Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC4.4□□□□□ -1.71
HADHAP40939 AL352979.3-201ENST00000553515 247 ntBASIC4.4□□□□□ -1.71
HADHAP40939 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
HADHAP40939 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC4.4□□□□□ -1.71
HADHAP40939 AGGF1P8-201ENST00000562979 1000 ntBASIC4.4□□□□□ -1.71
HADHAP40939 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
HADHAP40939 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
HADHAP40939 AC016877.3-201ENST00000606778 504 ntBASIC4.4□□□□□ -1.71
HADHAP40939 AL445423.1-201ENST00000609941 536 ntBASIC4.4□□□□□ -1.71
HADHAP40939 AC026368.1-201ENST00000614934 690 ntBASIC4.4□□□□□ -1.71
HADHAP40939 AC006338.2-201ENST00000616864 791 ntBASIC4.4□□□□□ -1.71
HADHAP40939 AL731566.2-201ENST00000618971 317 ntBASIC4.4□□□□□ -1.71
HADHAP40939 C2orf27A-204ENST00000623058 969 ntBASIC4.4□□□□□ -1.71
HADHAP40939 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
HADHAP40939 PABPC1P7-201ENST00000413177 1513 ntBASIC4.4□□□□□ -1.71
HADHAP40939 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.39□□□□□ -1.71
HADHAP40939 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC4.39□□□□□ -1.71
HADHAP40939 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
HADHAP40939 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
HADHAP40939 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
HADHAP40939 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.39□□□□□ -1.71
HADHAP40939 OR5P1P-201ENST00000299512 925 ntBASIC4.39□□□□□ -1.71
HADHAP40939 RNA5SP52-201ENST00000362448 134 ntBASIC4.39□□□□□ -1.71
HADHAP40939 RNU4-68P-201ENST00000364314 141 ntBASIC4.39□□□□□ -1.71
HADHAP40939 RNU6-413P-201ENST00000384115 107 ntBASIC4.39□□□□□ -1.71
HADHAP40939 RNU6-1226P-201ENST00000384317 107 ntBASIC4.39□□□□□ -1.71
HADHAP40939 Y_RNA.472-201ENST00000384322 102 ntBASIC4.39□□□□□ -1.71
HADHAP40939 MIR1911-201ENST00000410783 80 ntBASIC4.39□□□□□ -1.71
HADHAP40939 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.39□□□□□ -1.71
HADHAP40939 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC4.39□□□□□ -1.71
HADHAP40939 AMMECR1LP1-201ENST00000415152 841 ntBASIC4.39□□□□□ -1.71
HADHAP40939 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC4.39□□□□□ -1.71
HADHAP40939 BOLA3P4-201ENST00000418151 400 ntBASIC4.39□□□□□ -1.71
HADHAP40939 AC092634.6-201ENST00000418558 192 ntBASIC4.39□□□□□ -1.71
HADHAP40939 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC4.39□□□□□ -1.71
HADHAP40939 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC4.39□□□□□ -1.71
HADHAP40939 AL513175.2-201ENST00000422071 443 ntBASIC4.39□□□□□ -1.71
HADHAP40939 EIF1P3-201ENST00000423841 334 ntBASIC4.39□□□□□ -1.71
HADHAP40939 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC4.39□□□□□ -1.71
HADHAP40939 AC092648.1-201ENST00000425870 423 ntBASIC4.39□□□□□ -1.71
HADHAP40939 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC4.39□□□□□ -1.71
HADHAP40939 AL732292.1-201ENST00000426692 226 ntBASIC4.39□□□□□ -1.71
HADHAP40939 OR51AB1P-201ENST00000429046 620 ntBASIC4.39□□□□□ -1.71
HADHAP40939 AL035246.1-201ENST00000433554 1255 ntBASIC4.39□□□□□ -1.71
HADHAP40939 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.39□□□□□ -1.71
HADHAP40939 HLA-N-201ENST00000437516 135 ntBASIC4.39□□□□□ -1.71
HADHAP40939 AC007327.1-201ENST00000447461 264 ntBASIC4.39□□□□□ -1.71
HADHAP40939 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC4.39□□□□□ -1.71
HADHAP40939 OFD1P7Y-201ENST00000454643 1155 ntBASIC4.39□□□□□ -1.71
HADHAP40939 AC092155.2-201ENST00000454675 477 ntBASIC4.39□□□□□ -1.71
