.92
SRP9P49458 SNORD3H-201ENST00000384486 214 ntBASIC3.07□□□□□ -1.92
SRP9P49458 MIR153-1-201ENST00000384914 90 ntBASIC3.07□□□□□ -1.92
SRP9P49458 RPL7P60-201ENST00000397636 735 ntBASIC3.07□□□□□ -1.92
SRP9P49458 RPL23AP47-201ENST00000408017 460 ntBASIC3.07□□□□□ -1.92
SRP9P49458 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.07□□□□□ -1.92
SRP9P49458 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC3.07□□□□□ -1.92
SRP9P49458 AC093578.1-201ENST00000415219 368 ntBASIC3.07□□□□□ -1.92
SRP9P49458 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC3.07□□□□□ -1.92
SRP9P49458 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC3.07□□□□□ -1.92
SRP9P49458 HMGN1P18-201ENST00000457642 277 ntBASIC3.07□□□□□ -1.92
SRP9P49458 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC3.07□□□□□ -1.92
SRP9P49458 AC023598.1-201ENST00000472521 361 ntBASIC3.07□□□□□ -1.92
SRP9P49458 AP000563.1-201ENST00000490865 758 ntBASIC3.07□□□□□ -1.92
SRP9P49458 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC3.07□□□□□ -1.92
SRP9P49458 AC114967.1-201ENST00000504890 259 ntBASIC3.07□□□□□ -1.92
SRP9P49458 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC3.07□□□□□ -1.92
SRP9P49458 SAP18P1-201ENST00000512058 390 ntBASIC3.07□□□□□ -1.92
SRP9P49458 SNORA70.17-201ENST00000516449 133 ntBASIC3.07□□□□□ -1.92
SRP9P49458 SNORA64.4-201ENST00000516632 81 ntBASIC3.07□□□□□ -1.92
SRP9P49458 TRMT10BP1-201ENST00000519377 943 ntBASIC3.07□□□□□ -1.92
SRP9P49458 NAT2-202ENST00000520116 716 ntTSL 3 BASIC3.07□□□□□ -1.92
SRP9P49458 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.07□□□□□ -1.92
SRP9P49458 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.07□□□□□ -1.92
SRP9P49458 AC004024.1-201ENST00000549244 247 ntBASIC3.07□□□□□ -1.92
SRP9P49458 SYF2P1-201ENST00000550658 413 ntBASIC3.07□□□□□ -1.92
SRP9P49458 AC034105.4-201ENST00000568304 277 ntBASIC3.07□□□□□ -1.92
SRP9P49458 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC3.07□□□□□ -1.92
SRP9P49458 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC3.07□□□□□ -1.92
SRP9P49458 AC015849.6-201ENST00000605454 474 ntBASIC3.07□□□□□ -1.92
SRP9P49458 AC004832.5-201ENST00000608677 401 ntBASIC3.07□□□□□ -1.92
SRP9P49458 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.07□□□□□ -1.92
SRP9P49458 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
SRP9P49458 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.07□□□□□ -1.92
SRP9P49458 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.06□□□□□ -1.92
SRP9P49458 RNA5SP51-201ENST00000364750 119 ntBASIC3.06□□□□□ -1.92
SRP9P49458 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC3.06□□□□□ -1.92
SRP9P49458 SNORA5A-201ENST00000384111 134 ntBASIC3.06□□□□□ -1.92
SRP9P49458 AL034403.1-201ENST00000399414 885 ntBASIC3.06□□□□□ -1.92
SRP9P49458 RN7SKP222-201ENST00000410651 315 ntBASIC3.06□□□□□ -1.92
SRP9P49458 RANP4-201ENST00000413361 655 ntBASIC3.06□□□□□ -1.92
SRP9P49458 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.06□□□□□ -1.92
SRP9P49458 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.06□□□□□ -1.92
SRP9P49458 RPL7P46-201ENST00000425129 740 ntBASIC3.06□□□□□ -1.92
SRP9P49458 BX890604.2-201ENST00000427883 474 ntBASIC3.06□□□□□ -1.92
SRP9P49458 FER-202ENST00000438717 1531 ntTSL 2 BASIC3.06□□□□□ -1.92
SRP9P49458 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC3.06□□□□□ -1.92
SRP9P49458 TRIM60P18-201ENST00000441518 828 ntBASIC3.06□□□□□ -1.92
SRP9P49458 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.06□□□□□ -1.92
SRP9P49458 RPS27AP1-201ENST00000475545 471 ntBASIC3.06□□□□□ -1.92
SRP9P49458 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.06□□□□□ -1.92
SRP9P49458 AL133372.1-201ENST00000493565 745 ntBASIC3.06□□□□□ -1.92
SRP9P49458 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC3.06□□□□□ -1.92
SRP9P49458 TMEM248P1-201ENST00000510579 951 ntBASIC3.06□□□□□ -1.92
SRP9P49458 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC3.06□□□□□ -1.92
SRP9P49458 RNU2-27P-201ENST00000516185 142 ntBASIC3.06□□□□□ -1.92
SRP9P49458 RNU6-579P-201ENST00000516879 102 ntBASIC3.06□□□□□ -1.92
SRP9P49458 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC3.06□□□□□ -1.92
SRP9P49458 TBCA-206ENST00000518338 551 ntTSL 2 BASIC3.06□□□□□ -1.92
SRP9P49458 AC104027.1-201ENST00000521887 300 ntBASIC3.06□□□□□ -1.92
SRP9P49458 AC007991.1-201ENST00000522680 631 ntBASIC3.06□□□□□ -1.92
SRP9P49458 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.06□□□□□ -1.92
SRP9P49458 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC3.06□□□□□ -1.92
SRP9P49458 DUXAP6-201ENST00000553858 601 ntBASIC3.06□□□□□ -1.92
SRP9P49458 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.06□□□□□ -1.92
SRP9P49458 AC090337.1-201ENST00000579651 2074 ntBASIC3.06□□□□□ -1.92
SRP9P49458 AP000919.1-202ENST00000581139 1264 ntBASIC3.06□□□□□ -1.92
SRP9P49458 AC006116.10-201ENST00000591836 581 ntBASIC3.06□□□□□ -1.92
SRP9P49458 AC020914.6-201ENST00000594327 272 ntBASIC3.06□□□□□ -1.92
SRP9P49458 AL133393.1-201ENST00000603277 287 ntBASIC3.06□□□□□ -1.92
SRP9P49458 AC091488.1-201ENST00000604239 660 ntBASIC3.06□□□□□ -1.92
SRP9P49458 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 127.7 ms