HADHAP40939 DHFRP3-201ENST00000455595 559 ntBASIC4.39□□□□□ -1.71
HADHAP40939 SNRPGP5-201ENST00000456003 220 ntBASIC4.39□□□□□ -1.71
HADHAP40939 TRBV26-201ENST00000456572 344 ntBASIC4.39□□□□□ -1.71
HADHAP40939 MTCO3P2-201ENST00000457365 171 ntBASIC4.39□□□□□ -1.71
HADHAP40939 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC4.39□□□□□ -1.71
HADHAP40939 AC010301.1-201ENST00000473936 355 ntBASIC4.39□□□□□ -1.71
HADHAP40939 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC4.39□□□□□ -1.71
HADHAP40939 AC134050.1-201ENST00000495088 933 ntBASIC4.39□□□□□ -1.71
HADHAP40939 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC4.39□□□□□ -1.71
HADHAP40939 RNA5SP154-201ENST00000516193 111 ntBASIC4.39□□□□□ -1.71
HADHAP40939 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC4.39□□□□□ -1.71
HADHAP40939 AC087808.1-201ENST00000520501 361 ntBASIC4.39□□□□□ -1.71
HADHAP40939 IFITM8P-201ENST00000522529 394 ntBASIC4.39□□□□□ -1.71
HADHAP40939 AP000790.1-201ENST00000528891 737 ntBASIC4.39□□□□□ -1.71
HADHAP40939 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC4.39□□□□□ -1.71
HADHAP40939 OR4A45P-201ENST00000529954 901 ntBASIC4.39□□□□□ -1.71
HADHAP40939 ZNF705CP-201ENST00000530515 889 ntBASIC4.39□□□□□ -1.71
HADHAP40939 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC4.39□□□□□ -1.71
HADHAP40939 ASB8-204ENST00000536071 568 ntTSL 4 BASIC4.39□□□□□ -1.71
HADHAP40939 AC007424.1-203ENST00000554613 687 ntBASIC4.39□□□□□ -1.71
HADHAP40939 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC4.39□□□□□ -1.71
HADHAP40939 SULT1C2P1-202ENST00000562418 459 ntBASIC4.39□□□□□ -1.71
HADHAP40939 MTND3P13-201ENST00000574391 343 ntBASIC4.39□□□□□ -1.71
HADHAP40939 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
HADHAP40939 GAS5-AS1-201ENST00000602767 694 ntBASIC4.39□□□□□ -1.71
HADHAP40939 HSPE1P14-201ENST00000605812 302 ntBASIC4.39□□□□□ -1.71
HADHAP40939 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC4.39□□□□□ -1.71
HADHAP40939 AC106052.1-201ENST00000608029 497 ntBASIC4.39□□□□□ -1.71
HADHAP40939 AL031666.3-201ENST00000609320 1006 ntBASIC4.39□□□□□ -1.71
HADHAP40939 AL050303.3-201ENST00000613704 284 ntBASIC4.39□□□□□ -1.71
HADHAP40939 AC023158.2-201ENST00000614876 543 ntBASIC4.39□□□□□ -1.71
HADHAP40939 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.39□□□□□ -1.71
HADHAP40939 AC006065.5-201ENST00000623427 349 ntBASIC4.39□□□□□ -1.71
HADHAP40939 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
HADHAP40939 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
HADHAP40939 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.39□□□□□ -1.71
HADHAP40939 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
HADHAP40939 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
HADHAP40939 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
HADHAP40939 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
HADHAP40939 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC4.38□□□□□ -1.71
HADHAP40939 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
HADHAP40939 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.38□□□□□ -1.71
HADHAP40939 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
HADHAP40939 MIR448-201ENST00000362131 111 ntBASIC4.38□□□□□ -1.71
HADHAP40939 RNU1-130P-201ENST00000363930 160 ntBASIC4.38□□□□□ -1.71
HADHAP40939 RPL31-204ENST00000409038 817 ntTSL 2 BASIC4.38□□□□□ -1.71
HADHAP40939 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC4.38□□□□□ -1.71
HADHAP40939 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.38□□□□□ -1.71
HADHAP40939 MTND4P22-201ENST00000413116 1169 ntBASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 76.7 ms